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A6M1T6 (ARAA_CLOB8) Reviewed, UniProtKB/Swiss-Prot

Last modified January 25, 2012. Version 31. Feed History...

Clusters with 100%, 90%, 50% identity | Documents (2) | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein namesRecommended name:
L-arabinose isomerase
EC=5.3.1.4
Gene names
Name:araA
Ordered Locus Names:Cbei_4457
OrganismClostridium beijerinckii (strain ATCC 51743 / NCIMB 8052) (Clostridium acetobutylicum) [Complete proteome] [HAMAP]
Taxonomic identifier290402 [NCBI]
Taxonomic lineageBacteria › Firmicutes › Clostridia › Clostridiales › Clostridiaceae › Clostridium

Protein attributes

Sequence length489 AA.
Sequence statusComplete.
Protein existenceInferred from homology

General annotation (Comments)

Function

Catalyzes the conversion of L-arabinose to L-ribulose By similarity. HAMAP MF_00519

Catalytic activity

L-arabinose = L-ribulose. HAMAP MF_00519

Cofactor

Binds 1 manganese ion per subunit By similarity. HAMAP MF_00519

Pathway

Carbohydrate degradation; L-arabinose degradation via L-ribulose; D-xylulose 5-phosphate from L-arabinose (bacterial route): step 1/3. HAMAP MF_00519

Sequence similarities

Belongs to the arabinose isomerase family.

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Molecule processing

Chain1 – 489489L-arabinose isomerase HAMAP MF_00519
PRO_1000081675

Sites

Metal binding3001Manganese By similarity
Metal binding3251Manganese By similarity
Metal binding3421Manganese By similarity
Metal binding4411Manganese By similarity

Sequences

Sequence LengthMass (Da)Tools
A6M1T6 [UniParc].

Last modified July 24, 2007. Version 1.
Checksum: 4D1BBB1401663165

FASTA48954,313
        10         20         30         40         50         60 
MLKVKNYEFW FITGSQHLYG PEVIEQVSDN SKIIVDELNK KDLPYKIVFK TVATDSPSIR 

        70         80         90        100        110        120 
KVCNDANNDE NCAGIITWMH TFSPAKMWIH GLTELRKPLL HLHTQFNKEI PWGTIDMDFM 

       130        140        150        160        170        180 
NLNQAAHGDR EFGYIGARLD IARKIVVGHW TDASVSADIA KWMAPAVAFT EGHSIKVARF 

       190        200        210        220        230        240 
GDNMRNVAVT DGDRIEAQIK FGWIVDYYGV GDLVKSMDAV TEDQIDELMA EYSKLYDIDP 

       250        260        270        280        290        300 
KASIDSIREQ AKIEIGLRTF LDARGYTAFT TNFEALHGMK QLPGLAVQHL MAEGYGFGAE 

       310        320        330        340        350        360 
GDWKTAALLR AMKIMASGKG TGLMEDYTYN MDSENGLILG AHMLEICPTL AATKPVIEVH 

       370        380        390        400        410        420 
PLGIGGKEDP ARLVFKGASG PAVAASLIDM GNRFRLIVNS VDCVEVTEDM PNLPVASVLW 

       430        440        450        460        470        480 
KPQPSLKEGA KAWIMAGGAH HTSFSFYVDE EQLLDWADMV GVECVVINND TKLSTFKNEL 


KFSSTAWKF

« Hide

Cross-references

Sequence databases

EMBL
GenBank
DDBJ		CP000721 Genomic DNA. Translation: ABR36566.1.
RefSeqYP_001311522.1. NC_009617.1.

3D structure databases

ProteinModelPortalA6M1T6.
SMRA6M1T6. Positions 1-489.
ModBaseSearch...

Protein-protein interaction databases

STRINGA6M1T6.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

GeneID5295612.
GenomeReviewsGene locus Cbei_4457 in contig CP000721_GR.
KEGGcbe:Cbei_4457.
PATRIC19353228. VBICloBei69853_4629.

Organism-specific databases

CMRSearch...

Phylogenomic databases

eggNOGCOG2160.
HOGENOMHBG297198.
OMAEVCPTIA.
ProtClustDBPRK02929.

Enzyme and pathway databases

BioCycCBEI290402:CBEI_4457-MONOMER.

Family and domain databases

HAMAPMF_00519. Arabinose_Isome.
[Tree]
InterProIPR024664. Ara_Isoase_C.
IPR004216. Fuc/Ara_isomerase_C.
IPR009015. Fucose_isomerase_N/cen.
IPR003762. Lara_isomerase.
[Graphical view]
KOK01804.
PfamPF11762. Arabinose_Iso_C. 1 hit.
PF02610. Arabinose_Isome. 1 hit.
[Graphical view]
PIRSFPIRSF001478. L-ara_isomerase. 1 hit.
ProDomPD018364. Lara_isomerase. 1 hit.
[Graphical view] [Entries sharing at least one domain]
SUPFAMSSF50443. Fuc_isomerase_C. 1 hit.
SSF53743. Fuc_isomerase_N. 1 hit.
ProtoNetSearch...

Entry information

Entry nameARAA_CLOB8
AccessionPrimary (citable) accession number: A6M1T6
Entry history
Integrated into UniProtKB/Swiss-Prot: May 20, 2008
Last sequence update: July 24, 2007
Last modified: January 25, 2012
This is version 31 of the entry and version 1 of the sequence. [Complete history]
Entry statusReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Relevant documents

PATHWAY comments

Index of metabolic and biosynthesis pathways

SIMILARITY comments

Index of protein domains and families

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