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A6M0X2

- DEOD_CLOB8

UniProt

A6M0X2 - DEOD_CLOB8

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Protein
Purine nucleoside phosphorylase DeoD-type
Gene
deoD, Cbei_4142
Organism
Clostridium beijerinckii (strain ATCC 51743 / NCIMB 8052) (Clostridium acetobutylicum)
Status
Reviewed - Annotation score: 2 out of 5 - Protein inferred from homologyi

Functioni

Catalytic activityi

Purine nucleoside + phosphate = purine + alpha-D-ribose 1-phosphate.UniRule annotation
Purine deoxynucleoside + phosphate = purine + 2'-deoxy-alpha-D-ribose 1-phosphate.UniRule annotation

GO - Molecular functioni

  1. purine-nucleoside phosphorylase activity Source: UniProtKB-HAMAP

GO - Biological processi

  1. purine nucleoside metabolic process Source: UniProtKB-HAMAP
Complete GO annotation...

Keywords - Molecular functioni

Glycosyltransferase, Transferase

Enzyme and pathway databases

BioCyciCBEI290402:GHL5-4244-MONOMER.

Names & Taxonomyi

Protein namesi
Recommended name:
Purine nucleoside phosphorylase DeoD-type (EC:2.4.2.1)
Short name:
PNP
Gene namesi
Name:deoD
Ordered Locus Names:Cbei_4142
OrganismiClostridium beijerinckii (strain ATCC 51743 / NCIMB 8052) (Clostridium acetobutylicum)
Taxonomic identifieri290402 [NCBI]
Taxonomic lineageiBacteriaFirmicutesClostridiaClostridialesClostridiaceaeClostridium
ProteomesiUP000000565: Chromosome

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Chaini1 – 237237Purine nucleoside phosphorylase DeoD-typeUniRule annotation
PRO_0000335596Add
BLAST

Interactioni

Subunit structurei

Homohexamer By similarity.UniRule annotation

Protein-protein interaction databases

STRINGi290402.Cbei_4142.

Structurei

3D structure databases

ProteinModelPortaliA6M0X2.
SMRiA6M0X2. Positions 1-230.

Family & Domainsi

Sequence similaritiesi

Phylogenomic databases

eggNOGiCOG0813.
HOGENOMiHOG000274896.
KOiK03784.
OMAiVSDHFVT.
OrthoDBiEOG6BKJC5.

Family and domain databases

Gene3Di3.40.50.1580. 1 hit.
HAMAPiMF_01627. Pur_nucleosid_phosp.
InterProiIPR004402. DeoD-type.
IPR018017. Nucleoside_phosphorylase.
IPR018016. Nucleoside_phosphorylase_CS.
IPR000845. Nucleoside_phosphorylase_d.
[Graphical view]
PANTHERiPTHR21234. PTHR21234. 1 hit.
PfamiPF01048. PNP_UDP_1. 1 hit.
[Graphical view]
SUPFAMiSSF53167. SSF53167. 1 hit.
TIGRFAMsiTIGR00107. deoD. 1 hit.
PROSITEiPS01232. PNP_UDP_1. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

A6M0X2-1 [UniParc]FASTAAdd to Basket

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MSVHINAPEG AIAESVLLPG DPLRAKFIAE NFLEDVVCYN EVRGMYGFTG    50
TYKGKKISVQ GTGMGIPSIS IYANELIQSY GVKNLIRVGT CGGYSEKVKV 100
RDLIIAMSAS TDSNLNLVRF QGRTFAPTAS FELLKPAYDI AVEKGFDPKV 150
GSIYSSDVFY GDDDEDWKKW AKFGCLGVEM EAAALYTIAA KFGVNALALL 200
TVSDHFVTGE VTSAEERQLT FTNMMEVALD TIAKIEN 237
Length:237
Mass (Da):25,802
Last modified:July 24, 2007 - v1
Checksum:iBE340E0B14DF5976
GO

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
CP000721 Genomic DNA. Translation: ABR36252.1.
RefSeqiYP_001311208.1. NC_009617.1.

Genome annotation databases

EnsemblBacteriaiABR36252; ABR36252; Cbei_4142.
GeneIDi5295298.
KEGGicbe:Cbei_4142.
PATRICi19352568. VBICloBei69853_4299.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
CP000721 Genomic DNA. Translation: ABR36252.1 .
RefSeqi YP_001311208.1. NC_009617.1.

3D structure databases

ProteinModelPortali A6M0X2.
SMRi A6M0X2. Positions 1-230.
ModBasei Search...
MobiDBi Search...

Protein-protein interaction databases

STRINGi 290402.Cbei_4142.

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

EnsemblBacteriai ABR36252 ; ABR36252 ; Cbei_4142 .
GeneIDi 5295298.
KEGGi cbe:Cbei_4142.
PATRICi 19352568. VBICloBei69853_4299.

Phylogenomic databases

eggNOGi COG0813.
HOGENOMi HOG000274896.
KOi K03784.
OMAi VSDHFVT.
OrthoDBi EOG6BKJC5.

Enzyme and pathway databases

BioCyci CBEI290402:GHL5-4244-MONOMER.

Family and domain databases

Gene3Di 3.40.50.1580. 1 hit.
HAMAPi MF_01627. Pur_nucleosid_phosp.
InterProi IPR004402. DeoD-type.
IPR018017. Nucleoside_phosphorylase.
IPR018016. Nucleoside_phosphorylase_CS.
IPR000845. Nucleoside_phosphorylase_d.
[Graphical view ]
PANTHERi PTHR21234. PTHR21234. 1 hit.
Pfami PF01048. PNP_UDP_1. 1 hit.
[Graphical view ]
SUPFAMi SSF53167. SSF53167. 1 hit.
TIGRFAMsi TIGR00107. deoD. 1 hit.
PROSITEi PS01232. PNP_UDP_1. 1 hit.
[Graphical view ]
ProtoNeti Search...

Publicationsi

  1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: ATCC 51743 / NCIMB 8052.

Entry informationi

Entry nameiDEOD_CLOB8
AccessioniPrimary (citable) accession number: A6M0X2
Entry historyi
Integrated into UniProtKB/Swiss-Prot: May 20, 2008
Last sequence update: July 24, 2007
Last modified: May 14, 2014
This is version 50 of the entry and version 1 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome

Documents

  1. SIMILARITY comments
    Index of protein domains and families

External Data

Dasty 3

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