Skip Header

Contribute Send feedback
Read comments (?) or add your own

A6M0V6 (A6M0V6_CLOB8) Unreviewed, UniProtKB/TrEMBL

Last modified December 14, 2011. Version 26. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
to top of pageNames·Attributes·Ontologies·Sequences·References·Cross-refs·Entry infoCustomize order
to top of pageNames·Attributes·Ontologies·Sequences·References·Cross-refs·Entry infoCustomize order

Names and origin

Protein namesSubmitted name:
Alpha-N-arabinofuranosidase EMBL ABR36236.1
EC=3.2.1.55 EMBL ABR36236.1
Gene names
Ordered Locus Names:Cbei_4126
OrganismClostridium beijerinckii (strain ATCC 51743 / NCIMB 8052) (Clostridium acetobutylicum) [Complete proteome] [HAMAP] EMBL ABR36236.1
Taxonomic identifier290402 [NCBI]
Taxonomic lineageBacteria › Firmicutes › Clostridia › Clostridiales › Clostridiaceae › Clostridium

Protein attributes

Sequence length553 AA.
Sequence statusComplete.
Protein existencePredicted

Ontologies

Keywords
   Molecular functionGlycosidase EMBL ABR36236.1
Hydrolase
   Technical termComplete proteome
Gene Ontology (GO)
   Biological processcarbohydrate metabolic process

Inferred from electronic annotation. Source: InterPro

   Molecular functionalpha-N-arabinofuranosidase activity

Inferred from electronic annotation. Source: EC

Complete GO annotation...

Sequences

Sequence LengthMass (Da)Tools
A6M0V6 [UniParc].

Last modified July 24, 2007. Version 1.
Checksum: B3C1D71C207935B6

FASTA55363,337
        10         20         30         40         50         60 
MMKIKNPILR GFNPDPSICR VGEDYYIAVS TFEWFPGVQI YHSKDLINWN LVAHPLNRIS 

        70         80         90        100        110        120 
QLDMKGNADS GGIWAPCLSY SDNKFWLIYT DVKVTKGIWK DCYNYLVTCE TIDGDWSEPV 

       130        140        150        160        170        180 
KLNGSGFDPS LFHDKNGKKY LLNMLFDNRV YNHRFAGIVM QEYSPEEEKL IGESKLIFKG 

       190        200        210        220        230        240 
TDLKLTEGPH LYQIGDYYYL LTAEGGTKYE HAATIARSKN IEGPYEIHPD NPILTAWDKP 

       250        260        270        280        290        300 
RNELQKCGHA SIVHTHTDEW YLVHLTGRPL PSDEVPGTEV RGYDKETGKP LPHIAPRGYC 

       310        320        330        340        350        360 
PLGRETAIQK LEWIDGWPYV VGGKEGSIEI DAPNMKEVKW EPSFKELDHF DNDKLNINFQ 

       370        380        390        400        410        420 
SLRIPLTEDI MSLTENPGNM RLYGKESLIS KFTQALVARR WQSFNFDAAT GVSFNPDTFQ 

       430        440        450        460        470        480 
QSAGLVCYYN TENWTTIDVT WNEEKGRVID IISCDNFEFS QPLAQNMITV PENVEYVHLK 

       490        500        510        520        530        540 
VEVRVEEYKF FYSFDGVEWK EIPTSFESKK LSDDYVGGGA CFTGAFVGMH CQDVSGNNKS 

       550 
ADFDYFMHKE NLI

« Hide

References

[1]"Complete sequence of Clostridium beijerinckii NCIMB 8052."
Copeland A., Lucas S., Lapidus A., Barry K., Detter J.C., Glavina del Rio T., Hammon N., Israni S., Dalin E., Tice H., Pitluck S., Sims D., Brettin T., Bruce D., Tapia R., Brainard J., Schmutz J., Larimer F. expand/collapse author list , Land M., Hauser L., Kyrpides N., Mikhailova N., Bennet G., Cann I., Chen J.-S., Contreras A.L., Jones D., Kashket E., Mitchell W., Stoddard S., Schwarz W., Qureshi N., Young M., Shi Z., Ezeji T., White B., Blaschek H., Richardson P.
Submitted (JUN-2007) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: ATCC 51743 / NCIMB 8052.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ		CP000721 Genomic DNA. Translation: ABR36236.1.
RefSeqYP_001311192.1. NC_009617.1.

3D structure databases

ProteinModelPortalA6M0V6.
SMRA6M0V6. Positions 4-550.
ModBaseSearch...

Protein-protein interaction databases

STRINGA6M0V6.

Protein family/group databases

CAZyGH43. Glycoside Hydrolase Family 43.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

GeneID5295282.
GenomeReviewsGene locus Cbei_4126 in contig CP000721_GR.
KEGGcbe:Cbei_4126.
PATRIC19352536. VBICloBei69853_4283.

Organism-specific databases

CMRSearch...

Phylogenomic databases

eggNOGCOG3507.
HOGENOMHBG347235.
OMAIGSWFEQ.
ProtClustDBCLSK883496.

Family and domain databases

InterProIPR008985. ConA-like_lec_gl.
IPR013320. ConA-like_subgrp.
IPR006710. Glyco_hydro_43.
IPR023296. Glyco_hydro_43_beta-prop.
[Graphical view]
Gene3DG3DSA:2.60.120.200. ConA_like_subgrp. 1 hit.
G3DSA:2.115.10.20. Glyco_hydro_43_beta-prop. 1 hit.
KOK01209.
PANTHERPTHR22925. Glyco_hydro_43. 1 hit.
PfamPF04616. Glyco_hydro_43. 1 hit.
[Graphical view]
SUPFAMSSF49899. ConA_like_lec_gl. 1 hit.
SSF75005. Glyco_hydro_43_beta-prop. 1 hit.
ProtoNetSearch...

Entry information

Entry nameA6M0V6_CLOB8
AccessionPrimary (citable) accession number: A6M0V6
Entry history
Integrated into UniProtKB/TrEMBL: July 24, 2007
Last sequence update: July 24, 2007
Last modified: December 14, 2011
This is version 26 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)
to top of pageNames·Attributes·Ontologies·Sequences·References·Cross-refs·Entry info