A6LSN2 (RL19_CLOB8) Reviewed, UniProtKB/Swiss-Prot

Names and origin

Protein names

Recommended name:
50S ribosomal protein L19

Gene names

Name:	rplS
Ordered Locus Names:	Cbei_1180

Organism

Clostridium beijerinckii (strain ATCC 51743 / NCIMB 8052) (Clostridium acetobutylicum) [Complete proteome] [HAMAP]

Taxonomic identifier

290402 [NCBI]

Taxonomic lineage

Bacteria › Firmicutes › Clostridia › Clostridiales › Clostridiaceae › Clostridium

Protein attributes

Sequence length	116 AA.
Sequence status	Complete.
Protein existence	Inferred from homology

General annotation (Comments)

Function	This protein is located at the 30S-50S ribosomal subunit interface and may play a role in the structure and function of the aminoacyl-tRNA binding site By similarity. HAMAP MF_00402
Sequence similarities	Belongs to the ribosomal protein L19P family.

Ontologies

Keywords
Molecular function	Ribonucleoprotein Ribosomal protein
Technical term	Complete proteome
Gene Ontology (GO)
Biological process	translation Inferred from electronic annotation. Source: InterPro
Cellular component	ribosome Inferred from electronic annotation. Source: UniProtKB-KW
Molecular function	structural constituent of ribosome Inferred from electronic annotation. Source: InterPro
Complete GO annotation...

Sequence annotation (Features)

	Feature key	Position(s)	Length	Description	Graphical view	Feature identifier
Molecule processing
	Chain	1 – 116	116	50S ribosomal protein L19 HAMAP MF_00402		PRO_1000080343

Sequences

	Sequence		Length	Mass (Da)
	A6LSN2 [UniParc]. Last modified July 24, 2007. Version 1. Checksum: 7C6DC2B0D72840CD	FASTA	116	13,368
	10 20 30 40 50 60 MNEIIRAIEA EQIRTDLPKF AIGDTIKVYV KIQEGNKERV QMFEGTVIKK QNGGLRETFT 70 80 90 100 110 VRRVAYGTGV ERTFPMNAPI IDKIEIARKG KVRRAKLYYL RDRVGKSAKV KELLTR

References

[1]

"Complete sequence of Clostridium beijerinckii NCIMB 8052." US DOE Joint Genome Institute Copeland A., Lucas S., Lapidus A., Barry K., Detter J.C., Glavina del Rio T., Hammon N., Israni S., Dalin E., Tice H., Pitluck S., Sims D., Brettin T., Bruce D., Tapia R., Brainard J., Schmutz J., Larimer F. , Land M., Hauser L., Kyrpides N., Mikhailova N., Bennet G., Cann I., Chen J.-S., Contreras A.L., Jones D., Kashket E., Mitchell W., Stoddard S., Schwarz W., Qureshi N., Young M., Shi Z., Ezeji T., White B., Blaschek H., Richardson P. Submitted (JUN-2007) to the EMBL/GenBank/DDBJ databases Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: ATCC 51743 / NCIMB 8052.

Cross-references

Sequence databases
EMBL GenBank DDBJ	CP000721 Genomic DNA. Translation: ABR33362.1.
RefSeq	YP_001308318.1. NC_009617.1.
3D structure databases
ProteinModelPortal	A6LSN2.
SMR	A6LSN2. Positions 3-114.
ModBase	Search...
Protein-protein interaction databases
STRING	A6LSN2.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
GeneID	5292406.
GenomeReviews	Gene locus Cbei_1180 in contig CP000721_GR.
KEGG	cbe:Cbei_1180.
PATRIC	19346328. VBICloBei69853_1210.
Organism-specific databases
CMR	Search...
Phylogenomic databases
eggNOG	COG0335.
HOGENOM	HBG611003.
OMA	FPLHSPI.
ProtClustDB	PRK05338.
Enzyme and pathway databases
BioCyc	CBEI290402:CBEI_1180-MONOMER.
Family and domain databases
HAMAP	MF_00402. Ribosomal_L19. [Tree]
InterPro	IPR001857. Ribosomal_L19. IPR018257. Ribosomal_L19_CS. IPR008991. Translation_prot_SH3-like. [Graphical view]
KO	K02884.
PANTHER	PTHR15680. Ribosomal_L19. 1 hit.
Pfam	PF01245. Ribosomal_L19. 1 hit. [Graphical view]
PIRSF	PIRSF002191. Ribosomal_L19. 1 hit.
PRINTS	PR00061. RIBOSOMALL19.
SUPFAM	SSF50104. Transl_SH3_like. 1 hit.
TIGRFAMs	TIGR01024. RplS_bact. 1 hit.
PROSITE	PS01015. RIBOSOMAL_L19. 1 hit. [Graphical view]
ProtoNet	Search...

Entry information

Entry name

RL19_CLOB8

Accession

Primary (citable) accession number: A6LSN2

Entry history

Integrated into UniProtKB/Swiss-Prot:	May 20, 2008
Last sequence update:	July 24, 2007
Last modified:	January 25, 2012
This is version 32 of the entry and version 1 of the sequence. [Complete history]

Entry status

Reviewed (UniProtKB/Swiss-Prot)

Annotation program

Prokaryotic Protein Annotation Program