A6LS03 (A6LS03_CLOB8) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
Glycoside hydrolase, family 46 EMBL ABR33133.1

Gene names

Ordered Locus Names:

Cbei_0949

Organism

Clostridium beijerinckii (strain ATCC 51743 / NCIMB 8052) (Clostridium acetobutylicum) [Complete proteome] [HAMAP] EMBL ABR33133.1

Taxonomic identifier

290402 [NCBI]

Taxonomic lineage

Bacteria › Firmicutes › Clostridia › Clostridiales › Clostridiaceae › Clostridium

Protein attributes

Sequence length	266 AA.
Sequence status	Complete.
Sequence processing	The displayed sequence is further processed into a mature form.
Protein existence	Predicted

Ontologies

Keywords
Domain	Signal EMBL ABR33133.1
Molecular function	Hydrolase EMBL ABR33133.1
Technical term	Complete proteome
Gene Ontology (GO)
Biological process	carbohydrate metabolic process Inferred from electronic annotation. Source: InterPro
Cellular component	extracellular region Inferred from electronic annotation. Source: InterPro
Molecular function	chitosanase activity Inferred from electronic annotation. Source: InterPro
Complete GO annotation...

Sequence annotation (Features)

	Feature key	Position(s)	Length	Description	Graphical view	Feature identifier
Molecule processing
	Signal peptide	1 – 27	27	Potential EMBL ABR33133.1
	Chain	28 – 266	239	Potential EMBL ABR33133.1		PRO_5000253320

Sequences

	Sequence		Length	Mass (Da)
	A6LS03 [UniParc]. Last modified July 24, 2007. Version 1. Checksum: 367977D92FAA7A6A	FASTA	266	29,773
	10 20 30 40 50 60 MKNLRKLVTL AVSLTMCLSF SSAALAITAN SEQKAVDLQL TTVCENSKTK FVYNYAEKLG 70 80 90 100 110 120 SFDGRGITFG CIGFTTGTYD GNILIHYYTK LNPNNNLAKY IPALDRIDKE EHDEDGKNDD 130 140 150 160 170 180 IKGLDNFIKD VKACNDSLFK KAQLYELDEM YWKPAVSLAT SIGAKHQLTL AFIYDMCVNH 190 200 210 220 230 240 GEDGAKEYIN SAKKKLGGLP KDGIDENKFL SSVMDYRYAF LKDDDPEGSD RVNAYRKLLK 250 260 AGNVDLKPDF NFTVYGDTFN IDGDVY

References

[1]

"Complete sequence of Clostridium beijerinckii NCIMB 8052." Copeland A., Lucas S., Lapidus A., Barry K., Detter J.C., Glavina del Rio T., Hammon N., Israni S., Dalin E., Tice H., Pitluck S., Sims D., Brettin T., Bruce D., Tapia R., Brainard J., Schmutz J., Larimer F. , Land M., Hauser L., Kyrpides N., Mikhailova N., Bennet G., Cann I., Chen J.-S., Contreras A.L., Jones D., Kashket E., Mitchell W., Stoddard S., Schwarz W., Qureshi N., Young M., Shi Z., Ezeji T., White B., Blaschek H., Richardson P. Submitted (JUN-2007) to the EMBL/GenBank/DDBJ databases Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: ATCC 51743 / NCIMB 8052.

Cross-references

Sequence databases
EMBL GenBank DDBJ	CP000721 Genomic DNA. Translation: ABR33133.1.
RefSeq	YP_001308089.1. NC_009617.1.
3D structure databases
ProteinModelPortal	A6LS03.
ModBase	Search...
Protein family/group databases
CAZy	GH46. Glycoside Hydrolase Family 46.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
GeneID	5292177.
GenomeReviews	Gene locus Cbei_0949 in contig CP000721_GR.
KEGG	cbe:Cbei_0949.
PATRIC	19345856. VBICloBei69853_0974.
Organism-specific databases
CMR	Search...
Phylogenomic databases
eggNOG	NOG47907.
OMA	NSSLDWK.
ProtClustDB	CLSK887643.
Family and domain databases
InterPro	IPR000400. Glyco_hydro_46. IPR023099. Glyco_hydro_46_N. IPR023346. Lysozyme-like_dom. [Graphical view]
Gene3D	G3DSA:3.30.386.10. Glyco_hydro_46_N. 1 hit.
Pfam	PF01374. Glyco_hydro_46. 1 hit. [Graphical view]
SUPFAM	SSF53955. SSF53955. 1 hit.
PROSITE	PS60000. CHITOSANASE_46_80. 1 hit. [Graphical view]
ProtoNet	Search...

Entry information

Entry name

A6LS03_CLOB8

Accession

Primary (citable) accession number: A6LS03

Entry history

Integrated into UniProtKB/TrEMBL:	July 24, 2007
Last sequence update:	July 24, 2007
Last modified:	December 14, 2011
This is version 24 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)