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Protein
Submitted name:

DNA topoisomerase

Gene

Cbei_0868

Organism
Clostridium beijerinckii (strain ATCC 51743 / NCIMB 8052) (Clostridium acetobutylicum)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Protein predictedi

Functioni

GO - Molecular functioni

GO - Biological processi

Complete GO annotation...

Keywords - Molecular functioni

IsomeraseImported

Names & Taxonomyi

Protein namesi
Submitted name:
DNA topoisomeraseImported (EC:5.99.1.2Imported)
Gene namesi
Ordered Locus Names:Cbei_0868Imported
OrganismiClostridium beijerinckii (strain ATCC 51743 / NCIMB 8052) (Clostridium acetobutylicum)Imported
Taxonomic identifieri290402 [NCBI]
Taxonomic lineageiBacteriaFirmicutesClostridiaClostridialesClostridiaceaeClostridium
Proteomesi
  • UP000000565 Componenti: Chromosome

Interactioni

Protein-protein interaction databases

STRINGi290402.Cbei_0868.

Structurei

3D structure databases

ProteinModelPortaliA6LRS2.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini2 – 142ToprimInterPro annotationAdd BLAST141

Phylogenomic databases

eggNOGiENOG4108IYH. Bacteria.
COG0550. LUCA.
HOGENOMiHOG000086847.
KOiK03169.
OMAiRVMETCG.
OrthoDBiPOG091H028X.

Family and domain databases

Gene3Di1.10.290.10. 1 hit.
1.10.460.10. 2 hits.
3.40.50.140. 1 hit.
InterProiIPR000380. Topo_IA.
IPR003601. Topo_IA_2.
IPR013497. Topo_IA_cen.
IPR013824. Topo_IA_cen_sub1.
IPR013826. Topo_IA_cen_sub3.
IPR023405. Topo_IA_core_domain.
IPR003602. Topo_IA_DNA-bd_dom.
IPR006171. Toprim_domain.
[Graphical view]
PANTHERiPTHR11390. PTHR11390. 2 hits.
PfamiPF01131. Topoisom_bac. 1 hit.
PF01751. Toprim. 1 hit.
[Graphical view]
PRINTSiPR00417. PRTPISMRASEI.
SMARTiSM00437. TOP1Ac. 1 hit.
SM00436. TOP1Bc. 1 hit.
SM00493. TOPRIM. 1 hit.
[Graphical view]
SUPFAMiSSF56712. SSF56712. 1 hit.
PROSITEiPS50880. TOPRIM. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

A6LRS2-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MAKVIIAEKP SVAKNIADAF NVKTRRDGYF EGNGYYITWA FGHLLQLYDA
60 70 80 90 100
KDYDENMKGW RFEKFPFIPE HFLYKVKCDS VDRTVEDKGA KKQLGIIKSL
110 120 130 140 150
IDKEDVDGIV SATDFDREGQ VIADELFGYF KVKKPIYRLL LNEWTPDEVK
160 170 180 190 200
SGMESLKDNK EMQPLQDAGI GRQWSDWIIG INLTSVSTLK YKFEENKTIN
210 220 230 240 250
IGRVLLPTLK IIYDRDKEIE NFTATTYYKL VSNFKTSANE EFEGLYYEND
260 270 280 290 300
SEKFEKKEDL DKFISRLEGA TAKIIDKQTE LKKEYPPYLF NLSNLQGHIT
310 320 330 340 350
SKYKGWTSDK VLKVAQSLYE KKLTTYPRTA SVVLEESLKD RAKKVLNTLK
360 370 380 390 400
AGLPYEKDIK FSTSKRIFDS SKVESHSAIT PTYIKPSGLS SDEKIVYDAI
410 420 430 440 450
KNRFIMQFMP IAEFEETKVT LKANVSEMNG IFVSKGKVKL VEGWKVVEKI
460 470 480 490 500
ESKDVILPKI EIDETVDIVD SKVNSVTKKP PKYHTEKTLL RVMETCGKGI
510 520 530 540 550
EGKDEDSEEM MQAILSGFSI GTPATRAETI KKLKDIGYLK TKGKNLMCTE
560 570 580 590 600
LGRNLVETFP VKELFDLEYT GRLEKTLSDI EKGKFAKSEF IKLITDFTIQ
610 620 630 640 650
SVELIKKDDA ALSRFKVEIP KDSENIGPCP VCGNPVIEGE KSFGCSNWKN
660 670 680 690 700
GCKYTIWKDD RYIASFGKKI SKEMVELLLK NGKVGFRNLK SKKGNTFSAY
710 720
FKYEKNEESG YFNWKIEFID NK
Length:722
Mass (Da):82,746
Last modified:July 24, 2007 - v1
Checksum:i1319E62466BFD3AF
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP000721 Genomic DNA. Translation: ABR33052.1.
RefSeqiWP_011968211.1. NC_009617.1.

Genome annotation databases

EnsemblBacteriaiABR33052; ABR33052; Cbei_0868.
KEGGicbe:Cbei_0868.
PATRICi19345690. VBICloBei69853_0891.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP000721 Genomic DNA. Translation: ABR33052.1.
RefSeqiWP_011968211.1. NC_009617.1.

3D structure databases

ProteinModelPortaliA6LRS2.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi290402.Cbei_0868.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiABR33052; ABR33052; Cbei_0868.
KEGGicbe:Cbei_0868.
PATRICi19345690. VBICloBei69853_0891.

Phylogenomic databases

eggNOGiENOG4108IYH. Bacteria.
COG0550. LUCA.
HOGENOMiHOG000086847.
KOiK03169.
OMAiRVMETCG.
OrthoDBiPOG091H028X.

Family and domain databases

Gene3Di1.10.290.10. 1 hit.
1.10.460.10. 2 hits.
3.40.50.140. 1 hit.
InterProiIPR000380. Topo_IA.
IPR003601. Topo_IA_2.
IPR013497. Topo_IA_cen.
IPR013824. Topo_IA_cen_sub1.
IPR013826. Topo_IA_cen_sub3.
IPR023405. Topo_IA_core_domain.
IPR003602. Topo_IA_DNA-bd_dom.
IPR006171. Toprim_domain.
[Graphical view]
PANTHERiPTHR11390. PTHR11390. 2 hits.
PfamiPF01131. Topoisom_bac. 1 hit.
PF01751. Toprim. 1 hit.
[Graphical view]
PRINTSiPR00417. PRTPISMRASEI.
SMARTiSM00437. TOP1Ac. 1 hit.
SM00436. TOP1Bc. 1 hit.
SM00493. TOPRIM. 1 hit.
[Graphical view]
SUPFAMiSSF56712. SSF56712. 1 hit.
PROSITEiPS50880. TOPRIM. 1 hit.
[Graphical view]
ProtoNetiSearch...

Entry informationi

Entry nameiA6LRS2_CLOB8
AccessioniPrimary (citable) accession number: A6LRS2
Entry historyi
Integrated into UniProtKB/TrEMBL: July 24, 2007
Last sequence update: July 24, 2007
Last modified: November 2, 2016
This is version 69 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.