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A6LR71

- A6LR71_CLOB8

UniProt

A6LR71 - A6LR71_CLOB8

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Protein

Alpha-amylase

Gene

Cbei_0664

Organism
Clostridium beijerinckii (strain ATCC 51743 / NCIMB 8052) (Clostridium acetobutylicum)
Status
Unreviewed - Annotation score: 2 out of 5- Protein inferred from homologyi

Functioni

Catalytic activityi

Endohydrolysis of (1->4)-alpha-D-glucosidic linkages in polysaccharides containing three or more (1->4)-alpha-linked D-glucose units.UniRule annotation

GO - Molecular functioni

  1. alpha-amylase activity Source: UniProtKB-EC
  2. cation binding Source: InterPro
  3. starch binding Source: InterPro

GO - Biological processi

  1. carbohydrate metabolic process Source: UniProtKB-KW
Complete GO annotation...

Keywords - Molecular functioni

GlycosidaseUniRule annotation, Hydrolase

Keywords - Biological processi

Carbohydrate metabolismUniRule annotation

Enzyme and pathway databases

BioCyciCBEI290402:GHL5-729-MONOMER.

Protein family/group databases

CAZyiCBM25. Carbohydrate-Binding Module Family 25.
GH13. Glycoside Hydrolase Family 13.

Names & Taxonomyi

Protein namesi
Recommended name:
Alpha-amylaseUniRule annotation (EC:3.2.1.1UniRule annotation)
Gene namesi
Ordered Locus Names:Cbei_0664Imported
OrganismiClostridium beijerinckii (strain ATCC 51743 / NCIMB 8052) (Clostridium acetobutylicum)Imported
Taxonomic identifieri290402 [NCBI]
Taxonomic lineageiBacteriaFirmicutesClostridiaClostridialesClostridiaceaeClostridium
ProteomesiUP000000565: Chromosome

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Signal peptidei1 – 4040 PotentialImportedAdd
BLAST
Chaini41 – 666626 PotentialImportedPRO_5000253292Add
BLAST

Interactioni

Protein-protein interaction databases

STRINGi290402.Cbei_0664.

Structurei

3D structure databases

ProteinModelPortaliA6LR71.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Sequence similaritiesi

Belongs to the glycosyl hydrolase 13 family.UniRule annotation

Keywords - Domaini

SignalImported

Phylogenomic databases

eggNOGiCOG0366.
HOGENOMiHOG000292529.
KOiK01176.
OMAiNYANDSE.
OrthoDBiEOG6F55CH.

Family and domain databases

Gene3Di2.60.40.1180. 1 hit.
3.20.20.80. 1 hit.
InterProiIPR006048. A-amylase_b_C.
IPR006046. Alpha_amylase.
IPR005085. CBM_fam25.
IPR015902. Glyco_hydro_13.
IPR013780. Glyco_hydro_13_b.
IPR006047. Glyco_hydro_13_cat_dom.
IPR013781. Glyco_hydro_catalytic_dom.
IPR017853. Glycoside_hydrolase_SF.
[Graphical view]
PANTHERiPTHR10357. PTHR10357. 1 hit.
PfamiPF00128. Alpha-amylase. 1 hit.
PF03423. CBM_25. 2 hits.
[Graphical view]
PRINTSiPR00110. ALPHAAMYLASE.
SMARTiSM00632. Aamy_C. 1 hit.
SM01066. CBM_25. 2 hits.
[Graphical view]
SUPFAMiSSF51445. SSF51445. 1 hit.

Sequencei

Sequence statusi: Complete.

Sequence processingi: The displayed sequence is further processed into a mature form.

A6LR71-1 [UniParc]FASTAAdd to Basket

« Hide

        10         20         30         40         50
MRKKIISRLI ASGLFLSLNL LPISIPSFGT NGILTTAYAA SSTSLPSNAK
60 70 80 90 100
DGAILHAFDW SFATIKNELP NIAAAGYKSV QVSPVQGTKS SSKDPSQWWL
110 120 130 140 150
LYQPTNQSVG NAQLGNYDDF KALCTEADKY GISIVVDVVM NHMANNGNPD
160 170 180 190 200
QLDSSIDPSF KDPNLYHNQG QCSNWTNRYD VTQKGIGMPD LNTQNSTVQN
210 220 230 240 250
KAITFLNQCI DAGADGFRFD AAKHIETNIG LDSNQSWSGN YWSNVLGNLH
260 270 280 290 300
NKSNLFIYGE ILQDGSVDNI ASYESFMNVT ASNYGGAVRS AVTSTNLSSL
310 320 330 340 350
GTTLGGVDSS KAVDFVETHD TYEDGSSKNL TDTQRKLGWA IAAARANATP
360 370 380 390 400
LFFDRPTGNI GSKGDDLWKD ADIVAINNFH NAMVGKNEYI RWTNNNTTML
410 420 430 440 450
IDRGTDGTVI VNDGGSTSIN SPTNLANGTY TNKGSANCTL TVSNGTISGN
460 470 480 490 500
IPANSVIVLY NDGSILTPPV PSTYAPHSGY KVDYDSSTLL QGNSFTLYYS
510 520 530 540 550
GSLANSSSVK LHWGYNGFLN PSDVTMTKGS DGFWAATIKI PSSATKLDFD
560 570 580 590 600
FTNGSNWDNN SSKDWHLQVS SSSVPVQVNP APTASKTTTI YYNGNLAANS
610 620 630 640 650
TSVILHWGYN DFTNPTDVTM TKQSDGRWAA TITIPSATYS LNMAFKNDSG
660
SWDSNSSANY NYSISQ
Length:666
Mass (Da):71,739
Last modified:July 24, 2007 - v1
Checksum:iE88860185E46983D
GO

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
CP000721 Genomic DNA. Translation: ABR32851.1.
RefSeqiYP_001307807.1. NC_009617.1.

Genome annotation databases

EnsemblBacteriaiABR32851; ABR32851; Cbei_0664.
GeneIDi5291895.
KEGGicbe:Cbei_0664.
PATRICi19345264. VBICloBei69853_0683.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
CP000721 Genomic DNA. Translation: ABR32851.1 .
RefSeqi YP_001307807.1. NC_009617.1.

3D structure databases

ProteinModelPortali A6LR71.
ModBasei Search...
MobiDBi Search...

Protein-protein interaction databases

STRINGi 290402.Cbei_0664.

Protein family/group databases

CAZyi CBM25. Carbohydrate-Binding Module Family 25.
GH13. Glycoside Hydrolase Family 13.

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

EnsemblBacteriai ABR32851 ; ABR32851 ; Cbei_0664 .
GeneIDi 5291895.
KEGGi cbe:Cbei_0664.
PATRICi 19345264. VBICloBei69853_0683.

Phylogenomic databases

eggNOGi COG0366.
HOGENOMi HOG000292529.
KOi K01176.
OMAi NYANDSE.
OrthoDBi EOG6F55CH.

Enzyme and pathway databases

BioCyci CBEI290402:GHL5-729-MONOMER.

Family and domain databases

Gene3Di 2.60.40.1180. 1 hit.
3.20.20.80. 1 hit.
InterProi IPR006048. A-amylase_b_C.
IPR006046. Alpha_amylase.
IPR005085. CBM_fam25.
IPR015902. Glyco_hydro_13.
IPR013780. Glyco_hydro_13_b.
IPR006047. Glyco_hydro_13_cat_dom.
IPR013781. Glyco_hydro_catalytic_dom.
IPR017853. Glycoside_hydrolase_SF.
[Graphical view ]
PANTHERi PTHR10357. PTHR10357. 1 hit.
Pfami PF00128. Alpha-amylase. 1 hit.
PF03423. CBM_25. 2 hits.
[Graphical view ]
PRINTSi PR00110. ALPHAAMYLASE.
SMARTi SM00632. Aamy_C. 1 hit.
SM01066. CBM_25. 2 hits.
[Graphical view ]
SUPFAMi SSF51445. SSF51445. 1 hit.
ProtoNeti Search...

Publicationsi

  1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: ATCC 51743 / NCIMB 8052Imported.

Entry informationi

Entry nameiA6LR71_CLOB8
AccessioniPrimary (citable) accession number: A6LR71
Entry historyi
Integrated into UniProtKB/TrEMBL: July 24, 2007
Last sequence update: July 24, 2007
Last modified: October 29, 2014
This is version 49 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported

External Data

Dasty 3