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A6LR71

- A6LR71_CLOB8

UniProt

A6LR71 - A6LR71_CLOB8

Protein

Alpha-amylase

Gene

Cbei_0664

Organism
Clostridium beijerinckii (strain ATCC 51743 / NCIMB 8052) (Clostridium acetobutylicum)
Status
Unreviewed - Annotation score: 2 out of 5- Protein inferred from homologyi
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    • History
      Entry version 48 (01 Oct 2014)
      Sequence version 1 (24 Jul 2007)
      Previous versions | rss
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    Functioni

    Catalytic activityi

    Endohydrolysis of (1->4)-alpha-D-glucosidic linkages in polysaccharides containing three or more (1->4)-alpha-linked D-glucose units.UniRule annotation

    GO - Molecular functioni

    1. alpha-amylase activity Source: UniProtKB-EC
    2. cation binding Source: InterPro
    3. starch binding Source: InterPro

    GO - Biological processi

    1. carbohydrate metabolic process Source: UniProtKB-KW

    Keywords - Molecular functioni

    GlycosidaseUniRule annotation, Hydrolase

    Keywords - Biological processi

    Carbohydrate metabolismUniRule annotation

    Enzyme and pathway databases

    BioCyciCBEI290402:GHL5-729-MONOMER.

    Protein family/group databases

    CAZyiCBM25. Carbohydrate-Binding Module Family 25.
    GH13. Glycoside Hydrolase Family 13.

    Names & Taxonomyi

    Protein namesi
    Recommended name:
    Alpha-amylaseUniRule annotation (EC:3.2.1.1UniRule annotation)
    Gene namesi
    Ordered Locus Names:Cbei_0664Imported
    OrganismiClostridium beijerinckii (strain ATCC 51743 / NCIMB 8052) (Clostridium acetobutylicum)Imported
    Taxonomic identifieri290402 [NCBI]
    Taxonomic lineageiBacteriaFirmicutesClostridiaClostridialesClostridiaceaeClostridium
    ProteomesiUP000000565: Chromosome

    PTM / Processingi

    Molecule processing

    Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
    Signal peptidei1 – 4040 PotentialImportedAdd
    BLAST
    Chaini41 – 666626 PotentialImportedPRO_5000253292Add
    BLAST

    Interactioni

    Protein-protein interaction databases

    STRINGi290402.Cbei_0664.

    Structurei

    3D structure databases

    ProteinModelPortaliA6LR71.
    ModBaseiSearch...
    MobiDBiSearch...

    Family & Domainsi

    Sequence similaritiesi

    Belongs to the glycosyl hydrolase 13 family.UniRule annotation

    Keywords - Domaini

    SignalImported

    Phylogenomic databases

    eggNOGiCOG0366.
    HOGENOMiHOG000292529.
    KOiK01176.
    OMAiNYANDSE.
    OrthoDBiEOG6F55CH.

    Family and domain databases

    Gene3Di2.60.40.1180. 1 hit.
    3.20.20.80. 1 hit.
    InterProiIPR006048. A-amylase_b_C.
    IPR006046. Alpha_amylase.
    IPR005085. CBM_fam25.
    IPR015902. Glyco_hydro_13.
    IPR013780. Glyco_hydro_13_b.
    IPR006047. Glyco_hydro_13_cat_dom.
    IPR013781. Glyco_hydro_catalytic_dom.
    IPR017853. Glycoside_hydrolase_SF.
    [Graphical view]
    PANTHERiPTHR10357. PTHR10357. 1 hit.
    PfamiPF00128. Alpha-amylase. 1 hit.
    PF03423. CBM_25. 2 hits.
    [Graphical view]
    PRINTSiPR00110. ALPHAAMYLASE.
    SMARTiSM00632. Aamy_C. 1 hit.
    SM01066. CBM_25. 2 hits.
    [Graphical view]
    SUPFAMiSSF51445. SSF51445. 1 hit.

    Sequencei

    Sequence statusi: Complete.

    Sequence processingi: The displayed sequence is further processed into a mature form.

    A6LR71-1 [UniParc]FASTAAdd to Basket

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    MRKKIISRLI ASGLFLSLNL LPISIPSFGT NGILTTAYAA SSTSLPSNAK    50
    DGAILHAFDW SFATIKNELP NIAAAGYKSV QVSPVQGTKS SSKDPSQWWL 100
    LYQPTNQSVG NAQLGNYDDF KALCTEADKY GISIVVDVVM NHMANNGNPD 150
    QLDSSIDPSF KDPNLYHNQG QCSNWTNRYD VTQKGIGMPD LNTQNSTVQN 200
    KAITFLNQCI DAGADGFRFD AAKHIETNIG LDSNQSWSGN YWSNVLGNLH 250
    NKSNLFIYGE ILQDGSVDNI ASYESFMNVT ASNYGGAVRS AVTSTNLSSL 300
    GTTLGGVDSS KAVDFVETHD TYEDGSSKNL TDTQRKLGWA IAAARANATP 350
    LFFDRPTGNI GSKGDDLWKD ADIVAINNFH NAMVGKNEYI RWTNNNTTML 400
    IDRGTDGTVI VNDGGSTSIN SPTNLANGTY TNKGSANCTL TVSNGTISGN 450
    IPANSVIVLY NDGSILTPPV PSTYAPHSGY KVDYDSSTLL QGNSFTLYYS 500
    GSLANSSSVK LHWGYNGFLN PSDVTMTKGS DGFWAATIKI PSSATKLDFD 550
    FTNGSNWDNN SSKDWHLQVS SSSVPVQVNP APTASKTTTI YYNGNLAANS 600
    TSVILHWGYN DFTNPTDVTM TKQSDGRWAA TITIPSATYS LNMAFKNDSG 650
    SWDSNSSANY NYSISQ 666
    Length:666
    Mass (Da):71,739
    Last modified:July 24, 2007 - v1
    Checksum:iE88860185E46983D
    GO

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    CP000721 Genomic DNA. Translation: ABR32851.1.
    RefSeqiYP_001307807.1. NC_009617.1.

    Genome annotation databases

    EnsemblBacteriaiABR32851; ABR32851; Cbei_0664.
    GeneIDi5291895.
    KEGGicbe:Cbei_0664.
    PATRICi19345264. VBICloBei69853_0683.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    CP000721 Genomic DNA. Translation: ABR32851.1 .
    RefSeqi YP_001307807.1. NC_009617.1.

    3D structure databases

    ProteinModelPortali A6LR71.
    ModBasei Search...
    MobiDBi Search...

    Protein-protein interaction databases

    STRINGi 290402.Cbei_0664.

    Protein family/group databases

    CAZyi CBM25. Carbohydrate-Binding Module Family 25.
    GH13. Glycoside Hydrolase Family 13.

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Genome annotation databases

    EnsemblBacteriai ABR32851 ; ABR32851 ; Cbei_0664 .
    GeneIDi 5291895.
    KEGGi cbe:Cbei_0664.
    PATRICi 19345264. VBICloBei69853_0683.

    Phylogenomic databases

    eggNOGi COG0366.
    HOGENOMi HOG000292529.
    KOi K01176.
    OMAi NYANDSE.
    OrthoDBi EOG6F55CH.

    Enzyme and pathway databases

    BioCyci CBEI290402:GHL5-729-MONOMER.

    Family and domain databases

    Gene3Di 2.60.40.1180. 1 hit.
    3.20.20.80. 1 hit.
    InterProi IPR006048. A-amylase_b_C.
    IPR006046. Alpha_amylase.
    IPR005085. CBM_fam25.
    IPR015902. Glyco_hydro_13.
    IPR013780. Glyco_hydro_13_b.
    IPR006047. Glyco_hydro_13_cat_dom.
    IPR013781. Glyco_hydro_catalytic_dom.
    IPR017853. Glycoside_hydrolase_SF.
    [Graphical view ]
    PANTHERi PTHR10357. PTHR10357. 1 hit.
    Pfami PF00128. Alpha-amylase. 1 hit.
    PF03423. CBM_25. 2 hits.
    [Graphical view ]
    PRINTSi PR00110. ALPHAAMYLASE.
    SMARTi SM00632. Aamy_C. 1 hit.
    SM01066. CBM_25. 2 hits.
    [Graphical view ]
    SUPFAMi SSF51445. SSF51445. 1 hit.
    ProtoNeti Search...

    Publicationsi

    1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
      Strain: ATCC 51743 / NCIMB 8052Imported.

    Entry informationi

    Entry nameiA6LR71_CLOB8
    AccessioniPrimary (citable) accession number: A6LR71
    Entry historyi
    Integrated into UniProtKB/TrEMBL: July 24, 2007
    Last sequence update: July 24, 2007
    Last modified: October 1, 2014
    This is version 48 of the entry and version 1 of the sequence. [Complete history]
    Entry statusiUnreviewed (UniProtKB/TrEMBL)

    Miscellaneousi

    Keywords - Technical termi

    Complete proteome, Reference proteomeImported

    External Data

    Dasty 3