A6LLS6 (A6LLS6_THEM4) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
Glycoside hydrolase, family 85 EMBL ABR30877.1

Gene names

Ordered Locus Names:

Tmel_1016

Organism

Thermosipho melanesiensis (strain BI429 / DSM 12029) [Complete proteome] [HAMAP]

Taxonomic identifier

391009 [NCBI]

Taxonomic lineage

Bacteria › Thermotogae › Thermotogales › Thermotogaceae › Thermosipho

Protein attributes

Sequence length	880 AA.
Sequence status	Complete.
Sequence processing	The displayed sequence is further processed into a mature form.
Protein existence	Predicted

Ontologies

Keywords
Domain	Signal EMBL ABR30877.1
Molecular function	Hydrolase EMBL ABR30877.1
Technical term	Complete proteome
Gene Ontology (GO)
Biological process	cell adhesion Inferred from electronic annotation. Source: InterPro
Cellular component	cytoplasm Inferred from electronic annotation. Source: InterPro
Molecular function	mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase activity Inferred from electronic annotation. Source: InterPro
Complete GO annotation...

Sequence annotation (Features)

	Feature key	Position(s)	Length	Description	Graphical view	Feature identifier
Molecule processing
	Signal peptide	1 – 19	19	Potential EMBL ABR30877.1
	Chain	20 – 880	861	Potential EMBL ABR30877.1		PRO_5000253140

Sequences

	Sequence		Length	Mass (Da)
	A6LLS6 [UniParc]. Last modified July 24, 2007. Version 1. Checksum: 92CE948C42BFAE36	FASTA	880	101,394
	10 20 30 40 50 60 MKKLVFILLI IFSIFVYAIP ESSYWYPNDL LDWKSDPNIV YNISHIPLAK RIYAEPITNF 70 80 90 100 110 120 AEKDVKIMVL SIMNPSTSGM PSQGSNNSFK TYPFSFWQYV DYLVAWAGSA GEGIIVPPSA 130 140 150 160 170 180 DVIDLAHKNG VYVLGTIFFP PNIYGGRRNW VDQLLKEENG KFIIADKLIE VAETYGFDGW 190 200 210 220 230 240 FINQETKGCN ETHVKKMINF LNYLKEKAPW MKVVWYDAMS KIGAIEWQGE LNENNVVYIV 250 260 270 280 290 300 NNDKKLVDAI FLDFRWQSLK RPETIENTLN TMKKYNLKKD DIFVGFDLQA NGFYTYSNWP 310 320 330 340 350 360 KIIDENGKLK VSLGFYCPSW AYYSTKNISK FWQNEETLWI ADHPVLTYNG KEEFFKIKWN 370 380 390 400 410 420 ENYKQYRWQA PSKFVVEKSP ITSLPFITHF NAGHGYAFYV DGKKLSNIPW NNRSLMDIFP 430 440 450 460 470 480 TYRWKVTGPI PKIFVDYSTA YYGGSSLKIQ GNLEKGERTL ITLYAAELYI ENPTILETVI 490 500 510 520 530 540 KGTGNIKTRV ILTFENNKNK SYELKLFDDW VKTIYNLETE KNIKYISFEI EGSTKTSYNI 550 560 570 580 590 600 NIGKIGIIPV KNEKVRKVTN VKIDELTFKE GLYAQMKLHW NKSNAEYYEI YRIKNGKREF 610 620 630 640 650 660 VWATYNNYTY ISEITRYGKE TSTTLEIVGV SKDMQRSIPT KISFNWPPYP KPKANFEVSN 670 680 690 700 710 720 TIILPNSSVT FFDKSSKVTE KWLWILPGAT PNVSYEKNPV VTYKKEGIYP AILVAMNSEG 730 740 750 760 770 780 EDVKIYNPLI VVTTKAKNIK NLALNKKTYA SSNVPTEKPS MAVDGTVENN SKWCAVGELP 790 800 810 820 830 840 HWLVIDFGKE VIISSVIIKH AEAGHESPDW NTKDFRLQAS DDGKSWKDIS VVKGNTKGIT 850 860 870 880 KHSFAPVKTR YFRLFVETPT QTGDKAARIY EVEVYGLESF

References

[1]

"Complete sequence of Thermosipho melanesiensis BI429." Copeland A., Lucas S., Lapidus A., Barry K., Glavina del Rio T., Dalin E., Tice H., Pitluck S., Chertkov O., Brettin T., Bruce D., Detter J.C., Han C., Schmutz J., Larimer F., Land M., Hauser L., Kyrpides N. , Mikhailova N., Nelson K., Gogarten J.P., Noll K., Richardson P. Submitted (MAY-2007) to the EMBL/GenBank/DDBJ databases Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: BI429 / DSM 12029.

Cross-references

Sequence databases
EMBL GenBank DDBJ	CP000716 Genomic DNA. Translation: ABR30877.1.
RefSeq	YP_001306262.1. NC_009616.1.
3D structure databases
ProteinModelPortal	A6LLS6.
ModBase	Search...
Protein-protein interaction databases
STRING	A6LLS6.
Protein family/group databases
CAZy	CBM32. Carbohydrate-Binding Module Family 32. GH85. Glycoside Hydrolase Family 85.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
GeneID	5296580.
GenomeReviews	Gene locus Tmel_1016 in contig CP000716_GR.
KEGG	tme:Tmel_1016.
NMPDR	fig|391009.4.peg.1055.
PATRIC	23923275. VBITheMel19269_1058.
Organism-specific databases
CMR	Search...
Phylogenomic databases
eggNOG	COG4724.
HOGENOM	HBG348351.
OMA	YDSMTKD.
ProtClustDB	CLSK2792001.
Family and domain databases
InterPro	IPR000421. Coagulation_fac_5/8-C_type_dom. IPR008979. Galactose-bd-like. IPR005201. Glyco_hydro_85. IPR022409. PKD/Chitinase_dom. IPR000601. PKD_dom. [Graphical view]
Gene3D	G3DSA:2.60.40.670. PKD. 1 hit.
Pfam	PF00754. F5_F8_type_C. 1 hit. PF03644. Glyco_hydro_85. 1 hit. PF00801. PKD. 1 hit. [Graphical view]
SMART	SM00231. FA58C. 1 hit. SM00089. PKD. 1 hit. [Graphical view]
SUPFAM	SSF49785. Gal_bind_like. 1 hit. SSF49299. PKD. 1 hit.
PROSITE	PS50022. FA58C_3. 1 hit. [Graphical view]
ProtoNet	Search...

Entry information

Entry name

A6LLS6_THEM4

Accession

Primary (citable) accession number: A6LLS6

Entry history

Integrated into UniProtKB/TrEMBL:	July 24, 2007
Last sequence update:	July 24, 2007
Last modified:	December 14, 2011
This is version 30 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)