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A6LLS1 (A6LLS1_THEM4) Unreviewed, UniProtKB/TrEMBL

Last modified December 14, 2011. Version 25. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein namesSubmitted name:
Glycoside hydrolase, family 38 EMBL ABR30872.1
Gene names
Ordered Locus Names:Tmel_1011
OrganismThermosipho melanesiensis (strain BI429 / DSM 12029) [Complete proteome] [HAMAP]
Taxonomic identifier391009 [NCBI]
Taxonomic lineageBacteria › Thermotogae › Thermotogales › Thermotogaceae › Thermosipho

Protein attributes

Sequence length988 AA.
Sequence statusComplete.
Protein existencePredicted

Ontologies

Keywords
   Molecular functionHydrolase EMBL ABR30872.1
   Technical termComplete proteome
Gene Ontology (GO)
   Biological processmannose metabolic process

Inferred from electronic annotation. Source: InterPro

   Molecular functionalpha-mannosidase activity

Inferred from electronic annotation. Source: InterPro

carbohydrate binding

Inferred from electronic annotation. Source: InterPro

zinc ion binding

Inferred from electronic annotation. Source: InterPro

Complete GO annotation...

Sequences

Sequence LengthMass (Da)Tools
A6LLS1 [UniParc].

Last modified July 24, 2007. Version 1.
Checksum: 9AEDABD669FF3D6A

FASTA988116,059
        10         20         30         40         50         60 
MYRSKDKELN HLKRMLSEIF PYCIIKRTPL EGWKVNKKLI SPPFKWNKNL IIFENEFLLS 

        70         80         90        100        110        120 
EKNVYFRGWF GGESLVYIDG ETVGEINPYH REIDLSHFSD GKKHNIKVET VPRGLFGTKE 

       130        140        150        160        170        180 
EPIFNESFFI KYDIEFKRAL NFVYNVIQVA EETKNNTLSK KLMDLTDEFL SSIHIPRNTE 

       190        200        210        220        230        240 
EYLENALDNP AIINEVKSVW NPPKLKQKNS RDNKEIKEKF LTAFSKYKAK IKEIDIPKYG 

       250        260        270        280        290        300 
KVFLVGHAHI DYAWLWPIDE TKRKINRTFS NAISLSQKYK EFIFTQSSAK MYKDIKETNP 

       310        320        330        340        350        360 
ILFSKIKQKV KGGQWETIGG MWVESDCNIP SAESLIRQFY YGQKFFEKEF GKKSNVCWLP 

       370        380        390        400        410        420 
DVFGFSWILP QILKEANIDY FVTTKLYWNE SNEFPYDLCK WRGLDGSEVI YYSFKNLEEG 

       430        440        450        460        470        480 
YNGKISAKSV LNTFENFRQK DLTSNILLSF GYGDGGGGPT EEMCENYYAL KEIPGIPDIQ 

       490        500        510        520        530        540 
YSQVGNFVKK LPTKNLPTWD GELYLELHRG TLTSQSRIKI LHKKCEDKLR EVEILNVLLD 

       550        560        570        580        590        600 
KDYQKEIDNL WDTVLYNEFH DILPGSSINE VYERAEKELS FVLKKAKEIE DKITGEKTDR 

       610        620        630        640        650        660 
YITIFNPSSF KQKIKFTLDK AFTLELNGKS LKVQKTFDGK FIYYLDETID PLEFLKLKIK 

       670        680        690        700        710        720 
NSKPIFEEGK FKNNPIDFSI NEDGTINLYY EDKYEKNLNT LMLYKDIPYY WENWDIDINY 

       730        740        750        760        770        780 
KKSGIKLEAE NIQTLEEGPL RKVIQITYNI ENSTIRQYYI IWKDSKVVEI KNEIDWHMRR 

       790        800        810        820        830        840 
SLLKALFPTD ILSRIATYDL DIGYIQRPTH KNTNYEKARF EVLGHRWVNL SQYDFGISIL 

       850        860        870        880        890        900 
NNGKYGHHVD RNTIELSLLK SGIYPDFFAD EGKHEFSYAI LPSNDVKETI QAADIFNKNI 

       910        920        930        940        950        960 
IAFYKDLECK RKIEISPDNF KILALKQTNN NIVLRIAEVV GTSGKLKLNI PFSRKISLTN 

       970        980 
ILEEEKIELK SNEITYFPFK IYTLLIEK

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References

[1]"Complete sequence of Thermosipho melanesiensis BI429."
Copeland A., Lucas S., Lapidus A., Barry K., Glavina del Rio T., Dalin E., Tice H., Pitluck S., Chertkov O., Brettin T., Bruce D., Detter J.C., Han C., Schmutz J., Larimer F., Land M., Hauser L., Kyrpides N. expand/collapse author list , Mikhailova N., Nelson K., Gogarten J.P., Noll K., Richardson P.
Submitted (MAY-2007) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: BI429 / DSM 12029.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ		CP000716 Genomic DNA. Translation: ABR30872.1.
RefSeqYP_001306257.1. NC_009616.1.

3D structure databases

ModBaseSearch...

Protein-protein interaction databases

STRINGA6LLS1.

Protein family/group databases

CAZyGH38. Glycoside Hydrolase Family 38.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

GeneID5296492.
GenomeReviewsGene locus Tmel_1011 in contig CP000716_GR.
KEGGtme:Tmel_1011.
NMPDRfig|391009.4.peg.1050.
PATRIC23923265. VBITheMel19269_1053.

Organism-specific databases

CMRSearch...

Phylogenomic databases

eggNOGCOG0383.
HOGENOMHBG286952.
OMAWENWDID.
ProtClustDBCLSK875996.

Family and domain databases

InterProIPR011013. Glyco_hydro-type_carb-bd.
IPR011330. Glyco_hydro/deAcase_b/a-brl.
IPR011682. Glyco_hydro_38_C.
IPR015341. Glyco_hydro_38_cen_dom.
IPR000602. Glyco_hydro_38_core.
[Graphical view]
Gene3DG3DSA:3.20.110.10. Glyco_hydro_38_core. 1 hit.
KOK01191.
PfamPF09261. Alpha-mann_mid. 1 hit.
PF01074. Glyco_hydro_38. 1 hit.
PF07748. Glyco_hydro_38C. 1 hit.
[Graphical view]
SMARTSM00872. Alpha-mann_mid. 1 hit.
[Graphical view]
SUPFAMSSF74650. Gal_mut_like. 1 hit.
SSF88713. Glyco_hydro/deAcase_b/a-brl. 1 hit.
ProtoNetSearch...

Entry information

Entry nameA6LLS1_THEM4
AccessionPrimary (citable) accession number: A6LLS1
Entry history
Integrated into UniProtKB/TrEMBL: July 24, 2007
Last sequence update: July 24, 2007
Last modified: December 14, 2011
This is version 25 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)
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