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Protein
Submitted name:

Type II site-specific deoxyribonuclease

Gene

Tmel_0307

Organism
Thermosipho melanesiensis (strain BI429 / DSM 12029)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Protein predictedi

Functioni

GO - Molecular functioni

GO - Biological processi

Complete GO annotation...

Keywords - Molecular functioni

HydrolaseImported

Enzyme and pathway databases

BioCyciTMEL391009:GHM1-323-MONOMER.

Protein family/group databases

REBASEi15430. TmeBIP.

Names & Taxonomyi

Protein namesi
Submitted name:
Type II site-specific deoxyribonucleaseImported (EC:3.1.21.4Imported)
Gene namesi
Ordered Locus Names:Tmel_0307Imported
OrganismiThermosipho melanesiensis (strain BI429 / DSM 12029)Imported
Taxonomic identifieri391009 [NCBI]
Taxonomic lineageiBacteriaThermotogaeThermotogalesFervidobacteriaceaeThermosipho
ProteomesiUP000001110 Componenti: Chromosome

Interactioni

Protein-protein interaction databases

STRINGi391009.Tmel_0307.

Family & Domainsi

Phylogenomic databases

eggNOGiNOG12396.
HOGENOMiHOG000244578.
KOiK01155.
OMAiTNYYGGG.
OrthoDBiEOG60KN76.

Family and domain databases

InterProiIPR011335. Restrct_endonuc-II-like.
IPR021191. Restrct_endonuc_II_DpmII.
IPR007637. Restrct_endonuc_II_DpmII-like.
[Graphical view]
PfamiPF04556. DpnII. 1 hit.
[Graphical view]
PIRSFiPIRSF016080. Restrict_endonuc_II_DpmII. 1 hit.
SUPFAMiSSF52980. SSF52980. 1 hit.

Sequencei

Sequence statusi: Complete.

A6LJS8-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MDYKEFINSL SDTNATLSYF TDFKKITDKI SKIEIKLHQL NYLIGKRDLR
60 70 80 90 100
KAVYELFNEN PSVFDVLNIL IAVRDKNKKV VNDEGNIVFL KNYFENPESI
110 120 130 140 150
YKYLKETGLE EVFIREDIKN VVDYVFGIEV GLDTNARKNR SGKIMAKIVE
160 170 180 190 200
NIFEKNGIKF SKEIKSDLFP EIMNLGYDLK CFDYVVQTTE KCYLIETNYY
210 220 230 240 250
NVGGSKINET TRAYIEIAKK INEYKNYEFV WITDGKSWLS AKNKIKEAFQ
260 270
HIKHIYNLKT IKRFIEILKE EI
Length:272
Mass (Da):32,088
Last modified:July 24, 2007 - v1
Checksum:iBF85A7DFFD1A55F9
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP000716 Genomic DNA. Translation: ABR30179.1.
RefSeqiWP_012056540.1. NC_009616.1.
YP_001305564.1. NC_009616.1.

Genome annotation databases

EnsemblBacteriaiABR30179; ABR30179; Tmel_0307.
KEGGitme:Tmel_0307.
PATRICi23921731. VBITheMel19269_0317.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP000716 Genomic DNA. Translation: ABR30179.1.
RefSeqiWP_012056540.1. NC_009616.1.
YP_001305564.1. NC_009616.1.

3D structure databases

ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi391009.Tmel_0307.

Protein family/group databases

REBASEi15430. TmeBIP.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiABR30179; ABR30179; Tmel_0307.
KEGGitme:Tmel_0307.
PATRICi23921731. VBITheMel19269_0317.

Phylogenomic databases

eggNOGiNOG12396.
HOGENOMiHOG000244578.
KOiK01155.
OMAiTNYYGGG.
OrthoDBiEOG60KN76.

Enzyme and pathway databases

BioCyciTMEL391009:GHM1-323-MONOMER.

Family and domain databases

InterProiIPR011335. Restrct_endonuc-II-like.
IPR021191. Restrct_endonuc_II_DpmII.
IPR007637. Restrct_endonuc_II_DpmII-like.
[Graphical view]
PfamiPF04556. DpnII. 1 hit.
[Graphical view]
PIRSFiPIRSF016080. Restrict_endonuc_II_DpmII. 1 hit.
SUPFAMiSSF52980. SSF52980. 1 hit.
ProtoNetiSearch...

Publicationsi

  1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: BI429 / DSM 12029Imported.

Entry informationi

Entry nameiA6LJS8_THEM4
AccessioniPrimary (citable) accession number: A6LJS8
Entry historyi
Integrated into UniProtKB/TrEMBL: July 24, 2007
Last sequence update: July 24, 2007
Last modified: June 24, 2015
This is version 46 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported

External Data

Dasty 3

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into Uniref entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.