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A6LJS8

- A6LJS8_THEM4

UniProt

A6LJS8 - A6LJS8_THEM4

Protein
Submitted name:

Type II site-specific deoxyribonuclease

Gene

Tmel_0307

Organism
Thermosipho melanesiensis (strain BI429 / DSM 12029)
Status
Unreviewed - Annotation score: 1 out of 5- Protein predictedi
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    • History
      Entry version 41 (01 Oct 2014)
      Sequence version 1 (24 Jul 2007)
      Previous versions | rss
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    Functioni

    GO - Molecular functioni

    1. DNA binding Source: InterPro
    2. Type II site-specific deoxyribonuclease activity Source: UniProtKB-EC

    GO - Biological processi

    1. DNA restriction-modification system Source: InterPro

    Keywords - Molecular functioni

    HydrolaseImported

    Enzyme and pathway databases

    BioCyciTMEL391009:GHM1-323-MONOMER.

    Protein family/group databases

    REBASEi15430. TmeBIP.

    Names & Taxonomyi

    Protein namesi
    Submitted name:
    Type II site-specific deoxyribonucleaseImported (EC:3.1.21.4Imported)
    Gene namesi
    Ordered Locus Names:Tmel_0307Imported
    OrganismiThermosipho melanesiensis (strain BI429 / DSM 12029)Imported
    Taxonomic identifieri391009 [NCBI]
    Taxonomic lineageiBacteriaThermotogaeThermotogalesThermotogaceaeThermosipho
    ProteomesiUP000001110: Chromosome

    Interactioni

    Protein-protein interaction databases

    STRINGi391009.Tmel_0307.

    Family & Domainsi

    Phylogenomic databases

    eggNOGiNOG12396.
    HOGENOMiHOG000244578.
    KOiK01155.
    OMAiTNYYGGG.
    OrthoDBiEOG60KN76.

    Family and domain databases

    InterProiIPR011335. Restrct_endonuc-II-like.
    IPR021191. Restrct_endonuc_II_DpmII.
    IPR007637. Restrct_endonuc_II_DpmII-like.
    [Graphical view]
    PfamiPF04556. DpnII. 1 hit.
    [Graphical view]
    PIRSFiPIRSF016080. Restrict_endonuc_II_DpmII. 1 hit.
    SUPFAMiSSF52980. SSF52980. 1 hit.

    Sequencei

    Sequence statusi: Complete.

    A6LJS8-1 [UniParc]FASTAAdd to Basket

    « Hide

    MDYKEFINSL SDTNATLSYF TDFKKITDKI SKIEIKLHQL NYLIGKRDLR    50
    KAVYELFNEN PSVFDVLNIL IAVRDKNKKV VNDEGNIVFL KNYFENPESI 100
    YKYLKETGLE EVFIREDIKN VVDYVFGIEV GLDTNARKNR SGKIMAKIVE 150
    NIFEKNGIKF SKEIKSDLFP EIMNLGYDLK CFDYVVQTTE KCYLIETNYY 200
    NVGGSKINET TRAYIEIAKK INEYKNYEFV WITDGKSWLS AKNKIKEAFQ 250
    HIKHIYNLKT IKRFIEILKE EI 272
    Length:272
    Mass (Da):32,088
    Last modified:July 24, 2007 - v1
    Checksum:iBF85A7DFFD1A55F9
    GO

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    CP000716 Genomic DNA. Translation: ABR30179.1.
    RefSeqiWP_012056540.1. NC_009616.1.
    YP_001305564.1. NC_009616.1.

    Genome annotation databases

    EnsemblBacteriaiABR30179; ABR30179; Tmel_0307.
    GeneIDi5297178.
    KEGGitme:Tmel_0307.
    PATRICi23921731. VBITheMel19269_0317.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    CP000716 Genomic DNA. Translation: ABR30179.1 .
    RefSeqi WP_012056540.1. NC_009616.1.
    YP_001305564.1. NC_009616.1.

    3D structure databases

    ModBasei Search...
    MobiDBi Search...

    Protein-protein interaction databases

    STRINGi 391009.Tmel_0307.

    Protein family/group databases

    REBASEi 15430. TmeBIP.

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Genome annotation databases

    EnsemblBacteriai ABR30179 ; ABR30179 ; Tmel_0307 .
    GeneIDi 5297178.
    KEGGi tme:Tmel_0307.
    PATRICi 23921731. VBITheMel19269_0317.

    Phylogenomic databases

    eggNOGi NOG12396.
    HOGENOMi HOG000244578.
    KOi K01155.
    OMAi TNYYGGG.
    OrthoDBi EOG60KN76.

    Enzyme and pathway databases

    BioCyci TMEL391009:GHM1-323-MONOMER.

    Family and domain databases

    InterProi IPR011335. Restrct_endonuc-II-like.
    IPR021191. Restrct_endonuc_II_DpmII.
    IPR007637. Restrct_endonuc_II_DpmII-like.
    [Graphical view ]
    Pfami PF04556. DpnII. 1 hit.
    [Graphical view ]
    PIRSFi PIRSF016080. Restrict_endonuc_II_DpmII. 1 hit.
    SUPFAMi SSF52980. SSF52980. 1 hit.
    ProtoNeti Search...

    Publicationsi

    1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
      Strain: BI429 / DSM 12029Imported.

    Entry informationi

    Entry nameiA6LJS8_THEM4
    AccessioniPrimary (citable) accession number: A6LJS8
    Entry historyi
    Integrated into UniProtKB/TrEMBL: July 24, 2007
    Last sequence update: July 24, 2007
    Last modified: October 1, 2014
    This is version 41 of the entry and version 1 of the sequence. [Complete history]
    Entry statusiUnreviewed (UniProtKB/TrEMBL)

    Miscellaneousi

    Keywords - Technical termi

    Complete proteome, Reference proteomeImported

    External Data

    Dasty 3