A6LJS8 (A6LJS8_THEM4) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
Type II site-specific deoxyribonuclease EMBL ABR30179.1
EC=3.1.21.4 EMBL ABR30179.1

Gene names

Ordered Locus Names:

Tmel_0307

Organism

Thermosipho melanesiensis (strain BI429 / DSM 12029) [Complete proteome] [HAMAP] EMBL ABR30179.1

Taxonomic identifier

391009 [NCBI]

Taxonomic lineage

cellular organisms › Bacteria › Thermotogae › Thermotogae › Thermotogales › Thermotogaceae › Thermosipho › Thermosipho melanesiensis

Protein attributes

Sequence length	272 AA.
Sequence status	Complete.
Protein existence	Predicted

Ontologies

Keywords
Molecular function	Hydrolase EMBL ABR30179.1
Technical term	Complete proteome
Gene Ontology (GO)
Biological_process	DNA restriction-modification system Inferred from electronic annotation. Source: InterPro
Molecular_function	DNA binding Inferred from electronic annotation. Source: InterPro Type II site-specific deoxyribonuclease activity Inferred from electronic annotation. Source: EC
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	A6LJS8 [UniParc]. Last modified July 24, 2007. Version 1. Checksum: BF85A7DFFD1A55F9	FASTA	272	32,088
	10 20 30 40 50 60 MDYKEFINSL SDTNATLSYF TDFKKITDKI SKIEIKLHQL NYLIGKRDLR KAVYELFNEN 70 80 90 100 110 120 PSVFDVLNIL IAVRDKNKKV VNDEGNIVFL KNYFENPESI YKYLKETGLE EVFIREDIKN 130 140 150 160 170 180 VVDYVFGIEV GLDTNARKNR SGKIMAKIVE NIFEKNGIKF SKEIKSDLFP EIMNLGYDLK 190 200 210 220 230 240 CFDYVVQTTE KCYLIETNYY NVGGSKINET TRAYIEIAKK INEYKNYEFV WITDGKSWLS 250 260 270 AKNKIKEAFQ HIKHIYNLKT IKRFIEILKE EI

References

[1]

"Complete sequence of Thermosipho melanesiensis BI429." US DOE Joint Genome Institute Copeland A., Lucas S., Lapidus A., Barry K., Glavina del Rio T., Dalin E., Tice H., Pitluck S., Chertkov O., Brettin T., Bruce D., Detter J.C., Han C., Schmutz J., Larimer F., Land M., Hauser L., Kyrpides N. , Mikhailova N., Nelson K., Gogarten J.P., Noll K., Richardson P. Submitted (MAY-2007) to the EMBL/GenBank/DDBJ databases Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: BI429 / DSM 12029.

Cross-references

Sequence databases
EMBL GenBank DDBJ	CP000716 Genomic DNA. Translation: ABR30179.1.
RefSeq	YP_001305564.1. NC_009616.1.
3D structure databases
ModBase	Search...
Protein-protein interaction databases
STRING	391009.Tmel_0307.
Protein family/group databases
REBASE	15430. TmeBORF308P.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
EnsemblBacteria	ABR30179; ABR30179; Tmel_0307.
GeneID	5297178.
KEGG	tme:Tmel_0307.
PATRIC	23921731. VBITheMel19269_0317.
Organism-specific databases
CMR	Search...
Phylogenomic databases
eggNOG	NOG12396.
HOGENOM	HOG000244578.
KO	K01155.
OMA	TNARKNR.
ProtClustDB	CLSK2791990.
Family and domain databases
InterPro	IPR011335. Restrct_endonuc-II-like. IPR021191. Restrct_endonuc_II_DpmII. IPR007637. Restrct_endonuc_II_DpmII-like. [Graphical view]
Pfam	PF04556. DpnII. 1 hit. [Graphical view]
PIRSF	PIRSF016080. Restrict_endonuc_II_DpmII. 1 hit.
SUPFAM	SSF52980. Restrict_endonuc_II-like_core. 1 hit.
ProtoNet	Search...

Entry information

Entry name

A6LJS8_THEM4

Accession

Primary (citable) accession number: A6LJS8

Entry history

Integrated into UniProtKB/TrEMBL:	July 24, 2007
Last sequence update:	July 24, 2007
Last modified:	May 1, 2013
This is version 33 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)