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A6LJS8 (A6LJS8_THEM4) Unreviewed, UniProtKB/TrEMBL

Last modified February 19, 2014. Version 37. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein names
EC=3.1.21.4 EMBL ABR30179.1
Gene names
Ordered Locus Names:Tmel_0307 EMBL ABR30179.1
OrganismThermosipho melanesiensis (strain BI429 / DSM 12029) [Complete proteome] [HAMAP] EMBL ABR30179.1
Taxonomic identifier391009 [NCBI]
Taxonomic lineageBacteriaThermotogaeThermotogalesThermotogaceaeThermosipho

Protein attributes

Sequence length272 AA.
Sequence statusComplete.
Protein existencePredicted

Sequences

Sequence LengthMass (Da)Tools
A6LJS8 [UniParc].

Last modified July 24, 2007. Version 1.
Checksum: BF85A7DFFD1A55F9

FASTA27232,088
        10         20         30         40         50         60 
MDYKEFINSL SDTNATLSYF TDFKKITDKI SKIEIKLHQL NYLIGKRDLR KAVYELFNEN 

        70         80         90        100        110        120 
PSVFDVLNIL IAVRDKNKKV VNDEGNIVFL KNYFENPESI YKYLKETGLE EVFIREDIKN 

       130        140        150        160        170        180 
VVDYVFGIEV GLDTNARKNR SGKIMAKIVE NIFEKNGIKF SKEIKSDLFP EIMNLGYDLK 

       190        200        210        220        230        240 
CFDYVVQTTE KCYLIETNYY NVGGSKINET TRAYIEIAKK INEYKNYEFV WITDGKSWLS 

       250        260        270 
AKNKIKEAFQ HIKHIYNLKT IKRFIEILKE EI 

« Hide

References

[1]"Complete sequence of Thermosipho melanesiensis BI429."
US DOE Joint Genome Institute
Copeland A., Lucas S., Lapidus A., Barry K., Glavina del Rio T., Dalin E., Tice H., Pitluck S., Chertkov O., Brettin T., Bruce D., Detter J.C., Han C., Schmutz J., Larimer F., Land M., Hauser L., Kyrpides N. expand/collapse author list , Mikhailova N., Nelson K., Gogarten J.P., Noll K., Richardson P.
Submitted (MAY-2007) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: BI429 / DSM 12029.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
CP000716 Genomic DNA. Translation: ABR30179.1.
RefSeqYP_001305564.1. NC_009616.1.

3D structure databases

ModBaseSearch...
MobiDBSearch...

Protein-protein interaction databases

STRING391009.Tmel_0307.

Protein family/group databases

REBASE15430. TmeBIP.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaABR30179; ABR30179; Tmel_0307.
GeneID5297178.
KEGGtme:Tmel_0307.
PATRIC23921731. VBITheMel19269_0317.

Organism-specific databases

CMRSearch...

Phylogenomic databases

eggNOGNOG12396.
HOGENOMHOG000244578.
KOK01155.
OMARKNRGGH.
OrthoDBEOG60KN76.
ProtClustDBCLSK2791990.

Enzyme and pathway databases

BioCycTMEL391009:GHM1-323-MONOMER.

Family and domain databases

InterProIPR011335. Restrct_endonuc-II-like.
IPR021191. Restrct_endonuc_II_DpmII.
IPR007637. Restrct_endonuc_II_DpmII-like.
[Graphical view]
PfamPF04556. DpnII. 1 hit.
[Graphical view]
PIRSFPIRSF016080. Restrict_endonuc_II_DpmII. 1 hit.
SUPFAMSSF52980. SSF52980. 1 hit.
ProtoNetSearch...

Entry information

Entry nameA6LJS8_THEM4
AccessionPrimary (citable) accession number: A6LJS8
Entry history
Integrated into UniProtKB/TrEMBL: July 24, 2007
Last sequence update: July 24, 2007
Last modified: February 19, 2014
This is version 37 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)