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Protein
Submitted name:

Channel protein, hemolysin III family

Gene

Tmel_0092

Organism
Thermosipho melanesiensis (strain BI429 / DSM 12029)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Protein predictedi

Functioni

GO - Biological processi

  1. cytolysis Source: InterPro
Complete GO annotation...

Enzyme and pathway databases

BioCyciTMEL391009:GHM1-97-MONOMER.

Names & Taxonomyi

Protein namesi
Submitted name:
Channel protein, hemolysin III familyImported
Gene namesi
Ordered Locus Names:Tmel_0092Imported
OrganismiThermosipho melanesiensis (strain BI429 / DSM 12029)Imported
Taxonomic identifieri391009 [NCBI]
Taxonomic lineageiBacteriaThermotogaeThermotogalesThermotogaceaeThermosipho
ProteomesiUP000001110: Chromosome

Subcellular locationi

GO - Cellular componenti

  1. integral component of membrane Source: InterPro
Complete GO annotation...

Interactioni

Protein-protein interaction databases

STRINGi391009.Tmel_0092.

Family & Domainsi

Phylogenomic databases

eggNOGiCOG1272.
HOGENOMiHOG000039438.
KOiK11068.
OMAiMSHEKPL.
OrthoDBiEOG6QG8NQ.

Family and domain databases

InterProiIPR004254. AdipoR/HlyIII-related.
IPR005744. Hy-lIII.
[Graphical view]
PANTHERiPTHR20855. PTHR20855. 1 hit.
PTHR20855:SF3. PTHR20855:SF3. 1 hit.
PfamiPF03006. HlyIII. 1 hit.
[Graphical view]
TIGRFAMsiTIGR01065. hlyIII. 1 hit.

Sequencei

Sequence statusi: Complete.

A6LJ68-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MKNLEKYTLG EEIANAVTHG VGALAALFGL IWLIIYSSFG TPLKIVSFTI
60 70 80 90 100
YGCSLFFLYL ISTLYHSMCN QKAKYIFEIM DHSAIFLLIA GTYTPFLLMV
110 120 130 140 150
IKGSLGWTLF AVVWVLAIFG MVFKVFFVRD FMVVSTLIYI LMGWMIVFFI
160 170 180 190 200
KKLIMNFNSF GITLLVIGGV LYTLGSIFYM YRKIKYHHMI WHLFVIAGSV

FHYLAILQI
Length:209
Mass (Da):23,979
Last modified:July 24, 2007 - v1
Checksum:iC8246A148D0015C3
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP000716 Genomic DNA. Translation: ABR29969.1.
RefSeqiYP_001305354.1. NC_009616.1.

Genome annotation databases

EnsemblBacteriaiABR29969; ABR29969; Tmel_0092.
GeneIDi5296881.
KEGGitme:Tmel_0092.
PATRICi23921271. VBITheMel19269_0097.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP000716 Genomic DNA. Translation: ABR29969.1.
RefSeqiYP_001305354.1. NC_009616.1.

3D structure databases

ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi391009.Tmel_0092.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiABR29969; ABR29969; Tmel_0092.
GeneIDi5296881.
KEGGitme:Tmel_0092.
PATRICi23921271. VBITheMel19269_0097.

Phylogenomic databases

eggNOGiCOG1272.
HOGENOMiHOG000039438.
KOiK11068.
OMAiMSHEKPL.
OrthoDBiEOG6QG8NQ.

Enzyme and pathway databases

BioCyciTMEL391009:GHM1-97-MONOMER.

Family and domain databases

InterProiIPR004254. AdipoR/HlyIII-related.
IPR005744. Hy-lIII.
[Graphical view]
PANTHERiPTHR20855. PTHR20855. 1 hit.
PTHR20855:SF3. PTHR20855:SF3. 1 hit.
PfamiPF03006. HlyIII. 1 hit.
[Graphical view]
TIGRFAMsiTIGR01065. hlyIII. 1 hit.
ProtoNetiSearch...

Publicationsi

  1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: BI429 / DSM 12029Imported.

Entry informationi

Entry nameiA6LJ68_THEM4
AccessioniPrimary (citable) accession number: A6LJ68
Entry historyi
Integrated into UniProtKB/TrEMBL: July 24, 2007
Last sequence update: July 24, 2007
Last modified: January 7, 2015
This is version 39 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported

External Data

Dasty 3

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into Uniref entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.