A6LJ68 (A6LJ68_THEM4) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
Channel protein, hemolysin III family EMBL ABR29969.1

Gene names

Ordered Locus Names:

Tmel_0092

Organism

Thermosipho melanesiensis (strain BI429 / DSM 12029) [Complete proteome] [HAMAP] EMBL ABR29969.1

Taxonomic identifier

391009 [NCBI]

Taxonomic lineage

cellular organisms › Bacteria › Thermotogae › Thermotogae › Thermotogales › Thermotogaceae › Thermosipho › Thermosipho melanesiensis

Protein attributes

Sequence length	209 AA.
Sequence status	Complete.
Protein existence	Predicted

Ontologies

Keywords
Technical term	Complete proteome
Gene Ontology (GO)
Biological_process	cytolysis Inferred from electronic annotation. Source: InterPro
Cellular_component	integral to membrane Inferred from electronic annotation. Source: InterPro
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	A6LJ68 [UniParc]. Last modified July 24, 2007. Version 1. Checksum: C8246A148D0015C3	FASTA	209	23,979
	10 20 30 40 50 60 MKNLEKYTLG EEIANAVTHG VGALAALFGL IWLIIYSSFG TPLKIVSFTI YGCSLFFLYL 70 80 90 100 110 120 ISTLYHSMCN QKAKYIFEIM DHSAIFLLIA GTYTPFLLMV IKGSLGWTLF AVVWVLAIFG 130 140 150 160 170 180 MVFKVFFVRD FMVVSTLIYI LMGWMIVFFI KKLIMNFNSF GITLLVIGGV LYTLGSIFYM 190 200 YRKIKYHHMI WHLFVIAGSV FHYLAILQI

References

[1]

"Complete sequence of Thermosipho melanesiensis BI429." US DOE Joint Genome Institute Copeland A., Lucas S., Lapidus A., Barry K., Glavina del Rio T., Dalin E., Tice H., Pitluck S., Chertkov O., Brettin T., Bruce D., Detter J.C., Han C., Schmutz J., Larimer F., Land M., Hauser L., Kyrpides N. , Mikhailova N., Nelson K., Gogarten J.P., Noll K., Richardson P. Submitted (MAY-2007) to the EMBL/GenBank/DDBJ databases Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: BI429 / DSM 12029.

Cross-references

Sequence databases
EMBL GenBank DDBJ	CP000716 Genomic DNA. Translation: ABR29969.1.
RefSeq	YP_001305354.1. NC_009616.1.
3D structure databases
ModBase	Search...
Protein-protein interaction databases
STRING	391009.Tmel_0092.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
EnsemblBacteria	ABR29969; ABR29969; Tmel_0092.
GeneID	5296881.
KEGG	tme:Tmel_0092.
PATRIC	23921271. VBITheMel19269_0097.
Organism-specific databases
CMR	Search...
Phylogenomic databases
eggNOG	COG1272.
HOGENOM	HOG000039438.
KO	K11068.
OMA	WAEEIAN.
Family and domain databases
InterPro	IPR004254. HlyIII-related. IPR005744. HylIII. [Graphical view]
PANTHER	PTHR20855. PTHR20855. 1 hit. PTHR20855:SF3. PTHR20855:SF3. 1 hit.
Pfam	PF03006. HlyIII. 1 hit. [Graphical view]
TIGRFAMs	TIGR01065. hlyIII. 1 hit.
ProtoNet	Search...

Entry information

Entry name

A6LJ68_THEM4

Accession

Primary (citable) accession number: A6LJ68

Entry history

Integrated into UniProtKB/TrEMBL:	July 24, 2007
Last sequence update:	July 24, 2007
Last modified:	May 1, 2013
This is version 33 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)