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A6LI80 (A6LI80_PARD8) Unreviewed, UniProtKB/TrEMBL

Last modified December 14, 2011. Version 39. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein namesRecommended name:
Glutamate racemase HAMAP MF_00258
EC=5.1.1.3 HAMAP MF_00258
Gene names
Name:murI HAMAP MF_00258
Ordered Locus Names:BDI_3702
OrganismParabacteroides distasonis (strain ATCC 8503 / DSM 20701 / NCTC 11152) [Complete proteome] [HAMAP]
Taxonomic identifier435591 [NCBI]
Taxonomic lineageBacteria › Bacteroidetes › Bacteroidia › Bacteroidales › Porphyromonadaceae › Parabacteroides

Protein attributes

Sequence length276 AA.
Sequence statusComplete.
Protein existenceInferred from homology

General annotation (Comments)

Function

Provides the (R)-glutamate required for cell wall biosynthesis By similarity. HAMAP MF_00258 SAAS SAAS015942

Catalytic activity

L-glutamate = D-glutamate. HAMAP MF_00258 SAAS SAAS015942

Pathway

Cell wall biogenesis; peptidoglycan biosynthesis. HAMAP MF_00258 SAAS SAAS015942

Sequence similarities

Belongs to the aspartate/glutamate racemases family. HAMAP MF_00258

Sequences

Sequence LengthMass (Da)Tools
A6LI80 [UniParc].

Last modified July 24, 2007. Version 1.
Checksum: C860CDC66B85AD56

FASTA27630,755
        10         20         30         40         50         60 
MFPQTPGPIG LFDSGYGGLT IFDKIHQLMP GYDYVYLGDN ARSPYGTRSF EVVYQFTRQA 

        70         80         90        100        110        120 
VSRLFESGCQ LVILACNTAS AKALRTIQQK DLPTWDPNRR VLGVIRPTVE LVDTISRTKH 

       130        140        150        160        170        180 
IGIVGTSGTI TSNSYTIEIG RMYPHIQVTG EACPMWVPLV ENNEFNSPGA DYFVKKHIDH 

       190        200        210        220        230        240 
LLSVDPQIDT LILGCTHYPL LMDKIRAFLP SGITLFSQGE HVAESLRDYL GRHPEMDRKL 

       250        260        270 
TKGGSCRFLT TESAEKFSEA ASIFMNTPVS VSQIEL

« Hide

References

[1]"Evolution of symbiotic bacteria in the distal human intestine."
Xu J., Mahowald M.A., Ley R.E., Lozupone C.A., Hamady M., Martens E.C., Henrissat B., Coutinho P.M., Minx P., Latreille P., Cordum H., Van Brunt A., Kim K., Fulton R.S., Fulton L.A., Clifton S.W., Wilson R.K., Knight R.D., Gordon J.I.
PLoS Biol. 5:1574-1586(2007) [PubMed: 17579514] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].

Cross-references

Sequence databases

EMBL
GenBank
DDBJ		CP000140 Genomic DNA. Translation: ABR45394.1.
RefSeqYP_001305016.1. NC_009615.1.

3D structure databases

ProteinModelPortalA6LI80.
ModBaseSearch...

Protein-protein interaction databases

STRINGA6LI80.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

GeneID5308851.
GenomeReviewsGene locus BDI_3702 in contig CP000140_GR.
KEGGpdi:BDI_3702.
PATRIC22850632. VBIParDis29947_3660.

Organism-specific databases

CMRSearch...

Phylogenomic databases

eggNOGCOG0796.
HOGENOMHBG645102.
OMAKVEFHAS.
ProtClustDBCLSK823616.

Enzyme and pathway databases

BioCycPDIS435591:BDI_3702-MONOMER.

Family and domain databases

HAMAPMF_00258. Glu_racemase.
[Tree]
InterProIPR015942. Asp/Glu/hydantoin_racemase.
IPR001920. Asp/Glu_race.
IPR018187. Asp/Glu_racemase_AS.
IPR004391. Glu_race.
[Graphical view]
Gene3DG3DSA:3.40.50.1860. Asp/Glu_race. 1 hit.
KOK01776.
PANTHERPTHR21198. PTHR21198. 1 hit.
PfamPF01177. Asp_Glu_race. 1 hit.
[Graphical view]
SUPFAMSSF53681. Asp/Glu_race. 2 hits.
TIGRFAMsTIGR00067. Glut_race. 1 hit.
PROSITEPS00923. ASP_GLU_RACEMASE_1. 1 hit.
PS00924. ASP_GLU_RACEMASE_2. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameA6LI80_PARD8
AccessionPrimary (citable) accession number: A6LI80
Entry history
Integrated into UniProtKB/TrEMBL: July 24, 2007
Last sequence update: July 24, 2007
Last modified: December 14, 2011
This is version 39 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)
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