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A6LGX9 (A6LGX9_PARD8) Unreviewed, UniProtKB/TrEMBL

Last modified January 25, 2012. Version 35. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein names
Gene names
Ordered Locus Names:BDI_3238
OrganismParabacteroides distasonis (strain ATCC 8503 / DSM 20701 / NCTC 11152) [Complete proteome] [HAMAP]
Taxonomic identifier435591 [NCBI]
Taxonomic lineageBacteriaBacteroidetesBacteroidiaBacteroidalesPorphyromonadaceaeParabacteroides

Protein attributes

Sequence length416 AA.
Sequence statusComplete.
Protein existencePredicted

Sequences

Sequence LengthMass (Da)Tools
A6LGX9 [UniParc].

Last modified July 24, 2007. Version 1.
Checksum: BB44803B53F9EAB6

FASTA41646,739
        10         20         30         40         50         60 
MNTDIKIAVA GTGYVGMSIA TLLAQHHQVI AVDVIPEKVE KINHQVSPIQ DEYIEKYLAE 

        70         80         90        100        110        120 
KPLNLTATLN GATAYRDADF VVIAAPTNYD PVKNYFDTSH VEEVIELVKS VNPNAIMVIK 

       130        140        150        160        170        180 
STIPVGYTES VRKKLDTENV IFSPEFLRES KALYDNLYPS RIIVGRPEGD KRLGEAARTF 

       190        200        210        220        230        240 
AALLQEGAMK KNIDTLFMGL TEAEAVKLFA NTYLALRVSY FNELDTYAEM KGLDTQAIIN 

       250        260        270        280        290        300 
GVSLDPRIGT HYNNPSFGYG GYCLPKDTKQ LLANYANVPE NLIQAIVESN RTRKDFIADR 

       310        320        330        340        350        360 
VLNKAGYYDY YNRGDFNPNE ERKCVIGVYR LTMKSNSDNF RQSSIQGVMK RIKAKGAEVI 

       370        380        390        400        410 
IYEPTLEDGS TFFGSKVVND LNTFKRQCQA IIANRYDACL DDVNGKVYSR DVFRRD 

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References

[1]"Evolution of symbiotic bacteria in the distal human intestine."
Xu J., Mahowald M.A., Ley R.E., Lozupone C.A., Hamady M., Martens E.C., Henrissat B., Coutinho P.M., Minx P., Latreille P., Cordum H., Van Brunt A., Kim K., Fulton R.S., Fulton L.A., Clifton S.W., Wilson R.K., Knight R.D., Gordon J.I.
PLoS Biol. 5:1574-1586(2007) [PubMed: 17579514] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
CP000140 Genomic DNA. Translation: ABR44943.1.
RefSeqYP_001304565.1. NC_009615.1.

3D structure databases

ProteinModelPortalA6LGX9.
SMRA6LGX9. Positions 5-416.
ModBaseSearch...

Protein-protein interaction databases

STRINGA6LGX9.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

GeneID5308387.
GenomeReviewsGene locus BDI_3238 in contig CP000140_GR.
KEGGpdi:BDI_3238.
PATRIC22849684. VBIParDis29947_3198.

Organism-specific databases

CMRSearch...

Phylogenomic databases

eggNOGCOG1004.
HOGENOMHBG400967.
OMALNFRATT.
ProtClustDBCLSK2538789.

Enzyme and pathway databases

BioCycPDIS435591:BDI_3238-MONOMER.

Family and domain databases

InterProIPR008927. 6-PGluconate_DH_C-like.
IPR013328. DH_multihelical.
IPR016040. NAD(P)-bd_dom.
IPR017476. Nucleotide_sugar_DH.
IPR014027. UDP-Glc/GDP-Man_DH_C.
IPR014026. UDP-Glc/GDP-Man_DH_dimer.
IPR001732. UDP-Glc/GDP-Man_DH_N.
[Graphical view]
Gene3DG3DSA:3.40.50.720. NAD(P)-bd. 1 hit.
G3DSA:1.10.1040.10. Opine_DH. 1 hit.
G3DSA:3.40.50.1870. UDP-Glc/GDP-Man_DH_C. 1 hit.
KOK00012.
PfamPF00984. UDPG_MGDP_dh. 1 hit.
PF03720. UDPG_MGDP_dh_C. 1 hit.
PF03721. UDPG_MGDP_dh_N. 1 hit.
[Graphical view]
PIRSFPIRSF000124. UDPglc_GDPman_dh. 1 hit.
SMARTSM00984. UDPG_MGDP_dh_C. 1 hit.
[Graphical view]
SUPFAMSSF48179. 6DGDH_C_like. 1 hit.
SSF52413. UDP-Glc/GDP-Man_DH_C. 1 hit.
TIGRFAMsTIGR03026. NDP-sugDHase. 1 hit.
ProtoNetSearch...

Entry information

Entry nameA6LGX9_PARD8
AccessionPrimary (citable) accession number: A6LGX9
Entry history
Integrated into UniProtKB/TrEMBL: July 24, 2007
Last sequence update: July 24, 2007
Last modified: January 25, 2012
This is version 35 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)