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A6LEM8 (A6LEM8_PARD8) Unreviewed, UniProtKB/TrEMBL

Last modified December 14, 2011. Version 24. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein names
Gene names
Ordered Locus Names:BDI_2417
OrganismParabacteroides distasonis (strain ATCC 8503 / DSM 20701 / NCTC 11152) [Complete proteome] [HAMAP]
Taxonomic identifier435591 [NCBI]
Taxonomic lineageBacteriaBacteroidetesBacteroidiaBacteroidalesPorphyromonadaceaeParabacteroides

Protein attributes

Sequence length498 AA.
Sequence statusComplete.
Protein existencePredicted

Ontologies

Sequences

Sequence LengthMass (Da)Tools
A6LEM8 [UniParc].

Last modified July 24, 2007. Version 1.
Checksum: 864D0B8081242D64

FASTA49854,224
        10         20         30         40         50         60 
MALKFITAEE AASYVHHNDN VGFSGFTPAG CPKVVPGAIA RKAAEEHAKG NPFQIGMFTG 

        70         80         90        100        110        120 
ASTGDKLDGE LARANAIKFR TPYQSNKDLR AALNAHQAQY FDLHLSELAQ SLRYGFLGKI 

       130        140        150        160        170        180 
DVAIVEAADV TEDGEIVPTS GVGILPTICR MADRIIVELN CRHPKEIRGM HDIYEPADPP 

       190        200        210        220        230        240 
LRREIPIYTP SDRIGNDCVK VDPAKIVGVV RTDEPNEGGK FSPLDDVTMA IGKNVADFLV 

       250        260        270        280        290        300 
SEIKAGRLPK EFVPLQSGVG NVANAVLGCM GANESIPAFN VYTEVIQDAV IELMKQGRVK 

       310        320        330        340        350        360 
FASGCSLSVS NEVIREIYAN LDFFKDKILL RPQEISNNPE VARRLGLIAI NTALEADIFG 

       370        380        390        400        410        420 
NINSTHVSGT RMMNGIGGSG DFTRSAMLSI FTTPSTAKEG KISAFVPMVS HLDHSEHSVK 

       430        440        450        460        470        480 
IIITEYGVAD LRGKSPIQRA RCIIDNCVHP DYKPLLEEYL AMGIKGHTPQ NLKCCFAFHE 

       490 
ELAASGDMHN VDWSKYNK 

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References

[1]"Evolution of symbiotic bacteria in the distal human intestine."
Xu J., Mahowald M.A., Ley R.E., Lozupone C.A., Hamady M., Martens E.C., Henrissat B., Coutinho P.M., Minx P., Latreille P., Cordum H., Van Brunt A., Kim K., Fulton R.S., Fulton L.A., Clifton S.W., Wilson R.K., Knight R.D., Gordon J.I.
PLoS Biol. 5:1574-1586(2007) [PubMed: 17579514] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
CP000140 Genomic DNA. Translation: ABR44142.1.
RefSeqYP_001303764.1. NC_009615.1.

3D structure databases

ProteinModelPortalA6LEM8.
SMRA6LEM8. Positions 2-496.
ModBaseSearch...

Protein-protein interaction databases

STRINGA6LEM8.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

GeneID5307566.
GenomeReviewsGene locus BDI_2417 in contig CP000140_GR.
KEGGpdi:BDI_2417.
PATRIC22848058. VBIParDis29947_2404.

Organism-specific databases

CMRSearch...

Phylogenomic databases

eggNOGCOG0427.
HOGENOMHBG289696.
OMAAYLEIAT.
ProtClustDBCLSK869356.

Enzyme and pathway databases

BioCycPDIS435591:BDI_2417-MONOMER.

Family and domain databases

InterProIPR003702. ActCoA_hydro.
IPR006472. Citrate_lyase_asu.
IPR017821. Succinate_CoA_transferase.
[Graphical view]
PANTHERPTHR21432. ActCoA_hydro. 1 hit.
PTHR21432:SF10. PTHR21432:SF10. 1 hit.
PfamPF02550. AcetylCoA_hydro. 1 hit.
PF04223. CitF. 1 hit.
[Graphical view]
TIGRFAMsTIGR03458. YgfH_subfam. 1 hit.
ProtoNetSearch...

Entry information

Entry nameA6LEM8_PARD8
AccessionPrimary (citable) accession number: A6LEM8
Entry history
Integrated into UniProtKB/TrEMBL: July 24, 2007
Last sequence update: July 24, 2007
Last modified: December 14, 2011
This is version 24 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)