A6LA77 (A6LA77_PARD8) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
Glutamate decarboxylase EMBL ABR42591.1

Gene names

Ordered Locus Names:

BDI_0821

Organism

Parabacteroides distasonis (strain ATCC 8503 / DSM 20701 / NCTC 11152) [Complete proteome] [HAMAP] EMBL ABR42591.1

Taxonomic identifier

435591 [NCBI]

Taxonomic lineage

cellular organisms › Bacteria › Bacteroidetes/Chlorobi group › Bacteroidetes › Bacteroidia › Bacteroidales › Porphyromonadaceae › Parabacteroides › Parabacteroides distasonis

Protein attributes

Sequence length	479 AA.
Sequence status	Complete.
Protein existence	Inferred from homology

General annotation (Comments)

Cofactor	Pyridoxal phosphate By similarity. RuleBase RU000382
Sequence similarities	Belongs to the group II decarboxylase family. RuleBase RU000382

Ontologies

Keywords
Ligand	Pyridoxal phosphate RuleBase RU000382
Molecular function	Lyase RuleBase RU000382
Technical term	Complete proteome
Gene Ontology (GO)
Biological_process	glutamate metabolic process Inferred from electronic annotation. Source: InterPro
Molecular_function	glutamate decarboxylase activity Inferred from electronic annotation. Source: InterPro pyridoxal phosphate binding Inferred from electronic annotation. Source: InterPro
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	A6LA77 [UniParc]. Last modified July 24, 2007. Version 1. Checksum: 8B656D1E891F8A61	FASTA	479	54,452
	10 20 30 40 50 60 MKDSNFRNGD AKTAIFGSEV MLTPSPVDKI PDGPTTPEIA YQMVKDETFA QTQPRLNLAT 70 80 90 100 110 120 FVTTYMDEYA TKLMNEAINI NYIDETEYPR IAVMNAKCIN IMASLWNSPE QEKWKTGALA 130 140 150 160 170 180 IGSSEACMLG GVAAWLRWRK KRQAQGKPTD KPNFVISTGF QVVWEKFAQL WQIEMREVPL 190 200 210 220 230 240 TLDKTTLDPE EALKMCDENT ICIVPIQGVT WTGLNDDVEA LDKALDAYNA KTGYDIPIHV 250 260 270 280 290 300 DAASGGFILP FLSPETKWDF RLKWVLSIST SGHKFGLVYP GLGWVVWKDK KYLPEEMAFS 310 320 330 340 350 360 VNYLGANITQ VGLNFSRPAA QILGQYYQFI RLGFEGYKQI QYNSMEITKY IHQEIGKMAP 370 380 390 400 410 420 FVNYSNEVVN PLFIWYMKPD YAKNAKWTLY DLQDKLQQSG WMVPAYTLPK KLDNYVVMRV 430 440 450 460 470 VVRQGFSRDM ADMLLGDIKN AVEALEKLEY PTPTRIAQDK NVPVKGKVFT HTAMSNAKK

References

[1]

"Evolution of symbiotic bacteria in the distal human intestine." Xu J., Mahowald M.A., Ley R.E., Lozupone C.A., Hamady M., Martens E.C., Henrissat B., Coutinho P.M., Minx P., Latreille P., Cordum H., Van Brunt A., Kim K., Fulton R.S., Fulton L.A., Clifton S.W., Wilson R.K., Knight R.D., Gordon J.I. PLoS Biol. 5:1574-1586(2007) [PubMed] [Europe PMC] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: ATCC 8503 / DSM 20701 / NCTC 11152.

Cross-references

Sequence databases
EMBL GenBank DDBJ	CP000140 Genomic DNA. Translation: ABR42591.1.
RefSeq	YP_001302213.1. NC_009615.1.
3D structure databases
ProteinModelPortal	A6LA77.
ModBase	Search...
Protein-protein interaction databases
STRING	435591.BDI_0821.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
EnsemblBacteria	ABR42591; ABR42591; BDI_0821.
GeneID	5305975.
KEGG	pdi:BDI_0821.
PATRIC	22844784. VBIParDis29947_0801.
Organism-specific databases
CMR	Search...
Phylogenomic databases
eggNOG	COG0076.
HOGENOM	HOG000070228.
KO	K01580.
OMA	ISKDAAY.
ProtClustDB	CLSK823211.
Family and domain databases
Gene3D	3.40.640.10. 1 hit.
InterPro	IPR010107. Glutamate_decarboxylase. IPR002129. PyrdxlP-dep_de-COase. IPR015424. PyrdxlP-dep_Trfase. IPR015421. PyrdxlP-dep_Trfase_major_sub1. [Graphical view]
PANTHER	PTHR11999:SF1. PTHR11999:SF1. 1 hit.
Pfam	PF00282. Pyridoxal_deC. 1 hit. [Graphical view]
SUPFAM	SSF53383. PyrdxlP-dep_Trfase_major. 1 hit.
TIGRFAMs	TIGR01788. Glu-decarb-GAD. 1 hit.
ProtoNet	Search...

Entry information

Entry name

A6LA77_PARD8

Accession

Primary (citable) accession number: A6LA77

Entry history

Integrated into UniProtKB/TrEMBL:	July 24, 2007
Last sequence update:	July 24, 2007
Last modified:	May 1, 2013
This is version 42 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)