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Protein

Glutamate decarboxylase

Gene

BDI_0821

Organism
Parabacteroides distasonis (strain ATCC 8503 / DSM 20701 / CIP 104284 / JCM 5825 / NCTC 11152)
Status
Unreviewed-Annotation score: Annotation score: 2 out of 5-Protein inferred from homologyi

Functioni

Catalytic activityi

L-glutamate = 4-aminobutanoate + CO2.UniRule annotation

Cofactori

pyridoxal 5'-phosphateUniRule annotation

GO - Molecular functioni

GO - Biological processi

Complete GO annotation...

Keywords - Molecular functioni

DecarboxylaseUniRule annotation, Lyase

Keywords - Ligandi

Pyridoxal phosphateUniRule annotation

Names & Taxonomyi

Protein namesi
Recommended name:
Glutamate decarboxylaseUniRule annotation (EC:4.1.1.15UniRule annotation)
Gene namesi
Ordered Locus Names:BDI_0821Imported
OrganismiParabacteroides distasonis (strain ATCC 8503 / DSM 20701 / CIP 104284 / JCM 5825 / NCTC 11152)Imported
Taxonomic identifieri435591 [NCBI]
Taxonomic lineageiBacteriaBacteroidetesBacteroidiaBacteroidalesPorphyromonadaceaeParabacteroides
Proteomesi
  • UP000000566 Componenti: Chromosome

PTM / Processingi

Amino acid modifications

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Modified residuei274N6-(pyridoxal phosphate)lysineUniRule annotation1

Interactioni

Protein-protein interaction databases

STRINGi435591.BDI_0821.

Structurei

3D structure databases

ProteinModelPortaliA6LA77.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Sequence similaritiesi

Belongs to the group II decarboxylase family.UniRule annotation

Phylogenomic databases

eggNOGiENOG4105CVK. Bacteria.
COG0076. LUCA.
HOGENOMiHOG000070228.
KOiK01580.
OMAiYTGRLFT.
OrthoDBiPOG091H06F5.

Family and domain databases

Gene3Di3.40.640.10. 1 hit.
InterProiIPR010107. Glutamate_decarboxylase.
IPR002129. PyrdxlP-dep_de-COase.
IPR015424. PyrdxlP-dep_Trfase.
IPR015421. PyrdxlP-dep_Trfase_major_sub1.
[Graphical view]
PfamiPF00282. Pyridoxal_deC. 1 hit.
[Graphical view]
SUPFAMiSSF53383. SSF53383. 1 hit.
TIGRFAMsiTIGR01788. Glu-decarb-GAD. 1 hit.

Sequencei

Sequence statusi: Complete.

A6LA77-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MKDSNFRNGD AKTAIFGSEV MLTPSPVDKI PDGPTTPEIA YQMVKDETFA
60 70 80 90 100
QTQPRLNLAT FVTTYMDEYA TKLMNEAINI NYIDETEYPR IAVMNAKCIN
110 120 130 140 150
IMASLWNSPE QEKWKTGALA IGSSEACMLG GVAAWLRWRK KRQAQGKPTD
160 170 180 190 200
KPNFVISTGF QVVWEKFAQL WQIEMREVPL TLDKTTLDPE EALKMCDENT
210 220 230 240 250
ICIVPIQGVT WTGLNDDVEA LDKALDAYNA KTGYDIPIHV DAASGGFILP
260 270 280 290 300
FLSPETKWDF RLKWVLSIST SGHKFGLVYP GLGWVVWKDK KYLPEEMAFS
310 320 330 340 350
VNYLGANITQ VGLNFSRPAA QILGQYYQFI RLGFEGYKQI QYNSMEITKY
360 370 380 390 400
IHQEIGKMAP FVNYSNEVVN PLFIWYMKPD YAKNAKWTLY DLQDKLQQSG
410 420 430 440 450
WMVPAYTLPK KLDNYVVMRV VVRQGFSRDM ADMLLGDIKN AVEALEKLEY
460 470
PTPTRIAQDK NVPVKGKVFT HTAMSNAKK
Length:479
Mass (Da):54,452
Last modified:July 24, 2007 - v1
Checksum:i8B656D1E891F8A61
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP000140 Genomic DNA. Translation: ABR42591.1.
RefSeqiWP_005857385.1. NC_009615.1.

Genome annotation databases

EnsemblBacteriaiABR42591; ABR42591; BDI_0821.
GeneIDi5305975.
KEGGipdi:BDI_0821.
PATRICi22844784. VBIParDis29947_0801.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP000140 Genomic DNA. Translation: ABR42591.1.
RefSeqiWP_005857385.1. NC_009615.1.

3D structure databases

ProteinModelPortaliA6LA77.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi435591.BDI_0821.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiABR42591; ABR42591; BDI_0821.
GeneIDi5305975.
KEGGipdi:BDI_0821.
PATRICi22844784. VBIParDis29947_0801.

Phylogenomic databases

eggNOGiENOG4105CVK. Bacteria.
COG0076. LUCA.
HOGENOMiHOG000070228.
KOiK01580.
OMAiYTGRLFT.
OrthoDBiPOG091H06F5.

Family and domain databases

Gene3Di3.40.640.10. 1 hit.
InterProiIPR010107. Glutamate_decarboxylase.
IPR002129. PyrdxlP-dep_de-COase.
IPR015424. PyrdxlP-dep_Trfase.
IPR015421. PyrdxlP-dep_Trfase_major_sub1.
[Graphical view]
PfamiPF00282. Pyridoxal_deC. 1 hit.
[Graphical view]
SUPFAMiSSF53383. SSF53383. 1 hit.
TIGRFAMsiTIGR01788. Glu-decarb-GAD. 1 hit.
ProtoNetiSearch...

Entry informationi

Entry nameiA6LA77_PARD8
AccessioniPrimary (citable) accession number: A6LA77
Entry historyi
Integrated into UniProtKB/TrEMBL: July 24, 2007
Last sequence update: July 24, 2007
Last modified: November 2, 2016
This is version 61 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.