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A6LA39

- A6LA39_PARD8

UniProt

A6LA39 - A6LA39_PARD8

Protein

Xylose isomerase

Gene

xylA

Organism
Parabacteroides distasonis (strain ATCC 8503 / DSM 20701 / NCTC 11152)
Status
Unreviewed - Annotation score: 2 out of 5- Protein inferred from homologyi
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    • History
      Entry version 56 (01 Oct 2014)
      Sequence version 1 (24 Jul 2007)
      Previous versions | rss
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    Functioni

    Catalytic activityi

    D-xylopyranose = D-xylulose.UniRule annotationSAAS annotation

    Cofactori

    Binds 2 magnesium ions per subunit.UniRule annotation

    Sites

    Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
    Active sitei107 – 1071UniRule annotation
    Active sitei110 – 1101UniRule annotation
    Metal bindingi238 – 2381Magnesium 1UniRule annotation
    Metal bindingi274 – 2741Magnesium 1UniRule annotation
    Metal bindingi274 – 2741Magnesium 2UniRule annotation
    Metal bindingi277 – 2771Magnesium 2UniRule annotation
    Metal bindingi302 – 3021Magnesium 1UniRule annotation
    Metal bindingi313 – 3131Magnesium 2UniRule annotation
    Metal bindingi315 – 3151Magnesium 2UniRule annotation
    Metal bindingi345 – 3451Magnesium 1UniRule annotation

    GO - Molecular functioni

    1. magnesium ion binding Source: UniProtKB-HAMAP
    2. xylose isomerase activity Source: UniProtKB-HAMAP

    GO - Biological processi

    1. D-xylose metabolic process Source: UniProtKB-HAMAP
    2. pentose-phosphate shunt Source: UniProtKB-HAMAP

    Keywords - Molecular functioni

    IsomeraseUniRule annotationSAAS annotationImported

    Keywords - Biological processi

    Carbohydrate metabolism, Pentose shuntUniRule annotationSAAS annotation, Xylose metabolismUniRule annotationSAAS annotation

    Keywords - Ligandi

    MagnesiumUniRule annotationSAAS annotation, Metal-bindingUniRule annotationSAAS annotation

    Enzyme and pathway databases

    BioCyciPDIS435591:GCNH-782-MONOMER.

    Names & Taxonomyi

    Protein namesi
    Recommended name:
    Xylose isomeraseUniRule annotation (EC:5.3.1.5UniRule annotation)
    Gene namesi
    Name:xylAUniRule annotation
    Ordered Locus Names:BDI_0783Imported
    OrganismiParabacteroides distasonis (strain ATCC 8503 / DSM 20701 / NCTC 11152)Imported
    Taxonomic identifieri435591 [NCBI]
    Taxonomic lineageiBacteriaBacteroidetesBacteroidiaBacteroidalesPorphyromonadaceaeParabacteroides
    ProteomesiUP000000566: Chromosome

    Subcellular locationi

    Cytoplasm UniRule annotationSAAS annotation

    GO - Cellular componenti

    1. cytoplasm Source: UniProtKB-SubCell

    Keywords - Cellular componenti

    CytoplasmUniRule annotationSAAS annotation

    Interactioni

    Subunit structurei

    Homotetramer.UniRule annotationSAAS annotation

    Protein-protein interaction databases

    STRINGi435591.BDI_0783.

    Structurei

    3D structure databases

    ProteinModelPortaliA6LA39.
    SMRiA6LA39. Positions 8-442.
    ModBaseiSearch...
    MobiDBiSearch...

    Family & Domainsi

    Sequence similaritiesi

    Belongs to the xylose isomerase family.UniRule annotation

    Phylogenomic databases

    eggNOGiCOG2115.
    HOGENOMiHOG000252293.
    KOiK01805.
    OMAiLFHAHIG.
    OrthoDBiEOG62NX4R.

    Family and domain databases

    Gene3Di3.20.20.150. 1 hit.
    HAMAPiMF_00455. Xylose_isom_A.
    InterProiIPR013022. Xyl_isomerase-like_TIM-brl.
    IPR013452. Xylose_isom_bac.
    IPR001998. Xylose_isomerase.
    [Graphical view]
    PfamiPF01261. AP_endonuc_2. 1 hit.
    [Graphical view]
    PRINTSiPR00688. XYLOSISMRASE.
    SUPFAMiSSF51658. SSF51658. 1 hit.
    TIGRFAMsiTIGR02630. xylose_isom_A. 1 hit.
    PROSITEiPS51415. XYLOSE_ISOMERASE. 1 hit.
    [Graphical view]

    Sequencei

    Sequence statusi: Complete.

    A6LA39-1 [UniParc]FASTAAdd to Basket

    « Hide

    MSYFKGEKEF FPGIGQIQFE GRESKNPLAF HYYDADKVVM GKTLKDHLRF    50
    AMAYWHTLCA EGGDQFGGGT KTFPWNDSTD AITRAKYKMD AAFEFMTKCN 100
    IPYYCFHDVD VVDEAPTLGE FEKRLQTMVE HAKEHQAATG KKLLWSTANV 150
    FGHKRYMNGA ATNPYFPTVA CVGTQIKNAI DACIALGGEN YVFWGGREGY 200
    MSLLNTNMKR EKDHLAMMLT MARDYGRKNG FKGTFLIEPK PMEPTKHQYD 250
    VDSETVIGFL RHYGLDKDFA LNIEVNHATL AGHTFEHELQ AAADAGMLCS 300
    IDANRGDYQN GWDTDQFPMD IYELAQAWLV ILEGGGLTTG GTNFDAKTRR 350
    NSTDLEDIFI AHIGGMDAFA RALMIAADIL ENSDYRKMRA ERYASFDAGE 400
    GKAFEDGKLT LEDLRTIALR DGEPKQISGK QELYEMIVNL HI 442
    Length:442
    Mass (Da):49,782
    Last modified:July 24, 2007 - v1
    Checksum:i840F96B5BA5B23B7
    GO

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    CP000140 Genomic DNA. Translation: ABR42553.1.
    RefSeqiYP_001302175.1. NC_009615.1.

    Genome annotation databases

    EnsemblBacteriaiABR42553; ABR42553; BDI_0783.
    GeneIDi5305937.
    KEGGipdi:BDI_0783.
    PATRICi22844706. VBIParDis29947_0762.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    CP000140 Genomic DNA. Translation: ABR42553.1 .
    RefSeqi YP_001302175.1. NC_009615.1.

    3D structure databases

    ProteinModelPortali A6LA39.
    SMRi A6LA39. Positions 8-442.
    ModBasei Search...
    MobiDBi Search...

    Protein-protein interaction databases

    STRINGi 435591.BDI_0783.

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Genome annotation databases

    EnsemblBacteriai ABR42553 ; ABR42553 ; BDI_0783 .
    GeneIDi 5305937.
    KEGGi pdi:BDI_0783.
    PATRICi 22844706. VBIParDis29947_0762.

    Phylogenomic databases

    eggNOGi COG2115.
    HOGENOMi HOG000252293.
    KOi K01805.
    OMAi LFHAHIG.
    OrthoDBi EOG62NX4R.

    Enzyme and pathway databases

    BioCyci PDIS435591:GCNH-782-MONOMER.

    Family and domain databases

    Gene3Di 3.20.20.150. 1 hit.
    HAMAPi MF_00455. Xylose_isom_A.
    InterProi IPR013022. Xyl_isomerase-like_TIM-brl.
    IPR013452. Xylose_isom_bac.
    IPR001998. Xylose_isomerase.
    [Graphical view ]
    Pfami PF01261. AP_endonuc_2. 1 hit.
    [Graphical view ]
    PRINTSi PR00688. XYLOSISMRASE.
    SUPFAMi SSF51658. SSF51658. 1 hit.
    TIGRFAMsi TIGR02630. xylose_isom_A. 1 hit.
    PROSITEi PS51415. XYLOSE_ISOMERASE. 1 hit.
    [Graphical view ]
    ProtoNeti Search...

    Publicationsi

    1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
      Strain: ATCC 8503 / DSM 20701 / NCTC 11152Imported.

    Entry informationi

    Entry nameiA6LA39_PARD8
    AccessioniPrimary (citable) accession number: A6LA39
    Entry historyi
    Integrated into UniProtKB/TrEMBL: July 24, 2007
    Last sequence update: July 24, 2007
    Last modified: October 1, 2014
    This is version 56 of the entry and version 1 of the sequence. [Complete history]
    Entry statusiUnreviewed (UniProtKB/TrEMBL)

    Miscellaneousi

    Keywords - Technical termi

    Complete proteome, Reference proteomeImported

    External Data

    Dasty 3