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A6LA39 (A6LA39_PARD8) Unreviewed, UniProtKB/TrEMBL

Last modified June 11, 2014. Version 55. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Protein attributes

Sequence length442 AA.
Sequence statusComplete.
Protein existenceInferred from homology

General annotation (Comments)

Catalytic activity

D-xylopyranose = D-xylulose. HAMAP-Rule MF_00455 RuleBase RU000609 SAAS SAAS001998

Cofactor

Binds 2 magnesium ions per subunit By similarity. HAMAP-Rule MF_00455

Subunit structure

Homotetramer By similarity. HAMAP-Rule MF_00455 RuleBase RU000610 SAAS SAAS001998

Subcellular location

Cytoplasm By similarity HAMAP-Rule MF_00455 RuleBase RU000610 SAAS SAAS001998.

Sequence similarities

Belongs to the xylose isomerase family. HAMAP-Rule MF_00455 RuleBase RU000609

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Sites

Active site1071 By similarity HAMAP-Rule MF_00455
Active site1101 By similarity HAMAP-Rule MF_00455
Metal binding2381Magnesium 1 By similarity HAMAP-Rule MF_00455
Metal binding2741Magnesium 1 By similarity HAMAP-Rule MF_00455
Metal binding2741Magnesium 2 By similarity HAMAP-Rule MF_00455
Metal binding2771Magnesium 2 By similarity HAMAP-Rule MF_00455
Metal binding3021Magnesium 1 By similarity HAMAP-Rule MF_00455
Metal binding3131Magnesium 2 By similarity HAMAP-Rule MF_00455
Metal binding3151Magnesium 2 By similarity HAMAP-Rule MF_00455
Metal binding3451Magnesium 1 By similarity HAMAP-Rule MF_00455

Sequences

Sequence LengthMass (Da)Tools
A6LA39 [UniParc].

Last modified July 24, 2007. Version 1.
Checksum: 840F96B5BA5B23B7

FASTA44249,782
        10         20         30         40         50         60 
MSYFKGEKEF FPGIGQIQFE GRESKNPLAF HYYDADKVVM GKTLKDHLRF AMAYWHTLCA 

        70         80         90        100        110        120 
EGGDQFGGGT KTFPWNDSTD AITRAKYKMD AAFEFMTKCN IPYYCFHDVD VVDEAPTLGE 

       130        140        150        160        170        180 
FEKRLQTMVE HAKEHQAATG KKLLWSTANV FGHKRYMNGA ATNPYFPTVA CVGTQIKNAI 

       190        200        210        220        230        240 
DACIALGGEN YVFWGGREGY MSLLNTNMKR EKDHLAMMLT MARDYGRKNG FKGTFLIEPK 

       250        260        270        280        290        300 
PMEPTKHQYD VDSETVIGFL RHYGLDKDFA LNIEVNHATL AGHTFEHELQ AAADAGMLCS 

       310        320        330        340        350        360 
IDANRGDYQN GWDTDQFPMD IYELAQAWLV ILEGGGLTTG GTNFDAKTRR NSTDLEDIFI 

       370        380        390        400        410        420 
AHIGGMDAFA RALMIAADIL ENSDYRKMRA ERYASFDAGE GKAFEDGKLT LEDLRTIALR 

       430        440 
DGEPKQISGK QELYEMIVNL HI 

« Hide

References

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
CP000140 Genomic DNA. Translation: ABR42553.1.
RefSeqYP_001302175.1. NC_009615.1.

3D structure databases

ProteinModelPortalA6LA39.
SMRA6LA39. Positions 8-442.
ModBaseSearch...
MobiDBSearch...

Protein-protein interaction databases

STRING435591.BDI_0783.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaABR42553; ABR42553; BDI_0783.
GeneID5305937.
KEGGpdi:BDI_0783.
PATRIC22844706. VBIParDis29947_0762.

Organism-specific databases

CMRSearch...

Phylogenomic databases

eggNOGCOG2115.
HOGENOMHOG000252293.
KOK01805.
OMALFHAHIG.
OrthoDBEOG62NX4R.

Enzyme and pathway databases

BioCycPDIS435591:GCNH-782-MONOMER.

Family and domain databases

Gene3D3.20.20.150. 1 hit.
HAMAPMF_00455. Xylose_isom_A.
InterProIPR013022. Xyl_isomerase-like_TIM-brl.
IPR013452. Xylose_isom_bac.
IPR001998. Xylose_isomerase.
[Graphical view]
PfamPF01261. AP_endonuc_2. 1 hit.
[Graphical view]
PRINTSPR00688. XYLOSISMRASE.
SUPFAMSSF51658. SSF51658. 1 hit.
TIGRFAMsTIGR02630. xylose_isom_A. 1 hit.
PROSITEPS51415. XYLOSE_ISOMERASE. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameA6LA39_PARD8
AccessionPrimary (citable) accession number: A6LA39
Entry history
Integrated into UniProtKB/TrEMBL: July 24, 2007
Last sequence update: July 24, 2007
Last modified: June 11, 2014
This is version 55 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)