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A6LA39

- A6LA39_PARD8

UniProt

A6LA39 - A6LA39_PARD8

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Protein
Xylose isomerase
Gene
xylA, BDI_0783
Organism
Parabacteroides distasonis (strain ATCC 8503 / DSM 20701 / NCTC 11152)
Status
Unreviewed - Annotation score: 2 out of 5 - Protein inferred from homologyi

Functioni

Catalytic activityi

D-xylopyranose = D-xylulose.UniRule annotationSAAS annotations

Cofactori

Binds 2 magnesium ions per subunit By similarity.UniRule annotation

Sites

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Active sitei107 – 1071 By similarityUniRule annotation
Active sitei110 – 1101 By similarityUniRule annotation
Metal bindingi238 – 2381Magnesium 1 By similarityUniRule annotation
Metal bindingi274 – 2741Magnesium 1 By similarityUniRule annotation
Metal bindingi274 – 2741Magnesium 2 By similarityUniRule annotation
Metal bindingi277 – 2771Magnesium 2 By similarityUniRule annotation
Metal bindingi302 – 3021Magnesium 1 By similarityUniRule annotation
Metal bindingi313 – 3131Magnesium 2 By similarityUniRule annotation
Metal bindingi315 – 3151Magnesium 2 By similarityUniRule annotation
Metal bindingi345 – 3451Magnesium 1 By similarityUniRule annotation

GO - Molecular functioni

  1. magnesium ion binding Source: UniProtKB-HAMAP
  2. xylose isomerase activity Source: UniProtKB-HAMAP
Complete GO annotation...

GO - Biological processi

  1. D-xylose metabolic process Source: UniProtKB-HAMAP
  2. pentose-phosphate shunt Source: UniProtKB-HAMAP
Complete GO annotation...

Keywords - Molecular functioni

IsomeraseUniRule annotationSAAS annotationsImported

Keywords - Biological processi

Carbohydrate metabolism, Pentose shuntUniRule annotationSAAS annotations, Xylose metabolismUniRule annotationSAAS annotations

Keywords - Ligandi

MagnesiumUniRule annotationSAAS annotations, Metal-bindingUniRule annotationSAAS annotations

Enzyme and pathway databases

BioCyciPDIS435591:GCNH-782-MONOMER.

Names & Taxonomyi

Protein namesi
Recommended name:
Xylose isomeraseUniRule annotation (EC:5.3.1.5UniRule annotation)
Gene namesi
Name:xylAUniRule annotation
Ordered Locus Names:BDI_0783Imported
OrganismiParabacteroides distasonis (strain ATCC 8503 / DSM 20701 / NCTC 11152)Imported
Taxonomic identifieri435591 [NCBI]
Taxonomic lineageiBacteriaBacteroidetesBacteroidiaBacteroidalesPorphyromonadaceaeParabacteroides
ProteomesiUP000000566: Chromosome

Subcellular locationi

Cytoplasm By similarity UniRule annotationSAAS annotations

GO - Cellular componenti

  1. cytoplasm Source: UniProtKB-SubCell
Complete GO annotation...

Keywords - Cellular componenti

CytoplasmUniRule annotationSAAS annotations

Interactioni

Subunit structurei

Homotetramer By similarity.UniRule annotationSAAS annotations

Protein-protein interaction databases

STRINGi435591.BDI_0783.

Structurei

3D structure databases

ProteinModelPortaliA6LA39.
SMRiA6LA39. Positions 8-442.

Family & Domainsi

Sequence similaritiesi

Phylogenomic databases

eggNOGiCOG2115.
HOGENOMiHOG000252293.
KOiK01805.
OMAiLFHAHIG.
OrthoDBiEOG62NX4R.

Family and domain databases

Gene3Di3.20.20.150. 1 hit.
HAMAPiMF_00455. Xylose_isom_A.
InterProiIPR013022. Xyl_isomerase-like_TIM-brl.
IPR013452. Xylose_isom_bac.
IPR001998. Xylose_isomerase.
[Graphical view]
PfamiPF01261. AP_endonuc_2. 1 hit.
[Graphical view]
PRINTSiPR00688. XYLOSISMRASE.
SUPFAMiSSF51658. SSF51658. 1 hit.
TIGRFAMsiTIGR02630. xylose_isom_A. 1 hit.
PROSITEiPS51415. XYLOSE_ISOMERASE. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

A6LA39-1 [UniParc]FASTAAdd to Basket

« Hide

MSYFKGEKEF FPGIGQIQFE GRESKNPLAF HYYDADKVVM GKTLKDHLRF    50
AMAYWHTLCA EGGDQFGGGT KTFPWNDSTD AITRAKYKMD AAFEFMTKCN 100
IPYYCFHDVD VVDEAPTLGE FEKRLQTMVE HAKEHQAATG KKLLWSTANV 150
FGHKRYMNGA ATNPYFPTVA CVGTQIKNAI DACIALGGEN YVFWGGREGY 200
MSLLNTNMKR EKDHLAMMLT MARDYGRKNG FKGTFLIEPK PMEPTKHQYD 250
VDSETVIGFL RHYGLDKDFA LNIEVNHATL AGHTFEHELQ AAADAGMLCS 300
IDANRGDYQN GWDTDQFPMD IYELAQAWLV ILEGGGLTTG GTNFDAKTRR 350
NSTDLEDIFI AHIGGMDAFA RALMIAADIL ENSDYRKMRA ERYASFDAGE 400
GKAFEDGKLT LEDLRTIALR DGEPKQISGK QELYEMIVNL HI 442
Length:442
Mass (Da):49,782
Last modified:July 24, 2007 - v1
Checksum:i840F96B5BA5B23B7
GO

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
CP000140 Genomic DNA. Translation: ABR42553.1.
RefSeqiYP_001302175.1. NC_009615.1.

Genome annotation databases

EnsemblBacteriaiABR42553; ABR42553; BDI_0783.
GeneIDi5305937.
KEGGipdi:BDI_0783.
PATRICi22844706. VBIParDis29947_0762.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
CP000140 Genomic DNA. Translation: ABR42553.1 .
RefSeqi YP_001302175.1. NC_009615.1.

3D structure databases

ProteinModelPortali A6LA39.
SMRi A6LA39. Positions 8-442.
ModBasei Search...

Protein-protein interaction databases

STRINGi 435591.BDI_0783.

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

EnsemblBacteriai ABR42553 ; ABR42553 ; BDI_0783 .
GeneIDi 5305937.
KEGGi pdi:BDI_0783.
PATRICi 22844706. VBIParDis29947_0762.

Phylogenomic databases

eggNOGi COG2115.
HOGENOMi HOG000252293.
KOi K01805.
OMAi LFHAHIG.
OrthoDBi EOG62NX4R.

Enzyme and pathway databases

BioCyci PDIS435591:GCNH-782-MONOMER.

Family and domain databases

Gene3Di 3.20.20.150. 1 hit.
HAMAPi MF_00455. Xylose_isom_A.
InterProi IPR013022. Xyl_isomerase-like_TIM-brl.
IPR013452. Xylose_isom_bac.
IPR001998. Xylose_isomerase.
[Graphical view ]
Pfami PF01261. AP_endonuc_2. 1 hit.
[Graphical view ]
PRINTSi PR00688. XYLOSISMRASE.
SUPFAMi SSF51658. SSF51658. 1 hit.
TIGRFAMsi TIGR02630. xylose_isom_A. 1 hit.
PROSITEi PS51415. XYLOSE_ISOMERASE. 1 hit.
[Graphical view ]
ProtoNeti Search...

Publicationsi

  1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: ATCC 8503 / DSM 20701 / NCTC 11152.

Entry informationi

Entry nameiA6LA39_PARD8
AccessioniPrimary (citable) accession number: A6LA39
Entry historyi
Integrated into UniProtKB/TrEMBL: July 24, 2007
Last sequence update: July 24, 2007
Last modified: June 11, 2014
This is version 55 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome

External Data

Dasty 3

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