Skip Header

You are using a version of browser that may not display all the features of this website. Please consider upgrading your browser.

A6L792

- XYLA_BACV8

UniProt

A6L792 - XYLA_BACV8

(max 400 entries)x

Your basket is currently empty.

Select item(s) and click on "Add to basket" to create your own collection here
(400 entries max)

Protein

Xylose isomerase

Gene

xylA

Organism
Bacteroides vulgatus (strain ATCC 8482 / DSM 1447 / NCTC 11154)
Status
Reviewed - Annotation score: 3 out of 5- Protein inferred from homologyi

Functioni

Catalytic activityi

D-xylopyranose = D-xylulose.UniRule annotation

Cofactori

Mg2+UniRule annotationNote: Binds 2 magnesium ions per subunit.UniRule annotation

Sites

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Active sitei103 – 1031UniRule annotation
Active sitei106 – 1061UniRule annotation
Metal bindingi234 – 2341Magnesium 1UniRule annotation
Metal bindingi270 – 2701Magnesium 1UniRule annotation
Metal bindingi270 – 2701Magnesium 2UniRule annotation
Metal bindingi273 – 2731Magnesium 2UniRule annotation
Metal bindingi298 – 2981Magnesium 1UniRule annotation
Metal bindingi309 – 3091Magnesium 2UniRule annotation
Metal bindingi311 – 3111Magnesium 2UniRule annotation
Metal bindingi341 – 3411Magnesium 1UniRule annotation

GO - Molecular functioni

  1. magnesium ion binding Source: UniProtKB-HAMAP
  2. xylose isomerase activity Source: UniProtKB-HAMAP

GO - Biological processi

  1. D-xylose metabolic process Source: UniProtKB-HAMAP
  2. pentose-phosphate shunt Source: UniProtKB-HAMAP
Complete GO annotation...

Keywords - Molecular functioni

Isomerase

Keywords - Biological processi

Carbohydrate metabolism, Pentose shunt, Xylose metabolism

Keywords - Ligandi

Magnesium, Metal-binding

Enzyme and pathway databases

BioCyciBVUL435590:GH96-3943-MONOMER.

Names & Taxonomyi

Protein namesi
Recommended name:
Xylose isomeraseUniRule annotation (EC:5.3.1.5UniRule annotation)
Gene namesi
Name:xylAUniRule annotation
Ordered Locus Names:BVU_3953
OrganismiBacteroides vulgatus (strain ATCC 8482 / DSM 1447 / NCTC 11154)
Taxonomic identifieri435590 [NCBI]
Taxonomic lineageiBacteriaBacteroidetesBacteroidiaBacteroidalesBacteroidaceaeBacteroides
ProteomesiUP000002861: Chromosome

Subcellular locationi

Cytoplasm UniRule annotation

GO - Cellular componenti

  1. cytoplasm Source: UniProtKB-HAMAP
Complete GO annotation...

Keywords - Cellular componenti

Cytoplasm

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Chaini1 – 438438Xylose isomerasePRO_1000026430Add
BLAST

Interactioni

Subunit structurei

Homotetramer.UniRule annotation

Protein-protein interaction databases

STRINGi435590.BVU_3953.

Structurei

3D structure databases

ProteinModelPortaliA6L792.
SMRiA6L792. Positions 4-438.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Sequence similaritiesi

Belongs to the xylose isomerase family.UniRule annotation

Phylogenomic databases

eggNOGiCOG2115.
HOGENOMiHOG000252293.
KOiK01805.
OMAiLFHAHIG.
OrthoDBiEOG62NX4R.

Family and domain databases

Gene3Di3.20.20.150. 1 hit.
HAMAPiMF_00455. Xylose_isom_A.
InterProiIPR013022. Xyl_isomerase-like_TIM-brl.
IPR013452. Xylose_isom_bac.
IPR001998. Xylose_isomerase.
[Graphical view]
PfamiPF01261. AP_endonuc_2. 1 hit.
[Graphical view]
PRINTSiPR00688. XYLOSISMRASE.
SUPFAMiSSF51658. SSF51658. 1 hit.
TIGRFAMsiTIGR02630. xylose_isom_A. 1 hit.
PROSITEiPS51415. XYLOSE_ISOMERASE. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

A6L792-1 [UniParc]FASTAAdd to Basket

« Hide

        10         20         30         40         50
MATKEYFPGI GKIKFEGKES KNPMAFRYYD AEKVINGKKM KDWLKFAMAW
60 70 80 90 100
WHTLCAEGGD QFGGGTKKFP WNGDADKVQA AKNKMDAGFE FMQKMGIEYY
110 120 130 140 150
CFHDVDLCEE ADTIEEYEAN LKEIVAYAKQ KQAETGIKLL WGTANVFGHA
160 170 180 190 200
RYMNGAATNP EFDVVARAAV QIKNAIDATI ELGGSNYVFW GGREGYMSLL
210 220 230 240 250
NTDQKREKEH LAQMLTIARD YARSKGFTGT FLIEPKPMEP TKHQYDVDTE
260 270 280 290 300
TVVGFLKTHG LDKDFKVNIE VNHATLAGHT FEHELAVAVD NGMLGSIDAN
310 320 330 340 350
RGDYQNGWDT DQFPIDNYEL TQAMMQIIRN GGLGNGGTNF DAKTRRNSTD
360 370 380 390 400
LEDIFIAHIA GMDAMARALE SAAALLNESP YCKMLSDRYA SFDSGKGKEF
410 420 430
EEGKLTLEDV VAYAKQNGEP KQVSGKQELY EAIVNMYC
Length:438
Mass (Da):49,036
Last modified:July 24, 2007 - v1
Checksum:iF1AC973EF3A2F230
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP000139 Genomic DNA. Translation: ABR41556.1.
RefSeqiYP_001301178.1. NC_009614.1.

Genome annotation databases

EnsemblBacteriaiABR41556; ABR41556; BVU_3953.
GeneIDi5304912.
KEGGibvu:BVU_3953.
PATRICi21073000. VBIBacVul85104_4062.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP000139 Genomic DNA. Translation: ABR41556.1 .
RefSeqi YP_001301178.1. NC_009614.1.

3D structure databases

ProteinModelPortali A6L792.
SMRi A6L792. Positions 4-438.
ModBasei Search...
MobiDBi Search...

Protein-protein interaction databases

STRINGi 435590.BVU_3953.

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

EnsemblBacteriai ABR41556 ; ABR41556 ; BVU_3953 .
GeneIDi 5304912.
KEGGi bvu:BVU_3953.
PATRICi 21073000. VBIBacVul85104_4062.

Phylogenomic databases

eggNOGi COG2115.
HOGENOMi HOG000252293.
KOi K01805.
OMAi LFHAHIG.
OrthoDBi EOG62NX4R.

Enzyme and pathway databases

BioCyci BVUL435590:GH96-3943-MONOMER.

Family and domain databases

Gene3Di 3.20.20.150. 1 hit.
HAMAPi MF_00455. Xylose_isom_A.
InterProi IPR013022. Xyl_isomerase-like_TIM-brl.
IPR013452. Xylose_isom_bac.
IPR001998. Xylose_isomerase.
[Graphical view ]
Pfami PF01261. AP_endonuc_2. 1 hit.
[Graphical view ]
PRINTSi PR00688. XYLOSISMRASE.
SUPFAMi SSF51658. SSF51658. 1 hit.
TIGRFAMsi TIGR02630. xylose_isom_A. 1 hit.
PROSITEi PS51415. XYLOSE_ISOMERASE. 1 hit.
[Graphical view ]
ProtoNeti Search...

Publicationsi

  1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: ATCC 8482 / DSM 1447 / NCTC 11154.

Entry informationi

Entry nameiXYLA_BACV8
AccessioniPrimary (citable) accession number: A6L792
Entry historyi
Integrated into UniProtKB/Swiss-Prot: January 15, 2008
Last sequence update: July 24, 2007
Last modified: November 26, 2014
This is version 50 of the entry and version 1 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. SIMILARITY comments
    Index of protein domains and families

External Data

Dasty 3