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A6L792 (XYLA_BACV8) Reviewed, UniProtKB/Swiss-Prot

Last modified May 14, 2014. Version 47. Feed History...

Clusters with 100%, 90%, 50% identity | Documents (1) | Third-party data text xml rdf/xml gff fasta
to top of pageNames·Attributes·General annotation·Ontologies·Sequence annotation·Sequences·References·Cross-refs·Entry info·DocumentsCustomize order

Names and origin

Protein namesRecommended name:
Xylose isomerase

EC=5.3.1.5
Gene names
Name:xylA
Ordered Locus Names:BVU_3953
OrganismBacteroides vulgatus (strain ATCC 8482 / DSM 1447 / NCTC 11154) [Complete proteome] [HAMAP]
Taxonomic identifier435590 [NCBI]
Taxonomic lineageBacteriaBacteroidetesBacteroidiaBacteroidalesBacteroidaceaeBacteroides

Protein attributes

Sequence length438 AA.
Sequence statusComplete.
Protein existenceInferred from homology

General annotation (Comments)

Catalytic activity

D-xylopyranose = D-xylulose. HAMAP-Rule MF_00455

Cofactor

Binds 2 magnesium ions per subunit By similarity. HAMAP-Rule MF_00455

Subunit structure

Homotetramer By similarity. HAMAP-Rule MF_00455

Subcellular location

Cytoplasm By similarity HAMAP-Rule MF_00455.

Sequence similarities

Belongs to the xylose isomerase family.

Ontologies

Keywords
   Biological processCarbohydrate metabolism
Pentose shunt
Xylose metabolism
   Cellular componentCytoplasm
   LigandMagnesium
Metal-binding
   Molecular functionIsomerase
   Technical termComplete proteome
Gene Ontology (GO)
   Biological_processD-xylose metabolic process

Inferred from electronic annotation. Source: UniProtKB-HAMAP

pentose-phosphate shunt

Inferred from electronic annotation. Source: UniProtKB-HAMAP

   Cellular_componentcytoplasm

Inferred from electronic annotation. Source: UniProtKB-SubCell

   Molecular_functionmagnesium ion binding

Inferred from electronic annotation. Source: UniProtKB-HAMAP

xylose isomerase activity

Inferred from electronic annotation. Source: UniProtKB-HAMAP

Complete GO annotation...

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Molecule processing

Chain1 – 438438Xylose isomerase HAMAP-Rule MF_00455
PRO_1000026430

Sites

Active site1031 By similarity
Active site1061 By similarity
Metal binding2341Magnesium 1 By similarity
Metal binding2701Magnesium 1 By similarity
Metal binding2701Magnesium 2 By similarity
Metal binding2731Magnesium 2 By similarity
Metal binding2981Magnesium 1 By similarity
Metal binding3091Magnesium 2 By similarity
Metal binding3111Magnesium 2 By similarity
Metal binding3411Magnesium 1 By similarity

Sequences

Sequence LengthMass (Da)Tools
A6L792 [UniParc].

Last modified July 24, 2007. Version 1.
Checksum: F1AC973EF3A2F230

FASTA43849,036
        10         20         30         40         50         60 
MATKEYFPGI GKIKFEGKES KNPMAFRYYD AEKVINGKKM KDWLKFAMAW WHTLCAEGGD 

        70         80         90        100        110        120 
QFGGGTKKFP WNGDADKVQA AKNKMDAGFE FMQKMGIEYY CFHDVDLCEE ADTIEEYEAN 

       130        140        150        160        170        180 
LKEIVAYAKQ KQAETGIKLL WGTANVFGHA RYMNGAATNP EFDVVARAAV QIKNAIDATI 

       190        200        210        220        230        240 
ELGGSNYVFW GGREGYMSLL NTDQKREKEH LAQMLTIARD YARSKGFTGT FLIEPKPMEP 

       250        260        270        280        290        300 
TKHQYDVDTE TVVGFLKTHG LDKDFKVNIE VNHATLAGHT FEHELAVAVD NGMLGSIDAN 

       310        320        330        340        350        360 
RGDYQNGWDT DQFPIDNYEL TQAMMQIIRN GGLGNGGTNF DAKTRRNSTD LEDIFIAHIA 

       370        380        390        400        410        420 
GMDAMARALE SAAALLNESP YCKMLSDRYA SFDSGKGKEF EEGKLTLEDV VAYAKQNGEP 

       430 
KQVSGKQELY EAIVNMYC 

« Hide

References

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
CP000139 Genomic DNA. Translation: ABR41556.1.
RefSeqYP_001301178.1. NC_009614.1.

3D structure databases

ProteinModelPortalA6L792.
SMRA6L792. Positions 4-438.
ModBaseSearch...
MobiDBSearch...

Protein-protein interaction databases

STRING435590.BVU_3953.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaABR41556; ABR41556; BVU_3953.
GeneID5304912.
KEGGbvu:BVU_3953.
PATRIC21073000. VBIBacVul85104_4062.

Organism-specific databases

CMRSearch...

Phylogenomic databases

eggNOGCOG2115.
HOGENOMHOG000252293.
KOK01805.
OMALFHAHIG.
OrthoDBEOG62NX4R.

Enzyme and pathway databases

BioCycBVUL435590:GH96-3943-MONOMER.

Family and domain databases

Gene3D3.20.20.150. 1 hit.
HAMAPMF_00455. Xylose_isom_A.
InterProIPR013022. Xyl_isomerase-like_TIM-brl.
IPR013452. Xylose_isom_bac.
IPR001998. Xylose_isomerase.
[Graphical view]
PfamPF01261. AP_endonuc_2. 1 hit.
[Graphical view]
PRINTSPR00688. XYLOSISMRASE.
SUPFAMSSF51658. SSF51658. 1 hit.
TIGRFAMsTIGR02630. xylose_isom_A. 1 hit.
PROSITEPS51415. XYLOSE_ISOMERASE. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameXYLA_BACV8
AccessionPrimary (citable) accession number: A6L792
Entry history
Integrated into UniProtKB/Swiss-Prot: January 15, 2008
Last sequence update: July 24, 2007
Last modified: May 14, 2014
This is version 47 of the entry and version 1 of the sequence. [Complete history]
Entry statusReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Relevant documents

SIMILARITY comments

Index of protein domains and families