false
2007-07-24
2024-03-27
103
A6L177_PHOV8
Evolution of symbiotic bacteria in the distal human intestine.
Xu J.
Mahowald M.A.
Ley R.E.
Lozupone C.A.
Hamady M.
Martens E.C.
Henrissat B.
Coutinho P.M.
Minx P.
Latreille P.
Cordum H.
Van Brunt A.
Kim K.
Fulton R.S.
Fulton L.A.
Clifton S.W.
Wilson R.K.
Knight R.D.
Gordon J.I.
doi:10.1371/journal.pbio.0050156
2007
PLoS Biol.
5
1574-1586
NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]
ATCC 8482 / DSM 1447 / JCM 5826 / CCUG 4940 / NBRC 14291 / NCTC 11154
Bacteria
Bacteria
PLPDE_III_AR
Alanine racemase
Mur ligase, C-terminal domain
Mur-like, catalytic domain
MurE/MurF, N-terminal domain
Ala_racemase
Ala_racemase
Ala_racemase/Decarboxylase_C
Ala_racemase_C
Ala_racemase_N
Mur-like_cat_sf
Mur_ligase_C_dom_sf
Mur_ligase_cen
MurE/MurF_N
PLP-binding_barrel
UDP-N-AcMur_synth
alr
murF
UDP-N-ACETYLMURAMOYL-TRIPEPTIDE--D-ALANYL-D-ALANINE LIGASE
UDP-N-ACETYLMURAMOYL-TRIPEPTIDE--D-ALANYL-D-ALANINE LIGASE
Ala_racemase_C
Ala_racemase_N
Mur_ligase_M
ALARACEMASE
Ala_racemase_C
Alanine racemase C-terminal domain-like
MurD-like peptide ligases, catalytic domain
MurD-like peptide ligases, peptide-binding domain
MurE/MurF N-terminal domain
PLP-binding barrel
Alanine racemase
5.1.1.1
BVU_1765
Catalyzes the interconversion of L-alanine and D-alanine. May also act on other amino acids.
Belongs to the alanine racemase family.
Alanine racemase C-terminal
695
819
Proton acceptor; specific for D-alanine
492
Proton acceptor; specific for L-alanine
716
590
765
N6-(pyridoxal phosphate)lysine
substrate
2007-07-24
1
92753
0a72bf3c93789712c3aa4392aa474e03
MSSSIENIEKVLGAKRFGDRSAQIDWILTDSRSLCFPEETLFFALKTKRNDGHKYLPELYERGVRNFVVGELPADMKSFQDANFLQLANPLKGLQKLAEKHREQFQIPVIGITGSNGKTIVKEWLYQLLSPDRVVTRSPRSYNSQIGVPLSVWLMNERTELAIFEAGISEMGEMEALQTIIKPTVGILTNIGGAHQENFFSLQDKCMEKLTLFKDCDVIIYDGDNELISSCVAKSLFTSREIAWSKKDNERPLFIESIQKGAHATTIKYRYLGMPNEFSIPFIDDASIENSLHCLAVALYMMVSPEQITERMARLEQIAMRLEVKEGKNGCVLINDSYNSDLASLDIALDFMSRRSDDKGKKRTLILSDMLETGQSGKLLYRQVAELVHSRGVEKIIGVGEEIRTAAARFEIEKYFFRTTEELLESDLLAGLRNEVILVKGSRAFHFDRISDRLELKVHETILEINLNALVDNLNYYRSKLKPETKMVCMVKASAYGAGSYEIAKTLQDHRVDYLAVAVADEGSDLRKAGITCSIMIMNPELTAFKTMFDYKLEPEVYSFHLLNELIKAAEKEGVTNFPIHIKLDTGMHRLGFAPEEIPELIDRLKKQTAVIPRSVFSHLVGSDGAQFDSFTRRQIEMFEAASECLQEAFQHKILRHICNTAGIERYPGAQFDMVRLGIGLYGIDPFTNQIIHNVSTLKTTILQIHEVPKEETVGYSRKGHLERDSRIAAIPIGYADGLNRRLGNGHAYCLVNGQKAPYVGNICMDVCMIDVTDIDCKEGDKTIIFGDDLPVTVLSEILETIPYEILTSVSNRVKRVYYQN