A6L177 (A6L177_BACV8) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
Putative alanine racemase and UDP-N-acetylmuramoylalanyl-D-glutamyl, 6-diaminopimelate-D-alanyl-D-alanyl ligase fusion protein EMBL ABR39441.1

Gene names

Ordered Locus Names:

BVU_1765

Organism

Bacteroides vulgatus (strain ATCC 8482 / DSM 1447 / NCTC 11154) [Complete proteome] [HAMAP] EMBL ABR39441.1

Taxonomic identifier

435590 [NCBI]

Taxonomic lineage

cellular organisms › Bacteria › Bacteroidetes/Chlorobi group › Bacteroidetes › Bacteroidia › Bacteroidales › Bacteroidaceae › Bacteroides › Bacteroides vulgatus

Protein attributes

Sequence length	821 AA.
Sequence status	Complete.
Protein existence	Inferred from homology

General annotation (Comments)

Cofactor

Pyridoxal phosphate By similarity. SAAS SAAS011079

Ontologies

Keywords
Ligand	Pyridoxal phosphate SAAS SAAS011079
Molecular function	Isomerase SAAS SAAS011079 Ligase EMBL ABR39441.1
Technical term	Complete proteome
Gene Ontology (GO)
Biological_process	alanine metabolic process Inferred from electronic annotation. Source: InterPro biosynthetic process Inferred from electronic annotation. Source: InterPro cell division Inferred from electronic annotation. Source: InterPro regulation of cell shape Inferred from electronic annotation. Source: InterPro
Cellular_component	cytoplasm Inferred from electronic annotation. Source: InterPro
Molecular_function	ATP binding Inferred from electronic annotation. Source: InterPro UDP-N-acetylmuramoylalanyl-D-glutamyl-2,6-diaminopimelate-D-alanyl-D-alanine ligase activity Inferred from electronic annotation. Source: InterPro alanine racemase activity Inferred from electronic annotation. Source: InterPro
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	A6L177 [UniParc]. Last modified July 24, 2007. Version 1. Checksum: F2BE49A59D2DFA93	FASTA	821	92,753
	10 20 30 40 50 60 MSSSIENIEK VLGAKRFGDR SAQIDWILTD SRSLCFPEET LFFALKTKRN DGHKYLPELY 70 80 90 100 110 120 ERGVRNFVVG ELPADMKSFQ DANFLQLANP LKGLQKLAEK HREQFQIPVI GITGSNGKTI 130 140 150 160 170 180 VKEWLYQLLS PDRVVTRSPR SYNSQIGVPL SVWLMNERTE LAIFEAGISE MGEMEALQTI 190 200 210 220 230 240 IKPTVGILTN IGGAHQENFF SLQDKCMEKL TLFKDCDVII YDGDNELISS CVAKSLFTSR 250 260 270 280 290 300 EIAWSKKDNE RPLFIESIQK GAHATTIKYR YLGMPNEFSI PFIDDASIEN SLHCLAVALY 310 320 330 340 350 360 MMVSPEQITE RMARLEQIAM RLEVKEGKNG CVLINDSYNS DLASLDIALD FMSRRSDDKG 370 380 390 400 410 420 KKRTLILSDM LETGQSGKLL YRQVAELVHS RGVEKIIGVG EEIRTAAARF EIEKYFFRTT 430 440 450 460 470 480 EELLESDLLA GLRNEVILVK GSRAFHFDRI SDRLELKVHE TILEINLNAL VDNLNYYRSK 490 500 510 520 530 540 LKPETKMVCM VKASAYGAGS YEIAKTLQDH RVDYLAVAVA DEGSDLRKAG ITCSIMIMNP 550 560 570 580 590 600 ELTAFKTMFD YKLEPEVYSF HLLNELIKAA EKEGVTNFPI HIKLDTGMHR LGFAPEEIPE 610 620 630 640 650 660 LIDRLKKQTA VIPRSVFSHL VGSDGAQFDS FTRRQIEMFE AASECLQEAF QHKILRHICN 670 680 690 700 710 720 TAGIERYPGA QFDMVRLGIG LYGIDPFTNQ IIHNVSTLKT TILQIHEVPK EETVGYSRKG 730 740 750 760 770 780 HLERDSRIAA IPIGYADGLN RRLGNGHAYC LVNGQKAPYV GNICMDVCMI DVTDIDCKEG 790 800 810 820 DKTIIFGDDL PVTVLSEILE TIPYEILTSV SNRVKRVYYQ N

References

[1]

"Evolution of symbiotic bacteria in the distal human intestine." Xu J., Mahowald M.A., Ley R.E., Lozupone C.A., Hamady M., Martens E.C., Henrissat B., Coutinho P.M., Minx P., Latreille P., Cordum H., Van Brunt A., Kim K., Fulton R.S., Fulton L.A., Clifton S.W., Wilson R.K., Knight R.D., Gordon J.I. PLoS Biol. 5:1574-1586(2007) [PubMed] [Europe PMC] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: ATCC 8482 / DSM 1447 / NCTC 11154.

Cross-references

Sequence databases
EMBL GenBank DDBJ	CP000139 Genomic DNA. Translation: ABR39441.1.
RefSeq	YP_001299063.1. NC_009614.1.
3D structure databases
ProteinModelPortal	A6L177.
ModBase	Search...
Protein-protein interaction databases
STRING	435590.BVU_1765.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
EnsemblBacteria	ABR39441; ABR39441; BVU_1765.
GeneID	5302731.
KEGG	bvu:BVU_1765.
PATRIC	21068424. VBIBacVul85104_1832.
Organism-specific databases
CMR	Search...
Phylogenomic databases
eggNOG	COG0770.
HOGENOM	HOG000274965.
KO	K01775.
OMA	SYNSQIG.
ProtClustDB	PRK11930.
Enzyme and pathway databases
BioCyc	BVUL435590:GH96-1821-MONOMER.
Family and domain databases
Gene3D	2.40.37.10. 1 hit. 3.40.1190.10. 1 hit. 3.90.190.20. 1 hit.
HAMAP	MF_01201. Ala_racemase.
InterPro	IPR000821. Ala_racemase. IPR009006. Ala_racemase/Decarboxylase_C. IPR011079. Ala_racemase_C. IPR001608. Ala_racemase_N. IPR004101. Mur_ligase_C. IPR013221. Mur_ligase_cen. IPR000713. Mur_ligase_N. IPR005863. UDP-N-AcMur-pentapeptide_synth. [Graphical view]
PANTHER	PTHR23135:SF3. PTHR23135:SF3. 1 hit.
Pfam	PF00842. Ala_racemase_C. 1 hit. PF01168. Ala_racemase_N. 1 hit. PF01225. Mur_ligase. 1 hit. PF08245. Mur_ligase_M. 1 hit. [Graphical view]
PRINTS	PR00992. ALARACEMASE.
SMART	SM01005. Ala_racemase_C. 1 hit. [Graphical view]
SUPFAM	SSF53244. Mur_ligase_C. 1 hit. SSF53623. Mur_ligase_cen. 1 hit. SSF50621. Racem_decarbox_C. 1 hit.
TIGRFAMs	TIGR00492. alr. 1 hit. TIGR01143. murF. 1 hit.
ProtoNet	Search...

Entry information

Entry name

A6L177_BACV8

Accession

Primary (citable) accession number: A6L177

Entry history

Integrated into UniProtKB/TrEMBL:	July 24, 2007
Last sequence update:	July 24, 2007
Last modified:	May 1, 2013
This is version 46 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)