A6H288 (A6H288_FLAPJ) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
Oxoglutarate dehydrogenase (Succinyl-transferring) EMBL CAL44462.1
EC=1.2.4.2 EMBL CAL44462.1

Gene names

Name:	sucA EMBL CAL44462.1
Ordered Locus Names:	FP2408

Organism

Flavobacterium psychrophilum (strain JIP02/86 / ATCC 49511)

Taxonomic identifier

402612 [NCBI]

Taxonomic lineage

Bacteria › Bacteroidetes › Flavobacteriia › Flavobacteriales › Flavobacteriaceae › Flavobacterium

Protein attributes

Sequence length	923 AA.
Sequence status	Complete.
Protein existence	Predicted

Ontologies

Keywords
Ligand	Thiamine pyrophosphate SAAS SAAS001017
Molecular function	Oxidoreductase EMBL CAL44462.1
Technical term	Complete proteome Reference proteome
Gene Ontology (GO)
Biological process	tricarboxylic acid cycle Inferred from electronic annotation. Source: InterPro
Molecular function	oxoglutarate dehydrogenase (succinyl-transferring) activity Inferred from electronic annotation. Source: EC thiamine pyrophosphate binding Inferred from electronic annotation. Source: InterPro
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	A6H288 [UniParc]. Last modified July 24, 2007. Version 1. Checksum: 44742ACF9BBF4D40	FASTA	923	105,184
	10 20 30 40 50 60 MDRFSFLNAA HTEFFAQLYD QYLENPDSIE PSWRSFFQGF DFGMTTYSEE NAANQMANIA 70 80 90 100 110 120 TTNVDNGQVS DKILKEFNVL KLIDGYRTRG HLFTQTNPVR ERRHYTPTLE LSDFGLTDSD 130 140 150 160 170 180 LNTVFDAAKI IGHQPSTLQE IIIHLKNVYC QHIGIEYMYM RNPEIIQWVQ NKINTNDNQP 190 200 210 220 230 240 NFDNNQKKII LEKLNEAVSF ENFLHTKYVG QKRFSLEGGE TIIAGLDALI EAAADKGVEK 250 260 270 280 290 300 FVMGMAHRGR LNVLANIFKK STQDIFSEFD GKDYDQEYFD GDVKYHLGLT SDRKTRSGKN 310 320 330 340 350 360 ININLAPNPS HLETVGAVIE GITRAKQDKY FPNDFSKVLP IAVHGDAAIA GQGILYEIIQ 370 380 390 400 410 420 MAQLDGYKTG GTIHIVINNQ VGFTTNYLDA RSSTYCTDIA KVTLSPVLHV NADDAEAVVH 430 440 450 460 470 480 AMLFALDFRM QFGRDVFIDL LGYRKYGHNE GDEPRFTQPL LYKIIAKHKN PRDIYAEKLL 490 500 510 520 530 540 AQNIIDGNFV KELETSYKQD LDDNLEASRK KSLTVITPFM QNEWEGFVQV SDDVMLQKVN 550 560 570 580 590 600 TKFDKKELDS IIETISTLPS DKKFINKISK IVNDRKTMYD NNTIDWGTAE TLAYGSLLTE 610 620 630 640 650 660 GYDVRISGQD VERGTFSHRH AVVKVEDSEE EVVLLNDIKG KKGNFNVFNS HLSEYGVLGF 670 680 690 700 710 720 DYGYALANPN ALTIWEAQFG DFSNGAQIMI DQYISCGEDK WNNQNGIVML LPHGYEGQGA 730 740 750 760 770 780 EHSSGRMERY LQLCARHNMV VADCTTPANF FHLLRRQMLT KYRKPLIVFT PKSLLRDPRC 790 800 810 820 830 840 VSTQDEIANG EFQETIDDIS VNKTQVKTLV FCTGKFYYDI TAERENLQRN DVAVVRIEQM 850 860 870 880 890 900 FPLPVEQLKA IVASYPNADD YVWAQEEPKN MGAYSFMLMN FDFIKWRLAS LKAYAAPAAG 910 920 SYTRAKRRHA DAIRMVFDKD LFR

References

[1]

"Complete genome sequence of the fish pathogen Flavobacterium psychrophilum." Duchaud E., Boussaha M., Loux V., Bernardet J.-F., Michel C., Kerouault B., Mondot S., Nicolas P., Bossy R., Caron C., Bessieres P., Gibrat J.-F., Claverol S., Dumetz F., Le Henaff M., Benmansour A. Nat. Biotechnol. 25:763-769(2007) [PubMed: 17592475] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: JIP02/86 / ATCC 49511.

Cross-references

Sequence databases
EMBL GenBank DDBJ	AM398681 Genomic DNA. Translation: CAL44462.1.
RefSeq	YP_001297263.1. NC_009613.1.
3D structure databases
ProteinModelPortal	A6H288.
ModBase	Search...
Protein-protein interaction databases
STRING	A6H288.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
GeneID	5299160.
GenomeReviews	Gene locus FP2408 in contig AM398681_GR.
KEGG	fps:FP2408.
NMPDR	fig|402612.4.peg.2365.
PATRIC	21909858. VBIFlaPsy4505_2464.
Phylogenomic databases
eggNOG	COG0567.
HOGENOM	HBG289950.
OMA	EGDEPAF.
ProtClustDB	PRK09404.
Family and domain databases
InterPro	IPR011603. 2oxoglutarate_DH_E1. IPR001017. DH_E1. IPR005475. Transketolase-like_Pyr-bd. [Graphical view]
KO	K00164.
PANTHER	PTHR23152. 2oxoglutarate_DH_E1. 1 hit.
Pfam	PF00676. E1_dh. 1 hit. PF02779. Transket_pyr. 1 hit. [Graphical view]
PIRSF	PIRSF000157. Oxoglu_dh_E1. 1 hit.
SMART	SM00861. Transket_pyr. 1 hit. [Graphical view]
TIGRFAMs	TIGR00239. 2oxo_dh_E1. 1 hit.
ProtoNet	Search...

Entry information

Entry name

A6H288_FLAPJ

Accession

Primary (citable) accession number: A6H288

Entry history

Integrated into UniProtKB/TrEMBL:	July 24, 2007
Last sequence update:	July 24, 2007
Last modified:	December 14, 2011
This is version 30 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)