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Protein
Submitted name:

Type II restriction endonuclease HpaII

Gene

hpaIIR

Organism
Flavobacterium psychrophilum (strain JIP02/86 / ATCC 49511)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Protein predictedi

Functioni

GO - Molecular functioni

  1. Type II site-specific deoxyribonuclease activity Source: UniProtKB-EC
Complete GO annotation...

Keywords - Molecular functioni

EndonucleaseImported, Hydrolase, Nuclease

Protein family/group databases

REBASEi15700. FpsJI.

Names & Taxonomyi

Protein namesi
Submitted name:
Type II restriction endonuclease HpaIIImported (EC:3.1.21.4Imported)
Gene namesi
Name:hpaIIRImported
Ordered Locus Names:FP2273Imported
OrganismiFlavobacterium psychrophilum (strain JIP02/86 / ATCC 49511)Imported
Taxonomic identifieri402612 [NCBI]
Taxonomic lineageiBacteriaBacteroidetesFlavobacteriiaFlavobacterialesFlavobacteriaceaeFlavobacterium
ProteomesiUP000006394: Chromosome

Interactioni

Protein-protein interaction databases

STRINGi402612.FP2273.

Family & Domainsi

Phylogenomic databases

eggNOGiNOG85368.
HOGENOMiHOG000290627.
KOiK01155.
OMAiEEHDGTR.
OrthoDBiEOG6Z0Q9P.

Family and domain databases

InterProiIPR019062. Restrct_endonuc_II_HpaII.
[Graphical view]
PfamiPF09561. RE_HpaII. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

A6H1V5-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MLSGNKGEWS EVYALFKLLG DKQLFAGDAN LNKVEELFYP IIKIIRNESG
60 70 80 90 100
GNFQYEINGD LVIISGGKEE LRIPVKTFTE QSAKLLSTIK GSTGAFNIPE
110 120 130 140 150
IETFMNSINC SSLKAKSTSK SDIRIVIHDQ RISQTAELGF SIKSQLGGQA
160 170 180 190 200
TLLNAGKTTN FVYQVSGFQP IENEIQTINE IDTKSKIKDR IESVKQFGGN
210 220 230 240 250
LDYLSLEQDV FKNNLVLIDS LLPNILAEIV KTFYTSNLSS IKDLTENINK
260 270 280 290 300
TNPLNYDNQF AHTFYEYKIK RFLTDVALGM TPSKVWNGIY DATGGYLIVK
310 320 330 340 350
ENGDVLCYHI YNRNQFEDYL FQNTKLETAS SSRHEFGKIY PENGKTYFKL

NLQIRFK
Length:357
Mass (Da):40,419
Last modified:July 24, 2007 - v1
Checksum:i2FC35470B2CEB826
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AM398681 Genomic DNA. Translation: CAL44329.1.
RefSeqiYP_001297130.1. NC_009613.3.

Genome annotation databases

EnsemblBacteriaiCAL44329; CAL44329; FP2273.
GeneIDi5300355.
KEGGifps:FP2273.
PATRICi21909574. VBIFlaPsy4505_2324.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AM398681 Genomic DNA. Translation: CAL44329.1.
RefSeqiYP_001297130.1. NC_009613.3.

3D structure databases

ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi402612.FP2273.

Protein family/group databases

REBASEi15700. FpsJI.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiCAL44329; CAL44329; FP2273.
GeneIDi5300355.
KEGGifps:FP2273.
PATRICi21909574. VBIFlaPsy4505_2324.

Phylogenomic databases

eggNOGiNOG85368.
HOGENOMiHOG000290627.
KOiK01155.
OMAiEEHDGTR.
OrthoDBiEOG6Z0Q9P.

Family and domain databases

InterProiIPR019062. Restrct_endonuc_II_HpaII.
[Graphical view]
PfamiPF09561. RE_HpaII. 1 hit.
[Graphical view]
ProtoNetiSearch...

Publicationsi

  1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: JIP02/86 / ATCC 49511Imported.

Entry informationi

Entry nameiA6H1V5_FLAPJ
AccessioniPrimary (citable) accession number: A6H1V5
Entry historyi
Integrated into UniProtKB/TrEMBL: July 24, 2007
Last sequence update: July 24, 2007
Last modified: March 4, 2015
This is version 43 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported

External Data

Dasty 3

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into Uniref entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.