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A6H1T2 (A6H1T2_FLAPJ) Unreviewed, UniProtKB/TrEMBL

Last modified January 25, 2012. Version 37. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein namesRecommended name:
Asparagine--tRNA ligase HAMAP MF_00534
EC=6.1.1.22 HAMAP MF_00534
Alternative name(s):
Asparaginyl-tRNA synthetase HAMAP MF_00534
Gene names
Name:asnS HAMAP MF_00534 EMBL CAL44306.1
Ordered Locus Names:FP2250
OrganismFlavobacterium psychrophilum (strain JIP02/86 / ATCC 49511)
Taxonomic identifier402612 [NCBI]
Taxonomic lineageBacteria › Bacteroidetes › Flavobacteriia › Flavobacteriales › Flavobacteriaceae › Flavobacterium

Protein attributes

Sequence length478 AA.
Sequence statusComplete.
Protein existenceInferred from homology

General annotation (Comments)

Catalytic activity

ATP + L-asparagine + tRNA(Asn) = AMP + diphosphate + L-asparaginyl-tRNA(Asn). HAMAP MF_00534 SAAS SAAS004522

Subunit structure

Homodimer By similarity. HAMAP MF_00534

Subcellular location

Cytoplasm By similarity HAMAP MF_00534.

Sequence similarities

Belongs to the class-II aminoacyl-tRNA synthetase family. HAMAP MF_00534 RuleBase RU003746

Sequences

Sequence LengthMass (Da)Tools
A6H1T2 [UniParc].

Last modified July 24, 2007. Version 1.
Checksum: 112779836463D9AE

FASTA47854,680
        10         20         30         40         50         60 
MRHTRILDLL NSTKTLQEVN VKGWVRTFRN NQFIALNDGS TIHNIQCVVD FENTADETLK 

        70         80         90        100        110        120 
RITTGAAVSV TGALVESQGA GQKYEVQVVK LEILGDSDAE KFPIQPKNKP SLDFLRENAH 

       130        140        150        160        170        180 
LRVRTNMFGA IMRVRSVLSY AVHSYFQEKG FVYVNTPIIT GSDAEGAGEM FKVTALPFDN 

       190        200        210        220        230        240 
TPRTEDGNVN YKEDFFGKET NLTVSGQLEG ETFAMALGQI YTFGPTFRAE NSNTSRHLAE 

       250        260        270        280        290        300 
FWMIEPEVAF NDLTDNMDLA EDFIQYVIKY TIDKCPDDLK FLESRLLDEE KSKPQAERSE 

       310        320        330        340        350        360 
MALLEKLNFV LENNFKRVSY TEAIDILRDC PPNKKKKFNY IINEWGADLQ SEHERYLVEK 

       370        380        390        400        410        420 
HFKCPVILFD YPANIKAFYM RLNEDGKTVR AMDILFPGIG EIVGGSQREE RFDVLVEKMK 

       430        440        450        460        470 
ALGIDEEELW WYLDTRRFGS AVHSGFGLGF ERLVLFVTGM TNIRDVIPFP RTPMNAEF

« Hide

References

[1]"Complete genome sequence of the fish pathogen Flavobacterium psychrophilum."
Duchaud E., Boussaha M., Loux V., Bernardet J.-F., Michel C., Kerouault B., Mondot S., Nicolas P., Bossy R., Caron C., Bessieres P., Gibrat J.-F., Claverol S., Dumetz F., Le Henaff M., Benmansour A.
Nat. Biotechnol. 25:763-769(2007) [PubMed: 17592475] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: JIP02/86 / ATCC 49511.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ		AM398681 Genomic DNA. Translation: CAL44306.1.
RefSeqYP_001297107.1. NC_009613.1.

3D structure databases

ProteinModelPortalA6H1T2.
ModBaseSearch...

Protein-protein interaction databases

STRINGA6H1T2.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

GeneID5300682.
GenomeReviewsGene locus FP2250 in contig AM398681_GR.
KEGGfps:FP2250.
NMPDRfig|402612.4.peg.2204.
PATRIC21909528. VBIFlaPsy4505_2301.

Phylogenomic databases

eggNOGCOG0017.
HOGENOMHBG745843.
OMAAIHRFFH.
ProtClustDBPRK03932.

Family and domain databases

HAMAPMF_00534. Asn_tRNA_synth.
[Tree]
InterProIPR004364. aa-tRNA-synt_II.
IPR018150. aa-tRNA-synt_II-like.
IPR006195. aa-tRNA-synth_II.
IPR004522. Asn-tRNA-synth_IIb.
IPR002312. Asp/Asn-tRNA-synth_IIb.
IPR012340. NA-bd_OB-fold.
IPR016027. NA-bd_OB-fold-like.
IPR004365. NA-bd_OB_tRNA-helicase.
[Graphical view]
Gene3DG3DSA:2.40.50.140. OB_NA_bd_sub. 1 hit.
KOK01893.
PANTHERPTHR22594. aa-tRNA-synt_II. 1 hit.
PTHR22594:SF6. PTHR22594:SF6. 1 hit.
PfamPF00152. tRNA-synt_2. 1 hit.
PF01336. tRNA_anti. 1 hit.
[Graphical view]
PRINTSPR01042. TRNASYNTHASP.
SUPFAMSSF50249. Nucleic_acid_OB. 1 hit.
TIGRFAMsTIGR00457. AsnS. 1 hit.
PROSITEPS50862. AA_TRNA_LIGASE_II. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameA6H1T2_FLAPJ
AccessionPrimary (citable) accession number: A6H1T2
Entry history
Integrated into UniProtKB/TrEMBL: July 24, 2007
Last sequence update: July 24, 2007
Last modified: January 25, 2012
This is version 37 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)
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