A6GZ72 (RL17_FLAPJ) Reviewed, UniProtKB/Swiss-Prot

Names and origin

Protein names

Recommended name:
50S ribosomal protein L17

Gene names

Name:	rplQ
Ordered Locus Names:	FP1312

Organism

Flavobacterium psychrophilum (strain JIP02/86 / ATCC 49511)

Taxonomic identifier

402612 [NCBI]

Taxonomic lineage

Bacteria › Bacteroidetes › Flavobacteriia › Flavobacteriales › Flavobacteriaceae › Flavobacterium

Protein attributes

Sequence length	162 AA.
Sequence status	Complete.
Protein existence	Inferred from homology

General annotation (Comments)

Subunit structure	Part of the 50S ribosomal subunit. Contacts protein L32 By similarity.
Sequence similarities	Belongs to the ribosomal protein L17P family.

Ontologies

Keywords
Molecular function	Ribonucleoprotein Ribosomal protein
Technical term	Complete proteome Reference proteome
Gene Ontology (GO)
Biological process	translation Inferred from electronic annotation. Source: InterPro
Cellular component	ribosome Inferred from electronic annotation. Source: UniProtKB-KW
Molecular function	structural constituent of ribosome Inferred from electronic annotation. Source: InterPro
Complete GO annotation...

Sequence annotation (Features)

	Feature key	Position(s)	Length	Description	Graphical view	Feature identifier
Molecule processing
	Chain	1 – 162	162	50S ribosomal protein L17 HAMAP MF_01368		PRO_1000055824

Sequences

	Sequence		Length	Mass (Da)
	A6GZ72 [UniParc]. Last modified July 24, 2007. Version 1. Checksum: AB1378B04E20EA7D	FASTA	162	18,124
	10 20 30 40 50 60 MRHGKKFNHL SRQKGHRAAM LANMACSLIE HKRINTTVAK AKALKQFVEP LITKSKDDTT 70 80 90 100 110 120 HNRRICFAYL RSKYAVTDLF RDVAAKVGDR PGGYTRIIKL GNRLGDNADM AMIELVDFNE 130 140 150 160 LYNGGKKEEV KTKSRRGGKA KKAEPTTEAP ANTTEETTDS AE

References

[1]

"Complete genome sequence of the fish pathogen Flavobacterium psychrophilum." Duchaud E., Boussaha M., Loux V., Bernardet J.-F., Michel C., Kerouault B., Mondot S., Nicolas P., Bossy R., Caron C., Bessieres P., Gibrat J.-F., Claverol S., Dumetz F., Le Henaff M., Benmansour A. Nat. Biotechnol. 25:763-769(2007) [PubMed: 17592475] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: JIP02/86 / ATCC 49511.

Cross-references

Sequence databases
EMBL GenBank DDBJ	AM398681 Genomic DNA. Translation: CAL43395.1.
RefSeq	YP_001296206.1. NC_009613.1.
3D structure databases
ProteinModelPortal	A6GZ72.
SMR	A6GZ72. Positions 1-120.
ModBase	Search...
Protein-protein interaction databases
STRING	A6GZ72.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
GeneID	5300199.
GenomeReviews	Gene locus FP1312 in contig AM398681_GR.
KEGG	fps:FP1312.
NMPDR	fig|402612.4.peg.1273.
PATRIC	21907536. VBIFlaPsy4505_1329.
Phylogenomic databases
eggNOG	COG0203.
HOGENOM	HBG704211.
OMA	FSELGPR.
ProtClustDB	PRK05591.
Family and domain databases
HAMAP	MF_01368. Ribosomal_L17. [Tree]
InterPro	IPR000456. Ribosomal_L17. [Graphical view]
Gene3D	G3DSA:3.90.1030.10. Ribosomal_L17. 1 hit.
KO	K02879.
PANTHER	PTHR14413. Ribosomal_L17. 1 hit.
Pfam	PF01196. Ribosomal_L17. 1 hit. [Graphical view]
SUPFAM	SSF64263. Ribosomal_L17. 1 hit.
TIGRFAMs	TIGR00059. L17. 1 hit.
PROSITE	PS01167. RIBOSOMAL_L17. 1 hit. [Graphical view]
ProtoNet	Search...

Entry information

Entry name

RL17_FLAPJ

Accession

Primary (citable) accession number: A6GZ72

Entry history

Integrated into UniProtKB/Swiss-Prot:	January 15, 2008
Last sequence update:	July 24, 2007
Last modified:	December 14, 2011
This is version 27 of the entry and version 1 of the sequence. [Complete history]

Entry status

Reviewed (UniProtKB/Swiss-Prot)

Annotation program

Prokaryotic Protein Annotation Program