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A6GYI4 (A6GYI4_FLAPJ) Unreviewed, UniProtKB/TrEMBL

Last modified April 16, 2014. Version 47. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Protein attributes

Sequence length202 AA.
Sequence statusComplete.
Protein existenceInferred from homology

General annotation (Comments)

Catalytic activity

ATP + thymidine = ADP + thymidine 5'-phosphate. HAMAP-Rule MF_00124 RuleBase RU000544 SAAS SAAS020634

Subunit structure

Homotetramer By similarity. HAMAP-Rule MF_00124

Subcellular location

Cytoplasm By similarity HAMAP-Rule MF_00124.

Sequence similarities

Belongs to the thymidine kinase family. HAMAP-Rule MF_00124

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Regions

Nucleotide binding21 – 288ATP By similarity HAMAP-Rule MF_00124
Nucleotide binding93 – 964ATP By similarity HAMAP-Rule MF_00124

Sites

Active site941Proton acceptor By similarity HAMAP-Rule MF_00124

Sequences

Sequence LengthMass (Da)Tools
A6GYI4 [UniParc].

Last modified July 24, 2007. Version 1.
Checksum: 5858A0C11E12CFF4

FASTA20222,748
        10         20         30         40         50         60 
MFLENTVNHK EQFGWIEVIC GSMFSGKTEE LIRRLKRAQF AKQKVEIFKP TIDTRYDDEM 

        70         80         90        100        110        120 
VVSHNKNEIR STPVPAAANI AILAQGCDVV GIDEAQFFDD EIVKICNDLA NSGIRVIVAG 

       130        140        150        160        170        180 
LDMDFKGNPF GPMPALMATA EYVTKVHAVC TRTGNLANYS FRKTDNDKLV MLGETEEYEP 

       190        200 
LSRAAYYNAM RENMIVKDAE HL 

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References

[1]"Complete genome sequence of the fish pathogen Flavobacterium psychrophilum."
Duchaud E., Boussaha M., Loux V., Bernardet J.-F., Michel C., Kerouault B., Mondot S., Nicolas P., Bossy R., Caron C., Bessieres P., Gibrat J.-F., Claverol S., Dumetz F., Le Henaff M., Benmansour A.
Nat. Biotechnol. 25:763-769(2007) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: JIP02/86 / ATCC 49511.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
AM398681 Genomic DNA. Translation: CAL43157.1.
RefSeqYP_001295968.1. NC_009613.3.

3D structure databases

ProteinModelPortalA6GYI4.
ModBaseSearch...
MobiDBSearch...

Protein-protein interaction databases

STRING402612.FP1063.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaCAL43157; CAL43157; FP1063.
GeneID5298800.
KEGGfps:FP1063.
PATRIC21907012. VBIFlaPsy4505_1077.

Phylogenomic databases

eggNOGCOG1435.
HOGENOMHOG000076390.
KOK00857.
OMAELICGSM.
OrthoDBEOG69D3J2.
ProtClustDBPRK04296.

Family and domain databases

HAMAPMF_00124. Thymidine_kinase.
InterProIPR027417. P-loop_NTPase.
IPR001267. Thymidine_kinase.
IPR020634. Thymidine_kinase_subgr.
[Graphical view]
PANTHERPTHR11441. PTHR11441. 1 hit.
PfamPF00265. TK. 1 hit.
[Graphical view]
PIRSFPIRSF035805. TK_cell. 1 hit.
SUPFAMSSF52540. SSF52540. 1 hit.
ProtoNetSearch...

Entry information

Entry nameA6GYI4_FLAPJ
AccessionPrimary (citable) accession number: A6GYI4
Entry history
Integrated into UniProtKB/TrEMBL: July 24, 2007
Last sequence update: July 24, 2007
Last modified: April 16, 2014
This is version 47 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)