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A6B539 (A6B539_VIBPA) Unreviewed, UniProtKB/TrEMBL

Last modified December 14, 2011. Version 17. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein namesSubmitted name:
Sensory box/ggdef family protein EMBL EDM58709.1
Gene names
ORF Names:A79_5786 EMBL EDM58709.1
OrganismVibrio parahaemolyticus AQ3810 EMBL EDM58709.1
Taxonomic identifier419109 [NCBI]
Taxonomic lineageBacteria › Proteobacteria › Gammaproteobacteria › Vibrionales › Vibrionaceae › Vibrio

Protein attributes

Sequence length407 AA.
Sequence statusComplete.
Protein existencePredicted

General annotation (Comments)

Caution

The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.

Sequences

Sequence LengthMass (Da)Tools
A6B539 [UniParc].

Last modified July 24, 2007. Version 1.
Checksum: 4432F89080FFD4F4

FASTA40746,775
        10         20         30         40         50         60 
MNTTYVARQP IFNRKRQTLG YELLFRDGES NAYPAHIESN RATYRLIVEN FLSLGTNPVI 

        70         80         90        100        110        120 
ASSRCFINFP HQSLVRRLPR SLPKNKIVVE VLETCQPTDD LLDAIRELYR EGYLIALDDF 

       130        140        150        160        170        180 
TLTPEWRRFL PYVHIVKLDI MAMGLEKACE LVKTHLAKRV KYHFLAERVE TAEEFEQAKA 

       190        200        210        220        230        240 
AGFKFFQGYF FSKPLVSQTK YVSPEQVLAL QLFREVCAPE PDFDRIESII TQDVALSYKL 

       250        260        270        280        290        300 
LRFVNTQITT LEVEISSFRQ ALIYLGQDKL KQFVSLVVAS YISSNKPREL YNLSLQRAQF 

       310        320        330        340        350        360 
CELMSRYQPF SHLNEQGFMV GLLSILDAML DLSIEALVKQ LPLSDSVQQA LLHRKGEYGV 

       370        380        390        400 
LISLEECYER ADWHGVEKLS GQLGLSFDEV KASLSEAVRW SQSVVTV

« Hide

References

[1]"Annotation of Vibrio parahaemolyticus AQ3810."
Heidelberg J., Sebastian Y.
Submitted (JAN-2007) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE.
Strain: AQ3810 EMBL EDM58709.1.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ		AAWQ01000055 Genomic DNA. Translation: EDM58709.1.

3D structure databases

ProteinModelPortalA6B539.
ModBaseSearch...

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

PATRIC38615111. VBIVibPar22798_2100.

Phylogenomic databases

OMARQPIFNR.

Family and domain databases

InterProIPR014408. dGMP_Pdiesterase_EAL/HD-GYP.
IPR001633. Diguanylate_PEstase_EAL_dom.
IPR013976. HDOD.
[Graphical view]
Gene3DG3DSA:3.20.20.450. G3DSA:3.20.20.450. 1 hit.
G3DSA:1.10.3150.10. HDOD. 1 hit.
PfamPF00563. EAL. 1 hit.
PF08668. HDOD. 1 hit.
[Graphical view]
PIRSFPIRSF003180. DiGMPpdiest_YuxH. 1 hit.
SMARTSM00052. EAL. 1 hit.
[Graphical view]
SUPFAMSSF141868. SSF141868. 1 hit.
PROSITEPS50883. EAL. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameA6B539_VIBPA
AccessionPrimary (citable) accession number: A6B539
Entry history
Integrated into UniProtKB/TrEMBL: July 24, 2007
Last sequence update: July 24, 2007
Last modified: December 14, 2011
This is version 17 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)
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