A5Z5V6 (A5Z5V6_9FIRM) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
SCP-like protein EMBL EDM51781.1

Gene names

ORF Names:

EUBVEN_01088 EMBL EDM51781.1

Organism

Eubacterium ventriosum ATCC 27560 EMBL EDM51781.1

Taxonomic identifier

411463 [NCBI]

Taxonomic lineage

cellular organisms › Bacteria › Firmicutes › Clostridia › Clostridiales › Eubacteriaceae › Eubacterium › Eubacterium ventriosum

Protein attributes

Sequence length	739 AA.
Sequence status	Complete.
Protein existence	Evidence at protein level

General annotation (Comments)

Sequence similarities	Contains 1 fibronectin type-III domain. RuleBase RU000718
Caution	The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data. EMBL EDM51781.1

Ontologies

Keywords
Technical term	3D-structure PDB 4H09
Gene Ontology (GO)
None. [Check GOA]

Sequences

	Sequence		Length	Mass (Da)
	A5Z5V6 [UniParc]. Last modified July 24, 2007. Version 1. Checksum: 6EFBA2E882085185	FASTA	739	81,429
	10 20 30 40 50 60 MKNLFKRIIT TILVLTMVMG FNVPFSATTV MAASITYNVS STIKGVLTDD GVLTISGTGA 70 80 90 100 110 120 MPDYTKIANI PWYKDRDRIS EVRVNSGITS IGEANFNSCY NMTKVTVAST VTSIGDGAFA 130 140 150 160 170 180 DTKLQSYTGM ERVKKFGDYV FQGTDLDDFE FPGATTEIGN YIFYNSSVKR IVIPKSVTTI 190 200 210 220 230 240 KDGIGYKAEN LEKIEVSSNN KNYVAENYVL YNKNKTILES YPAAKTGTEF TIPSTVKTVT 250 260 270 280 290 300 AYGFSYGKNL KKITITSGVT TLGDGAFYGM KALDEIAIPK NVTSIGSFLL QNCTALKTLN 310 320 330 340 350 360 FYAKVKTVPY LLCSGCSNLT KVVMDNSAIE TLEPRVFMDC VKLSSVTLPT ALKTIQVYAF 370 380 390 400 410 420 KNCKALSTIS YPKSITLIES GAFEGSSITK YPTWLSKGNN GDYGIFTKIK YKGTDKYSEA 430 440 450 460 470 480 YKVLKIVNKE RKSKGLSELK MDKDLLDVAM QRAAEVALYF SHTRPDGSSC FSATDKMEAE 490 500 510 520 530 540 NIAGGQSSAD AVMTSWMNSA GHRANILTSY FKTIGIGCFT QGGTVFWVQC FGTDTPATVS 550 560 570 580 590 600 RPADKNVVVT VTVDGDFLSK TKLRLDSSSY NLKIGNKKTV KLYVQNPEWA SQNVLLDNSN 610 620 630 640 650 660 FTFKSYNTKK ATISATGKIN AKTVGKYKIK ATLKNATGTS VTKSGKITFP QPKIKVTVKK 670 680 690 700 710 720 KKAIVAWKKL KAAKGYYVYR REAKGKKYTK WKKVKNIKKN TTVKYKDSKL KKGKTYQYKV 730 VAYNRKNKGT SAIKKIVIK

References

[1]	Fulton L., Clifton S., Fulton B., Xu J., Minx P., Pepin K.H., Johnson M., Thiruvilangam P., Bhonagiri V., Nash W.E., Mardis E.R., Wilson R.K. Submitted (MAR-2007) to the EMBL/GenBank/DDBJ databases Cited for: NUCLEOTIDE SEQUENCE. Strain: ATCC 27560 EMBL EDM51781.1.
[2]	"Draft genome sequence of Eubacterium ventriosum (ATCC 27560)." Sudarsanam P., Ley R., Guruge J., Turnbaugh P.J., Mahowald M., Liep D., Gordon J. Submitted (APR-2007) to the EMBL/GenBank/DDBJ databases Cited for: NUCLEOTIDE SEQUENCE. Strain: ATCC 27560 EMBL EDM51781.1.
[3]	"Crystal structure of a hypothetical leucine rich repeat protein (EUBVEN_01088) from Eubacterium ventriosum ATCC 27560 at 2.50 A resolution (CASP Target)." Joint Center for Structural Genomics (JCSG) Submitted (SEP-2012) to the PDB data bank Cited for: X-RAY CRYSTALLOGRAPHY (2.50 ANGSTROMS) OF 33-410.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ

AAVL02000031 Genomic DNA. Translation: EDM51781.1.

3D structure databases

PDBe
RCSB PDB
PDBj

Entry	Method	Resolution (Å)	Chain	Positions	PDBsum
4H09	X-ray	2.50	A/B/C/D/E	33-410	[»]

ProteinModelPortal

A5Z5V6.

ModBase

Search...

Protocols and materials databases

StructuralBiologyKnowledgebase

Search...

Genome annotation databases

EnsemblBacteria

EDM51781; EDM51781; EUBVEN_01088.

PATRIC

31247449. VBIEubVen137708_1781.

Family and domain databases

Gene3D

2.60.40.10. 1 hit.
3.40.33.10. 1 hit.

InterPro

IPR003343. Big_2.
IPR014044. CAP_domain.
IPR003961. Fibronectin_type3.
IPR013783. Ig-like_fold.
IPR008964. Invasin/intimin_cell_adhesion.
IPR026906. LRR_5.
[Graphical view]

Pfam

PF02368. Big_2. 1 hit.
PF00188. CAP. 1 hit.
PF00041. fn3. 1 hit.
PF13306. LRR_5. 2 hits.
[Graphical view]

SMART

SM00635. BID_2. 1 hit.
SM00060. FN3. 1 hit.
[Graphical view]

SUPFAM

SSF49265. FN_III-like. 1 hit.
SSF49373. Invasin_intimin. 1 hit.
SSF55797. SCP-like_extracellular. 1 hit.

PROSITE

PS50853. FN3. 1 hit.
[Graphical view]

ProtoNet

Search...

Entry information

Entry name

A5Z5V6_9FIRM

Accession

Primary (citable) accession number: A5Z5V6

Entry history

Integrated into UniProtKB/TrEMBL:	July 24, 2007
Last sequence update:	July 24, 2007
Last modified:	April 3, 2013
This is version 23 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)