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A5Z5V6

- A5Z5V6_9FIRM

UniProt

A5Z5V6 - A5Z5V6_9FIRM

Protein
Submitted name:

SCP-like protein

Gene

EUBVEN_01088

Organism
Eubacterium ventriosum ATCC 27560
Status
Unreviewed - Annotation score: 1 out of 5- Experimental evidence at protein leveli
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    • History
      Entry version 25 (01 Oct 2014)
      Sequence version 1 (24 Jul 2007)
      Previous versions | rss
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    Names & Taxonomyi

    Protein namesi
    Submitted name:
    SCP-like proteinImported
    Gene namesi
    ORF Names:EUBVEN_01088Imported
    OrganismiEubacterium ventriosum ATCC 27560Imported
    Taxonomic identifieri411463 [NCBI]
    Taxonomic lineageiBacteriaFirmicutesClostridiaClostridialesEubacteriaceaeEubacterium

    Structurei

    3D structure databases

    Select the link destinations:
    PDBe
    RCSB PDB
    PDBj
    Links Updated
    EntryMethodResolution (Å)ChainPositionsPDBsum
    4H09X-ray2.50A/B/C/D/E33-410[»]
    ProteinModelPortaliA5Z5V6.
    ModBaseiSearch...
    MobiDBiSearch...

    Family & Domainsi

    Sequence similaritiesi

    Contains 1 fibronectin type-III domain.UniRule annotation

    Family and domain databases

    Gene3Di2.60.40.10. 1 hit.
    3.40.33.10. 1 hit.
    InterProiIPR003343. Big_2.
    IPR014044. CAP_domain.
    IPR003961. Fibronectin_type3.
    IPR013783. Ig-like_fold.
    IPR008964. Invasin/intimin_cell_adhesion.
    IPR026906. LRR_5.
    [Graphical view]
    PfamiPF02368. Big_2. 1 hit.
    PF00188. CAP. 1 hit.
    PF00041. fn3. 1 hit.
    PF13306. LRR_5. 2 hits.
    [Graphical view]
    SMARTiSM00635. BID_2. 1 hit.
    SM00060. FN3. 1 hit.
    [Graphical view]
    SUPFAMiSSF49265. SSF49265. 1 hit.
    SSF49373. SSF49373. 1 hit.
    SSF55797. SSF55797. 1 hit.
    PROSITEiPS50853. FN3. 1 hit.
    [Graphical view]

    Sequencei

    Sequence statusi: Complete.

    A5Z5V6-1 [UniParc]FASTAAdd to Basket

    « Hide

    MKNLFKRIIT TILVLTMVMG FNVPFSATTV MAASITYNVS STIKGVLTDD    50
    GVLTISGTGA MPDYTKIANI PWYKDRDRIS EVRVNSGITS IGEANFNSCY 100
    NMTKVTVAST VTSIGDGAFA DTKLQSYTGM ERVKKFGDYV FQGTDLDDFE 150
    FPGATTEIGN YIFYNSSVKR IVIPKSVTTI KDGIGYKAEN LEKIEVSSNN 200
    KNYVAENYVL YNKNKTILES YPAAKTGTEF TIPSTVKTVT AYGFSYGKNL 250
    KKITITSGVT TLGDGAFYGM KALDEIAIPK NVTSIGSFLL QNCTALKTLN 300
    FYAKVKTVPY LLCSGCSNLT KVVMDNSAIE TLEPRVFMDC VKLSSVTLPT 350
    ALKTIQVYAF KNCKALSTIS YPKSITLIES GAFEGSSITK YPTWLSKGNN 400
    GDYGIFTKIK YKGTDKYSEA YKVLKIVNKE RKSKGLSELK MDKDLLDVAM 450
    QRAAEVALYF SHTRPDGSSC FSATDKMEAE NIAGGQSSAD AVMTSWMNSA 500
    GHRANILTSY FKTIGIGCFT QGGTVFWVQC FGTDTPATVS RPADKNVVVT 550
    VTVDGDFLSK TKLRLDSSSY NLKIGNKKTV KLYVQNPEWA SQNVLLDNSN 600
    FTFKSYNTKK ATISATGKIN AKTVGKYKIK ATLKNATGTS VTKSGKITFP 650
    QPKIKVTVKK KKAIVAWKKL KAAKGYYVYR REAKGKKYTK WKKVKNIKKN 700
    TTVKYKDSKL KKGKTYQYKV VAYNRKNKGT SAIKKIVIK 739
    Length:739
    Mass (Da):81,429
    Last modified:July 24, 2007 - v1
    Checksum:i6EFBA2E882085185
    GO

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    AAVL02000031 Genomic DNA. Translation: EDM51781.1.

    Genome annotation databases

    EnsemblBacteriaiEDM51781; EDM51781; EUBVEN_01088.
    PATRICi31247449. VBIEubVen137708_1781.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    AAVL02000031 Genomic DNA. Translation: EDM51781.1 .

    3D structure databases

    Select the link destinations:
    PDBe
    RCSB PDB
    PDBj
    Links Updated
    Entry Method Resolution (Å) Chain Positions PDBsum
    4H09 X-ray 2.50 A/B/C/D/E 33-410 [» ]
    ProteinModelPortali A5Z5V6.
    ModBasei Search...
    MobiDBi Search...

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Genome annotation databases

    EnsemblBacteriai EDM51781 ; EDM51781 ; EUBVEN_01088 .
    PATRICi 31247449. VBIEubVen137708_1781.

    Family and domain databases

    Gene3Di 2.60.40.10. 1 hit.
    3.40.33.10. 1 hit.
    InterProi IPR003343. Big_2.
    IPR014044. CAP_domain.
    IPR003961. Fibronectin_type3.
    IPR013783. Ig-like_fold.
    IPR008964. Invasin/intimin_cell_adhesion.
    IPR026906. LRR_5.
    [Graphical view ]
    Pfami PF02368. Big_2. 1 hit.
    PF00188. CAP. 1 hit.
    PF00041. fn3. 1 hit.
    PF13306. LRR_5. 2 hits.
    [Graphical view ]
    SMARTi SM00635. BID_2. 1 hit.
    SM00060. FN3. 1 hit.
    [Graphical view ]
    SUPFAMi SSF49265. SSF49265. 1 hit.
    SSF49373. SSF49373. 1 hit.
    SSF55797. SSF55797. 1 hit.
    PROSITEi PS50853. FN3. 1 hit.
    [Graphical view ]
    ProtoNeti Search...

    Publicationsi

    1. Cited for: NUCLEOTIDE SEQUENCE.
      Strain: ATCC 27560Imported.
    2. "Draft genome sequence of Eubacterium ventriosum (ATCC 27560)."
      Sudarsanam P., Ley R., Guruge J., Turnbaugh P.J., Mahowald M., Liep D., Gordon J.
      Submitted (APR-2007) to the EMBL/GenBank/DDBJ databases
      Cited for: NUCLEOTIDE SEQUENCE.
      Strain: ATCC 27560Imported.
    3. "Crystal structure of a hypothetical leucine rich repeat protein (EUBVEN_01088) from Eubacterium ventriosum ATCC 27560 at 2.50 A resolution (CASP Target)."
      Joint Center for Structural Genomics (JCSG)
      Submitted (SEP-2012) to the PDB data bank
      Cited for: X-RAY CRYSTALLOGRAPHY (2.50 ANGSTROMS) OF 33-410.

    Entry informationi

    Entry nameiA5Z5V6_9FIRM
    AccessioniPrimary (citable) accession number: A5Z5V6
    Entry historyi
    Integrated into UniProtKB/TrEMBL: July 24, 2007
    Last sequence update: July 24, 2007
    Last modified: October 1, 2014
    This is version 25 of the entry and version 1 of the sequence. [Complete history]
    Entry statusiUnreviewed (UniProtKB/TrEMBL)

    Miscellaneousi

    Caution

    The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.Imported

    Keywords - Technical termi

    3D-structureImported

    External Data

    Dasty 3