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A5Z5V6

- A5Z5V6_9FIRM

UniProt

A5Z5V6 - A5Z5V6_9FIRM

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Protein
Submitted name: SCP-like protein
Gene
EUBVEN_01088
Organism
Eubacterium ventriosum ATCC 27560
Status
Unreviewed - Annotation score: 1 out of 5 - Experimental evidence at protein leveli

Names & Taxonomyi

Protein namesi
Submitted name:
SCP-like proteinImported
Gene namesi
ORF Names:EUBVEN_01088Imported
OrganismiEubacterium ventriosum ATCC 27560Imported
Taxonomic identifieri411463 [NCBI]
Taxonomic lineageiBacteriaFirmicutesClostridiaClostridialesEubacteriaceaeEubacterium

Structurei

3D structure databases

Select the link destinations:
PDBe
RCSB PDB
PDBj
Links Updated
EntryMethodResolution (Å)ChainPositionsPDBsum
4H09X-ray2.50A/B/C/D/E33-410[»]
ProteinModelPortaliA5Z5V6.

Family & Domainsi

Sequence similaritiesi

Contains 1 fibronectin type-III domain.UniRule annotation

Family and domain databases

Gene3Di2.60.40.10. 1 hit.
3.40.33.10. 1 hit.
InterProiIPR003343. Big_2.
IPR014044. CAP_domain.
IPR003961. Fibronectin_type3.
IPR013783. Ig-like_fold.
IPR008964. Invasin/intimin_cell_adhesion.
IPR026906. LRR_5.
[Graphical view]
PfamiPF02368. Big_2. 1 hit.
PF00188. CAP. 1 hit.
PF00041. fn3. 1 hit.
PF13306. LRR_5. 2 hits.
[Graphical view]
SMARTiSM00635. BID_2. 1 hit.
SM00060. FN3. 1 hit.
[Graphical view]
SUPFAMiSSF49265. SSF49265. 1 hit.
SSF49373. SSF49373. 1 hit.
SSF55797. SSF55797. 1 hit.
PROSITEiPS50853. FN3. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

A5Z5V6-1 [UniParc]FASTAAdd to Basket

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MKNLFKRIIT TILVLTMVMG FNVPFSATTV MAASITYNVS STIKGVLTDD    50
GVLTISGTGA MPDYTKIANI PWYKDRDRIS EVRVNSGITS IGEANFNSCY 100
NMTKVTVAST VTSIGDGAFA DTKLQSYTGM ERVKKFGDYV FQGTDLDDFE 150
FPGATTEIGN YIFYNSSVKR IVIPKSVTTI KDGIGYKAEN LEKIEVSSNN 200
KNYVAENYVL YNKNKTILES YPAAKTGTEF TIPSTVKTVT AYGFSYGKNL 250
KKITITSGVT TLGDGAFYGM KALDEIAIPK NVTSIGSFLL QNCTALKTLN 300
FYAKVKTVPY LLCSGCSNLT KVVMDNSAIE TLEPRVFMDC VKLSSVTLPT 350
ALKTIQVYAF KNCKALSTIS YPKSITLIES GAFEGSSITK YPTWLSKGNN 400
GDYGIFTKIK YKGTDKYSEA YKVLKIVNKE RKSKGLSELK MDKDLLDVAM 450
QRAAEVALYF SHTRPDGSSC FSATDKMEAE NIAGGQSSAD AVMTSWMNSA 500
GHRANILTSY FKTIGIGCFT QGGTVFWVQC FGTDTPATVS RPADKNVVVT 550
VTVDGDFLSK TKLRLDSSSY NLKIGNKKTV KLYVQNPEWA SQNVLLDNSN 600
FTFKSYNTKK ATISATGKIN AKTVGKYKIK ATLKNATGTS VTKSGKITFP 650
QPKIKVTVKK KKAIVAWKKL KAAKGYYVYR REAKGKKYTK WKKVKNIKKN 700
TTVKYKDSKL KKGKTYQYKV VAYNRKNKGT SAIKKIVIK 739
Length:739
Mass (Da):81,429
Last modified:July 24, 2007 - v1
Checksum:i6EFBA2E882085185
GO

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
AAVL02000031 Genomic DNA. Translation: EDM51781.1.

Genome annotation databases

EnsemblBacteriaiEDM51781; EDM51781; EUBVEN_01088.
PATRICi31247449. VBIEubVen137708_1781.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
AAVL02000031 Genomic DNA. Translation: EDM51781.1 .

3D structure databases

Select the link destinations:
PDBe
RCSB PDB
PDBj
Links Updated
Entry Method Resolution (Å) Chain Positions PDBsum
4H09 X-ray 2.50 A/B/C/D/E 33-410 [» ]
ProteinModelPortali A5Z5V6.
ModBasei Search...
MobiDBi Search...

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

EnsemblBacteriai EDM51781 ; EDM51781 ; EUBVEN_01088 .
PATRICi 31247449. VBIEubVen137708_1781.

Family and domain databases

Gene3Di 2.60.40.10. 1 hit.
3.40.33.10. 1 hit.
InterProi IPR003343. Big_2.
IPR014044. CAP_domain.
IPR003961. Fibronectin_type3.
IPR013783. Ig-like_fold.
IPR008964. Invasin/intimin_cell_adhesion.
IPR026906. LRR_5.
[Graphical view ]
Pfami PF02368. Big_2. 1 hit.
PF00188. CAP. 1 hit.
PF00041. fn3. 1 hit.
PF13306. LRR_5. 2 hits.
[Graphical view ]
SMARTi SM00635. BID_2. 1 hit.
SM00060. FN3. 1 hit.
[Graphical view ]
SUPFAMi SSF49265. SSF49265. 1 hit.
SSF49373. SSF49373. 1 hit.
SSF55797. SSF55797. 1 hit.
PROSITEi PS50853. FN3. 1 hit.
[Graphical view ]
ProtoNeti Search...

Publicationsi

  1. Cited for: NUCLEOTIDE SEQUENCE.
    Strain: ATCC 27560Imported.
  2. "Draft genome sequence of Eubacterium ventriosum (ATCC 27560)."
    Sudarsanam P., Ley R., Guruge J., Turnbaugh P.J., Mahowald M., Liep D., Gordon J.
    Submitted (APR-2007) to the EMBL/GenBank/DDBJ databases
    Cited for: NUCLEOTIDE SEQUENCE.
    Strain: ATCC 27560Imported.
  3. "Crystal structure of a hypothetical leucine rich repeat protein (EUBVEN_01088) from Eubacterium ventriosum ATCC 27560 at 2.50 A resolution (CASP Target)."
    Joint Center for Structural Genomics (JCSG)
    Submitted (SEP-2012) to the PDB data bank
    Cited for: X-RAY CRYSTALLOGRAPHY (2.50 ANGSTROMS) OF 33-410.

Entry informationi

Entry nameiA5Z5V6_9FIRM
AccessioniPrimary (citable) accession number: A5Z5V6
Entry historyi
Integrated into UniProtKB/TrEMBL: July 24, 2007
Last sequence update: July 24, 2007
Last modified: October 16, 2013
This is version 24 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Caution

The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.Imported

Keywords - Technical termi

3D-structureImported

External Data

Dasty 3