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A5Z5V6 (A5Z5V6_9FIRM) Unreviewed, UniProtKB/TrEMBL

Last modified October 16, 2013. Version 24. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
to top of pageNames·Attributes·General annotation·Ontologies·Sequences·References·Cross-refs·Entry infoCustomize order

Names and origin

Protein names
Gene names
ORF Names:EUBVEN_01088 EMBL EDM51781.1
OrganismEubacterium ventriosum ATCC 27560 EMBL EDM51781.1
Taxonomic identifier411463 [NCBI]
Taxonomic lineageBacteriaFirmicutesClostridiaClostridialesEubacteriaceaeEubacterium

Protein attributes

Sequence length739 AA.
Sequence statusComplete.
Protein existenceEvidence at protein level

General annotation (Comments)

Sequence similarities

Contains 1 fibronectin type-III domain. RuleBase RU000718

Caution

The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data. EMBL EDM51781.1

Ontologies

Keywords
   Technical term3D-structure PDB 4H09
Gene Ontology (GO)
None. [Check GOA]

Sequences

Sequence LengthMass (Da)Tools
A5Z5V6 [UniParc].

Last modified July 24, 2007. Version 1.
Checksum: 6EFBA2E882085185

FASTA73981,429
        10         20         30         40         50         60 
MKNLFKRIIT TILVLTMVMG FNVPFSATTV MAASITYNVS STIKGVLTDD GVLTISGTGA 

        70         80         90        100        110        120 
MPDYTKIANI PWYKDRDRIS EVRVNSGITS IGEANFNSCY NMTKVTVAST VTSIGDGAFA 

       130        140        150        160        170        180 
DTKLQSYTGM ERVKKFGDYV FQGTDLDDFE FPGATTEIGN YIFYNSSVKR IVIPKSVTTI 

       190        200        210        220        230        240 
KDGIGYKAEN LEKIEVSSNN KNYVAENYVL YNKNKTILES YPAAKTGTEF TIPSTVKTVT 

       250        260        270        280        290        300 
AYGFSYGKNL KKITITSGVT TLGDGAFYGM KALDEIAIPK NVTSIGSFLL QNCTALKTLN 

       310        320        330        340        350        360 
FYAKVKTVPY LLCSGCSNLT KVVMDNSAIE TLEPRVFMDC VKLSSVTLPT ALKTIQVYAF 

       370        380        390        400        410        420 
KNCKALSTIS YPKSITLIES GAFEGSSITK YPTWLSKGNN GDYGIFTKIK YKGTDKYSEA 

       430        440        450        460        470        480 
YKVLKIVNKE RKSKGLSELK MDKDLLDVAM QRAAEVALYF SHTRPDGSSC FSATDKMEAE 

       490        500        510        520        530        540 
NIAGGQSSAD AVMTSWMNSA GHRANILTSY FKTIGIGCFT QGGTVFWVQC FGTDTPATVS 

       550        560        570        580        590        600 
RPADKNVVVT VTVDGDFLSK TKLRLDSSSY NLKIGNKKTV KLYVQNPEWA SQNVLLDNSN 

       610        620        630        640        650        660 
FTFKSYNTKK ATISATGKIN AKTVGKYKIK ATLKNATGTS VTKSGKITFP QPKIKVTVKK 

       670        680        690        700        710        720 
KKAIVAWKKL KAAKGYYVYR REAKGKKYTK WKKVKNIKKN TTVKYKDSKL KKGKTYQYKV 

       730 
VAYNRKNKGT SAIKKIVIK 

« Hide

References

[1]Fulton L., Clifton S., Fulton B., Xu J., Minx P., Pepin K.H., Johnson M., Thiruvilangam P., Bhonagiri V., Nash W.E., Mardis E.R., Wilson R.K.
Submitted (MAR-2007) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE.
Strain: ATCC 27560 EMBL EDM51781.1.
[2]"Draft genome sequence of Eubacterium ventriosum (ATCC 27560)."
Sudarsanam P., Ley R., Guruge J., Turnbaugh P.J., Mahowald M., Liep D., Gordon J.
Submitted (APR-2007) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE.
Strain: ATCC 27560 EMBL EDM51781.1.
[3]"Crystal structure of a hypothetical leucine rich repeat protein (EUBVEN_01088) from Eubacterium ventriosum ATCC 27560 at 2.50 A resolution (CASP Target)."
Joint Center for Structural Genomics (JCSG)
Submitted (SEP-2012) to the PDB data bank
Cited for: X-RAY CRYSTALLOGRAPHY (2.50 ANGSTROMS) OF 33-410.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
AAVL02000031 Genomic DNA. Translation: EDM51781.1.

3D structure databases

PDBe
RCSB-PDB
PDBj
EntryMethodResolution (Å)ChainPositionsPDBsum
4H09X-ray2.50A/B/C/D/E33-410[»]
ProteinModelPortalA5Z5V6.
ModBaseSearch...
MobiDBSearch...

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaEDM51781; EDM51781; EUBVEN_01088.
PATRIC31247449. VBIEubVen137708_1781.

Family and domain databases

Gene3D2.60.40.10. 1 hit.
3.40.33.10. 1 hit.
InterProIPR003343. Big_2.
IPR014044. CAP_domain.
IPR003961. Fibronectin_type3.
IPR013783. Ig-like_fold.
IPR008964. Invasin/intimin_cell_adhesion.
IPR026906. LRR_5.
[Graphical view]
PfamPF02368. Big_2. 1 hit.
PF00188. CAP. 1 hit.
PF00041. fn3. 1 hit.
PF13306. LRR_5. 2 hits.
[Graphical view]
SMARTSM00635. BID_2. 1 hit.
SM00060. FN3. 1 hit.
[Graphical view]
SUPFAMSSF49265. SSF49265. 1 hit.
SSF49373. SSF49373. 1 hit.
SSF55797. SSF55797. 1 hit.
PROSITEPS50853. FN3. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameA5Z5V6_9FIRM
AccessionPrimary (citable) accession number: A5Z5V6
Entry history
Integrated into UniProtKB/TrEMBL: July 24, 2007
Last sequence update: July 24, 2007
Last modified: October 16, 2013
This is version 24 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)