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A5Z5V6

- A5Z5V6_9FIRM

UniProt

A5Z5V6 - A5Z5V6_9FIRM

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Protein
Submitted name:

SCP-like protein

Gene

EUBVEN_01088

Organism
Eubacterium ventriosum ATCC 27560
Status
Unreviewed - Annotation score: 1 out of 5- Experimental evidence at protein leveli

Names & Taxonomyi

Protein namesi
Submitted name:
SCP-like proteinImported
Gene namesi
ORF Names:EUBVEN_01088Imported
OrganismiEubacterium ventriosum ATCC 27560Imported
Taxonomic identifieri411463 [NCBI]
Taxonomic lineageiBacteriaFirmicutesClostridiaClostridialesEubacteriaceaeEubacterium

Structurei

3D structure databases

Select the link destinations:
PDBe
RCSB PDB
PDBj
Links Updated
EntryMethodResolution (Å)ChainPositionsPDBsum
4H09X-ray2.50A/B/C/D/E33-410[»]
ProteinModelPortaliA5Z5V6.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Sequence similaritiesi

Contains 1 fibronectin type-III domain.UniRule annotation

Family and domain databases

Gene3Di2.60.40.10. 1 hit.
3.40.33.10. 1 hit.
InterProiIPR003343. Big_2.
IPR014044. CAP_domain.
IPR003961. Fibronectin_type3.
IPR013783. Ig-like_fold.
IPR008964. Invasin/intimin_cell_adhesion.
IPR026906. LRR_5.
[Graphical view]
PfamiPF02368. Big_2. 1 hit.
PF00188. CAP. 1 hit.
PF00041. fn3. 1 hit.
PF13306. LRR_5. 2 hits.
[Graphical view]
SMARTiSM00635. BID_2. 1 hit.
SM00060. FN3. 1 hit.
[Graphical view]
SUPFAMiSSF49265. SSF49265. 1 hit.
SSF49373. SSF49373. 1 hit.
SSF55797. SSF55797. 1 hit.
PROSITEiPS50853. FN3. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

A5Z5V6-1 [UniParc]FASTAAdd to Basket

« Hide

        10         20         30         40         50
MKNLFKRIIT TILVLTMVMG FNVPFSATTV MAASITYNVS STIKGVLTDD
60 70 80 90 100
GVLTISGTGA MPDYTKIANI PWYKDRDRIS EVRVNSGITS IGEANFNSCY
110 120 130 140 150
NMTKVTVAST VTSIGDGAFA DTKLQSYTGM ERVKKFGDYV FQGTDLDDFE
160 170 180 190 200
FPGATTEIGN YIFYNSSVKR IVIPKSVTTI KDGIGYKAEN LEKIEVSSNN
210 220 230 240 250
KNYVAENYVL YNKNKTILES YPAAKTGTEF TIPSTVKTVT AYGFSYGKNL
260 270 280 290 300
KKITITSGVT TLGDGAFYGM KALDEIAIPK NVTSIGSFLL QNCTALKTLN
310 320 330 340 350
FYAKVKTVPY LLCSGCSNLT KVVMDNSAIE TLEPRVFMDC VKLSSVTLPT
360 370 380 390 400
ALKTIQVYAF KNCKALSTIS YPKSITLIES GAFEGSSITK YPTWLSKGNN
410 420 430 440 450
GDYGIFTKIK YKGTDKYSEA YKVLKIVNKE RKSKGLSELK MDKDLLDVAM
460 470 480 490 500
QRAAEVALYF SHTRPDGSSC FSATDKMEAE NIAGGQSSAD AVMTSWMNSA
510 520 530 540 550
GHRANILTSY FKTIGIGCFT QGGTVFWVQC FGTDTPATVS RPADKNVVVT
560 570 580 590 600
VTVDGDFLSK TKLRLDSSSY NLKIGNKKTV KLYVQNPEWA SQNVLLDNSN
610 620 630 640 650
FTFKSYNTKK ATISATGKIN AKTVGKYKIK ATLKNATGTS VTKSGKITFP
660 670 680 690 700
QPKIKVTVKK KKAIVAWKKL KAAKGYYVYR REAKGKKYTK WKKVKNIKKN
710 720 730
TTVKYKDSKL KKGKTYQYKV VAYNRKNKGT SAIKKIVIK
Length:739
Mass (Da):81,429
Last modified:July 24, 2007 - v1
Checksum:i6EFBA2E882085185
GO

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
AAVL02000031 Genomic DNA. Translation: EDM51781.1.

Genome annotation databases

EnsemblBacteriaiEDM51781; EDM51781; EUBVEN_01088.
PATRICi31247449. VBIEubVen137708_1781.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
AAVL02000031 Genomic DNA. Translation: EDM51781.1 .

3D structure databases

Select the link destinations:
PDBe
RCSB PDB
PDBj
Links Updated
Entry Method Resolution (Å) Chain Positions PDBsum
4H09 X-ray 2.50 A/B/C/D/E 33-410 [» ]
ProteinModelPortali A5Z5V6.
ModBasei Search...
MobiDBi Search...

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

EnsemblBacteriai EDM51781 ; EDM51781 ; EUBVEN_01088 .
PATRICi 31247449. VBIEubVen137708_1781.

Family and domain databases

Gene3Di 2.60.40.10. 1 hit.
3.40.33.10. 1 hit.
InterProi IPR003343. Big_2.
IPR014044. CAP_domain.
IPR003961. Fibronectin_type3.
IPR013783. Ig-like_fold.
IPR008964. Invasin/intimin_cell_adhesion.
IPR026906. LRR_5.
[Graphical view ]
Pfami PF02368. Big_2. 1 hit.
PF00188. CAP. 1 hit.
PF00041. fn3. 1 hit.
PF13306. LRR_5. 2 hits.
[Graphical view ]
SMARTi SM00635. BID_2. 1 hit.
SM00060. FN3. 1 hit.
[Graphical view ]
SUPFAMi SSF49265. SSF49265. 1 hit.
SSF49373. SSF49373. 1 hit.
SSF55797. SSF55797. 1 hit.
PROSITEi PS50853. FN3. 1 hit.
[Graphical view ]
ProtoNeti Search...

Publicationsi

  1. Cited for: NUCLEOTIDE SEQUENCE.
    Strain: ATCC 27560Imported.
  2. "Draft genome sequence of Eubacterium ventriosum (ATCC 27560)."
    Sudarsanam P., Ley R., Guruge J., Turnbaugh P.J., Mahowald M., Liep D., Gordon J.
    Submitted (APR-2007) to the EMBL/GenBank/DDBJ databases
    Cited for: NUCLEOTIDE SEQUENCE.
    Strain: ATCC 27560Imported.
  3. "Crystal structure of a hypothetical leucine rich repeat protein (EUBVEN_01088) from Eubacterium ventriosum ATCC 27560 at 2.50 A resolution (CASP Target)."
    Joint Center for Structural Genomics (JCSG)
    Submitted (SEP-2012) to the PDB data bank
    Cited for: X-RAY CRYSTALLOGRAPHY (2.50 ANGSTROMS) OF 33-410.

Entry informationi

Entry nameiA5Z5V6_9FIRM
AccessioniPrimary (citable) accession number: A5Z5V6
Entry historyi
Integrated into UniProtKB/TrEMBL: July 24, 2007
Last sequence update: July 24, 2007
Last modified: October 1, 2014
This is version 25 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Caution

The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.Imported

Keywords - Technical termi

3D-structureImported

External Data

Dasty 3