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A5WKW0

- A5WKW0_MYCTF

UniProt

A5WKW0 - A5WKW0_MYCTF

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Protein
Submitted name:

ATP dependent DNA ligase LigD

Gene

TBFG_10956

Organism
Mycobacterium tuberculosis (strain F11)
Status
Unreviewed - Annotation score: 1 out of 5- Protein predictedi

Functioni

GO - Molecular functioni

  1. ATP binding Source: InterPro
  2. DNA ligase (ATP) activity Source: InterPro
  3. DNA primase activity Source: InterPro

GO - Biological processi

  1. DNA recombination Source: InterPro
  2. DNA repair Source: InterPro
Complete GO annotation...

Keywords - Molecular functioni

LigaseImported

Enzyme and pathway databases

BioCyciMTUB336982:GH7I-970-MONOMER.

Names & Taxonomyi

Protein namesi
Submitted name:
ATP dependent DNA ligase LigDImported
Submitted name:
Hypothetical ATP dependent DNA ligaseImported
Gene namesi
Ordered Locus Names:TBFG_10956Imported
ORF Names:P426_00976Imported
OrganismiMycobacterium tuberculosis (strain F11)Imported
Taxonomic identifieri336982 [NCBI]
Taxonomic lineageiBacteriaActinobacteriaActinobacteridaeActinomycetalesCorynebacterineaeMycobacteriaceaeMycobacteriumMycobacterium tuberculosis complex
ProteomesiUP000000660: Chromosome

Interactioni

Protein-protein interaction databases

STRINGi336982.TBFG_10956.

Structurei

3D structure databases

ProteinModelPortaliA5WKW0.
SMRiA5WKW0. Positions 2-289, 453-759.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Phylogenomic databases

eggNOGiCOG3285.
HOGENOMiHOG000222509.
KOiK01971.
OMAiSKGIHLY.
OrthoDBiEOG661H49.

Family and domain databases

Gene3Di2.40.50.140. 1 hit.
InterProiIPR012309. DNA_ligase_ATP-dep_C.
IPR012310. DNA_ligase_ATP-dep_cent.
IPR014146. DNA_pol_LigD_ligase_dom.
IPR002755. DNA_primase_S.
IPR014144. LigD_PE_domain.
IPR014145. LigD_pol.
IPR012340. NA-bd_OB-fold.
[Graphical view]
PfamiPF04679. DNA_ligase_A_C. 1 hit.
PF01068. DNA_ligase_A_M. 1 hit.
PF01896. DNA_primase_S. 1 hit.
PF13298. LigD_N. 1 hit.
[Graphical view]
SUPFAMiSSF50249. SSF50249. 1 hit.
TIGRFAMsiTIGR02777. LigD_PE_dom. 1 hit.
TIGR02778. ligD_pol. 1 hit.
TIGR02779. NHEJ_ligase_lig. 1 hit.
PROSITEiPS50160. DNA_LIGASE_A3. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

A5WKW0-1 [UniParc]FASTAAdd to Basket

« Hide

        10         20         30         40         50
MGSASEQRVT LTNADKVLYP ATGTTKSDIF DYYAGVAEVM LGHIAGRPAT
60 70 80 90 100
RKRWPNGVDQ PAFFEKQLAL SAPPWLSRAT VAHRSGTTTY PIIDSATGLA
110 120 130 140 150
WIAQQAALEV HVPQWRFVAE PGSGELNPGP ATRLVFDLDP GEGVMMAQLA
160 170 180 190 200
EVARAVRDLL ADIGLVTFPV TSGSKGLHLY TPLDEPVSSR GATVLAKRVA
210 220 230 240 250
QRLEQAMPAL VTSTMTKSLR AGKVFVDWSQ NSGSKTTIAP YSLRGRTHPT
260 270 280 290 300
VAAPRTWAEL DDPALRQLSY DEVLTRIARD GDLLERLDAD APVADRLTRY
310 320 330 340 350
RRMRDASKTP EPIPTAKPVT GDGNTFVIQE HHARRPHYDF RLERDGVLVS
360 370 380 390 400
WAVPKNLPDN TSVNHLAIHT EDHPLEYATF EGAIPSGEYG AGKVIIWDSG
410 420 430 440 450
TYDTEKFHDD PHTGEVIVNL HGGRISGRYA LIRTNGDRWL AHRLKNQKDQ
460 470 480 490 500
KVFEFDNLAP MLATHGTVAG LKASQWAFEG KWDGYRLLVE ADHGAVRLRS
510 520 530 540 550
RSGRDVTAEY PQLRAFAEDL ADHHVVLDGE AVVLDSSGVP SFSQMQNRGR
560 570 580 590 600
DTRVEFWAFD LLYLDGRALL GTRYQDRRKL LETLANATSL TVPELLPGDG
610 620 630 640 650
AQAFACSRKH GWEGVIAKRR DSRYQPGRRC ASWVKDKHWN TQEVVIGGWR
660 670 680 690 700
AGEGGRSSGV GSLLMGIPGP GGLQFAGRVG TGLSERELAN LKEMLAPLHT
710 720 730 740 750
DESPFDVPLP ARDAKGITYV KPALVAEVRY SEWTPEGRLR QSSWRGLRPD

KKPSEVVRE
Length:759
Mass (Da):83,659
Last modified:July 28, 2009 - v1
Checksum:iDE1B59E33CEE068C
GO

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
CP000717 Genomic DNA. Translation: ABR05299.1.
JLDC01000002 Genomic DNA. Translation: KBJ37862.1.
RefSeqiYP_001286901.1. NC_009565.1.

Genome annotation databases

EnsemblBacteriaiABR05299; ABR05299; TBFG_10956.
GeneIDi5221630.
KEGGimtf:TBFG_10956.
PATRICi18132764. VBIMycTub9078_1045.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
CP000717 Genomic DNA. Translation: ABR05299.1 .
JLDC01000002 Genomic DNA. Translation: KBJ37862.1 .
RefSeqi YP_001286901.1. NC_009565.1.

3D structure databases

ProteinModelPortali A5WKW0.
SMRi A5WKW0. Positions 2-289, 453-759.
ModBasei Search...
MobiDBi Search...

Protein-protein interaction databases

STRINGi 336982.TBFG_10956.

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

EnsemblBacteriai ABR05299 ; ABR05299 ; TBFG_10956 .
GeneIDi 5221630.
KEGGi mtf:TBFG_10956.
PATRICi 18132764. VBIMycTub9078_1045.

Phylogenomic databases

eggNOGi COG3285.
HOGENOMi HOG000222509.
KOi K01971.
OMAi SKGIHLY.
OrthoDBi EOG661H49.

Enzyme and pathway databases

BioCyci MTUB336982:GH7I-970-MONOMER.

Family and domain databases

Gene3Di 2.40.50.140. 1 hit.
InterProi IPR012309. DNA_ligase_ATP-dep_C.
IPR012310. DNA_ligase_ATP-dep_cent.
IPR014146. DNA_pol_LigD_ligase_dom.
IPR002755. DNA_primase_S.
IPR014144. LigD_PE_domain.
IPR014145. LigD_pol.
IPR012340. NA-bd_OB-fold.
[Graphical view ]
Pfami PF04679. DNA_ligase_A_C. 1 hit.
PF01068. DNA_ligase_A_M. 1 hit.
PF01896. DNA_primase_S. 1 hit.
PF13298. LigD_N. 1 hit.
[Graphical view ]
SUPFAMi SSF50249. SSF50249. 1 hit.
TIGRFAMsi TIGR02777. LigD_PE_dom. 1 hit.
TIGR02778. ligD_pol. 1 hit.
TIGR02779. NHEJ_ligase_lig. 1 hit.
PROSITEi PS50160. DNA_LIGASE_A3. 1 hit.
[Graphical view ]
ProtoNeti Search...

Publicationsi

« Hide 'large scale' publications
  1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: F11Imported.
  2. Cited for: NUCLEOTIDE SEQUENCE.
    Strain: F11Imported.
  3. Cited for: NUCLEOTIDE SEQUENCE.
    Strain: F11Imported.

Entry informationi

Entry nameiA5WKW0_MYCTF
AccessioniPrimary (citable) accession number: A5WKW0
Entry historyi
Integrated into UniProtKB/TrEMBL: July 28, 2009
Last sequence update: July 28, 2009
Last modified: October 1, 2014
This is version 35 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteomeImported

External Data

Dasty 3