A5WK76 (A5WK76_MYCTF) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Recommended name:
50S ribosomal protein L16 HAMAP MF_01342 RuleBase RU004414

Gene names

Name:	rplP HAMAP MF_01342
Ordered Locus Names:	TBFG_10722

Organism

Mycobacterium tuberculosis (strain F11) [Complete proteome] [HAMAP]

Taxonomic identifier

336982 [NCBI]

Taxonomic lineage

Bacteria › Actinobacteria › Actinobacteridae › Actinomycetales › Corynebacterineae › Mycobacteriaceae › Mycobacterium › Mycobacterium tuberculosis complex

Protein attributes

Sequence length	138 AA.
Sequence status	Complete.
Protein existence	Inferred from homology

General annotation (Comments)

Function	Binds 23S rRNA and is also seen to make contacts with the A and possibly P site tRNAs By similarity. HAMAP MF_01342 RuleBase RU004414
Subunit structure	Part of the 50S ribosomal subunit By similarity. HAMAP MF_01342
Sequence similarities	Belongs to the ribosomal protein L16P family. HAMAP MF_01342 RuleBase RU004413

Ontologies

Keywords
Ligand	RNA-binding rRNA-binding HAMAP MF_01342 RuleBase RU004414 tRNA-binding HAMAP MF_01342 RuleBase RU004414
Molecular function	Ribonucleoprotein Ribosomal protein HAMAP MF_01342 RuleBase RU004413 EMBL ABR05065.1
Technical term	Complete proteome
Gene Ontology (GO)
Biological process	translation Inferred from electronic annotation. Source: HAMAP
Cellular component	ribosome Inferred from electronic annotation. Source: UniProtKB-KW
Molecular function	rRNA binding Inferred from electronic annotation. Source: HAMAP structural constituent of ribosome Inferred from electronic annotation. Source: InterPro tRNA binding Inferred from electronic annotation. Source: UniProtKB-KW
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	A5WK76 [UniParc]. Last modified July 28, 2009. Version 1. Checksum: 2C878FC597C69D0C	FASTA	138	15,692
	10 20 30 40 50 60 MLIPRKVKHR KQHHPRQRGI ASGGTTVNFG DYGIQALEHA YVTNRQIESA RIAINRHIKR 70 80 90 100 110 120 GGKVWINIFP DRPLTKKPAE TRMGSGKGSP EWWVANVKPG RVLFELSYPN EGVARAALTR 130 AIHKLPIKAR IITREEQF

References

[1]

"The complete genome sequence of Mycobacterium tuberculosis F11." Birren B., Lander E., Galagan J., Devon K., Nusbaum C., Borowsky M.L., Grabherr M., Mauceli E., Brockman W., Young S., LaButti K., Pushparaj V., Sykes S., Baldwin J., Fitzgerald M., Bloom T., Zimmer A., Settipalli S. , Shea T., Arachchi H., Macdonald P., Abouelleil A., Lui A., Priest M., Berlin A., Gearin G., Brown A., Aftuck L., Bessette D., Allen N., Lubonja R., Lokyitsang T., Matthews C., Dunbar C., Benamara M., Nguyen T., Negash T., DeCaprio D., Crawford M., Koehrsen M., Engels R., Montgomery P., Pearson M., Howarth C., Kodira C., Zeng Q., Yandava C., O'Leary S., Alvarado L., Victor T., Murray M. Submitted (APR-2007) to the EMBL/GenBank/DDBJ databases Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].

Cross-references

Sequence databases
EMBL GenBank DDBJ	CP000717 Genomic DNA. Translation: ABR05065.1.
RefSeq	YP_001286667.1. NC_009565.1.
3D structure databases
ProteinModelPortal	A5WK76.
SMR	A5WK76. Positions 1-134.
ModBase	Search...
Protein-protein interaction databases
STRING	A5WK76.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
GeneID	5221390.
GenomeReviews	Gene locus TBFG_10722 in contig CP000717_GR.
KEGG	mtf:TBFG_10722.
PATRIC	18132244. VBIMycTub9078_0791.
Organism-specific databases
CMR	Search...
Phylogenomic databases
OMA	KGSPEFW.
ProtClustDB	PRK09203.
Family and domain databases
HAMAP	MF_01342. Ribosomal_L16. [Tree]
InterPro	IPR016180. Ribosomal_L10e/L16. IPR000114. Ribosomal_L16. IPR020798. Ribosomal_L16_CS. [Graphical view]
KO	K02878.
Pfam	PF00252. Ribosomal_L16. 1 hit. [Graphical view]
PRINTS	PR00060. RIBOSOMALL16.
SUPFAM	SSF54686. Ribosomal_L10e/L16. 1 hit.
TIGRFAMs	TIGR01164. RplP_bact. 1 hit.
PROSITE	PS00586. RIBOSOMAL_L16_1. 1 hit. PS00701. RIBOSOMAL_L16_2. 1 hit. [Graphical view]
ProtoNet	Search...

Entry information

Entry name

A5WK76_MYCTF

Accession

Primary (citable) accession number: A5WK76

Entry history

Integrated into UniProtKB/TrEMBL:	July 28, 2009
Last sequence update:	July 28, 2009
Last modified:	December 14, 2011
This is version 20 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)