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Protein
Submitted name:

Fumarate lyase

Gene

PsycPRwf_1545

Organism
Psychrobacter sp. (strain PRwf-1)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Protein predictedi

Functioni

GO - Molecular functioni

GO - Biological processi

Complete GO annotation...

Keywords - Molecular functioni

LyaseSAAS annotationImported

Enzyme and pathway databases

BioCyciPPRW349106:GHZF-1570-MONOMER.

Names & Taxonomyi

Protein namesi
Submitted name:
Fumarate lyaseImported
Gene namesi
Ordered Locus Names:PsycPRwf_1545Imported
OrganismiPsychrobacter sp. (strain PRwf-1)Imported
Taxonomic identifieri349106 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaGammaproteobacteriaPseudomonadalesMoraxellaceaePsychrobacter
Proteomesi
  • UP000001993 Componenti: Chromosome

Interactioni

Protein-protein interaction databases

STRINGi349106.PsycPRwf_1545.

Structurei

3D structure databases

ProteinModelPortaliA5WFP5.
SMRiA5WFP5. Positions 1-457.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Domaini14 – 344331Lyase_1InterPro annotationAdd
BLAST
Domaini410 – 46253FumaraseC_CInterPro annotationAdd
BLAST

Phylogenomic databases

eggNOGiENOG4108IJ0. Bacteria.
COG1027. LUCA.
HOGENOMiHOG000061737.
KOiK01744.
OMAiEICENYV.
OrthoDBiEOG6V1M4M.

Family and domain databases

Gene3Di1.10.275.10. 1 hit.
InterProiIPR024083. Fumarase/histidase_N.
IPR018951. Fumarase_C_C.
IPR020557. Fumarate_lyase_CS.
IPR000362. Fumarate_lyase_fam.
IPR022761. Fumarate_lyase_N.
IPR008948. L-Aspartase-like.
[Graphical view]
PANTHERiPTHR11444. PTHR11444. 1 hit.
PfamiPF10415. FumaraseC_C. 1 hit.
PF00206. Lyase_1. 1 hit.
[Graphical view]
PRINTSiPR00149. FUMRATELYASE.
SUPFAMiSSF48557. SSF48557. 1 hit.
PROSITEiPS00163. FUMARATE_LYASES. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

A5WFP5-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MTVSTRQESD LLGNRDIPAD AYYGIQTLRA FENFPISGVR LHQFAPFIRA
60 70 80 90 100
FATVKKAAAI TNHKVGVLDE KIKDAICAAC DDLIADKYHD QFIIDMFQGG
110 120 130 140 150
AGTSTNMNVN EVIANRALEI MGHNKGEYQY LHPNNHVNLS QSTNDSYPTA
160 170 180 190 200
LKLALDHYCE RLLGKMDILL ESFLNKKQAL GDRLKMGRTH LQDAVPMTAG
210 220 230 240 250
QEFNAFATMI KAEKKRIEQV RELLYEINMG ATAIGTGINA PSNYPETCAE
260 270 280 290 300
VLRQLTGKPY YTSDDLVQAT QDTSVYVALS GNLRLLATRL SKIANDIRLQ
310 320 330 340 350
SSGPRAGLGQ YRIPQMQPGS SIMPGKVNPV IPEVVNQACF HVMGIDHTIA
360 370 380 390 400
MASEAGQLQL NVFEPVMAFN LFTGLSMMGN ICETFATRCI DGIEMNEDYC
410 420 430 440 450
RQQVLSNIGL VTALNPHLGY EVSTRIAKKA QESGGSVYNI VLEEKLLDQS
460 470
TLDEIISPEN MVYPLLKNKA
Length:470
Mass (Da):51,891
Last modified:July 10, 2007 - v1
Checksum:i956C8E18195CD742
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP000713 Genomic DNA. Translation: ABQ94486.1.
RefSeqiWP_011960767.1. NC_009524.1.

Genome annotation databases

EnsemblBacteriaiABQ94486; ABQ94486; PsycPRwf_1545.
KEGGiprw:PsycPRwf_1545.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP000713 Genomic DNA. Translation: ABQ94486.1.
RefSeqiWP_011960767.1. NC_009524.1.

3D structure databases

ProteinModelPortaliA5WFP5.
SMRiA5WFP5. Positions 1-457.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi349106.PsycPRwf_1545.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiABQ94486; ABQ94486; PsycPRwf_1545.
KEGGiprw:PsycPRwf_1545.

Phylogenomic databases

eggNOGiENOG4108IJ0. Bacteria.
COG1027. LUCA.
HOGENOMiHOG000061737.
KOiK01744.
OMAiEICENYV.
OrthoDBiEOG6V1M4M.

Enzyme and pathway databases

BioCyciPPRW349106:GHZF-1570-MONOMER.

Family and domain databases

Gene3Di1.10.275.10. 1 hit.
InterProiIPR024083. Fumarase/histidase_N.
IPR018951. Fumarase_C_C.
IPR020557. Fumarate_lyase_CS.
IPR000362. Fumarate_lyase_fam.
IPR022761. Fumarate_lyase_N.
IPR008948. L-Aspartase-like.
[Graphical view]
PANTHERiPTHR11444. PTHR11444. 1 hit.
PfamiPF10415. FumaraseC_C. 1 hit.
PF00206. Lyase_1. 1 hit.
[Graphical view]
PRINTSiPR00149. FUMRATELYASE.
SUPFAMiSSF48557. SSF48557. 1 hit.
PROSITEiPS00163. FUMARATE_LYASES. 1 hit.
[Graphical view]
ProtoNetiSearch...

Publicationsi

  1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: PRwf-1Imported.

Entry informationi

Entry nameiA5WFP5_PSYWF
AccessioniPrimary (citable) accession number: A5WFP5
Entry historyi
Integrated into UniProtKB/TrEMBL: July 10, 2007
Last sequence update: July 10, 2007
Last modified: March 16, 2016
This is version 52 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.