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A5WDS3 (A5WDS3_PSYWF) Unreviewed, UniProtKB/TrEMBL

Last modified November 13, 2013. Version 38. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein names
Gene names
Ordered Locus Names:PsycPRwf_0862 EMBL ABQ93814.1
OrganismPsychrobacter sp. (strain PRwf-1) [Complete proteome] [HAMAP] EMBL ABQ93814.1
Taxonomic identifier349106 [NCBI]
Taxonomic lineageBacteriaProteobacteriaGammaproteobacteriaPseudomonadalesMoraxellaceaePsychrobacter

Protein attributes

Sequence length554 AA.
Sequence statusComplete.
Protein existencePredicted

Ontologies

Keywords
   Molecular functionLigase EMBL ABQ93814.1
   Technical termComplete proteome
Gene Ontology (GO)
   Molecular_functionligase activity

Inferred from electronic annotation. Source: UniProtKB-KW

Complete GO annotation...

Sequences

Sequence LengthMass (Da)Tools
A5WDS3 [UniParc].

Last modified July 10, 2007. Version 1.
Checksum: 33DEDDDED66E5799

FASTA55461,420
        10         20         30         40         50         60 
MSLTTPTSLN SISYAEFYQQ FDQQDLLKQI FQDHPEDALN AYLACCGRHV RNGLGDKVAL 

        70         80         90        100        110        120 
VHEDTKQKIT QLSFNELDQR SAQVANLLKA YGVKAGDRVA TMLPRTPELL IVVLATWRVG 

       130        140        150        160        170        180 
AIYQPLFTAF GVESIAYRLD KADTKVVFTN LDNRSKFDEI ENLPTMVLIE AQAAADASGY 

       190        200        210        220        230        240 
SDDIFSKAEQ YSEVCEPVLL TPDAPFLQMF TSGTVGKSKG VSVPLAALPT FYLYMRYAID 

       250        260        270        280        290        300 
LQQTDHYWNM ADPGWAYGLY YAITGPLLMG ITTYFNEMGF DAQNTLDFLV RHKISNIASS 

       310        320        330        340        350        360 
PTAFRMMKSS GVFEGVADQL SLRVANSAGE TLNTEVVGWV SENLGCKVCD QYGQTETGMT 

       370        380        390        400        410        420 
CCMHHALQHE APTGSMGMPL PGHKLVVLDA DMQLVEDGVQ GQLAVVVSQS PAFYFNGYSW 

       430        440        450        460        470        480 
NEKQAFFDDY YLTGDVVERH QDGTFWFAGR DDDIIITAGY RIGPTDVENC VMEHEAVAES 

       490        500        510        520        530        540 
AAVGVPDETR GHVIKSYVVL KEGIDGSEDL VNQIKSLVQK RLSAHAYPRY VEFVTALPKT 

       550 
PSGKIQRFLL RQSN 

« Hide

References

[1]"Complete sequence of chromosome of Psychrobacter sp. PRwf-1."
US DOE Joint Genome Institute
Copeland A., Lucas S., Lapidus A., Barry K., Detter J.C., Glavina del Rio T., Hammon N., Israni S., Dalin E., Tice H., Pitluck S., Chain P., Malfatti S., Shin M., Vergez L., Schmutz J., Larimer F., Land M. expand/collapse author list , Hauser L., Kyrpides N., Kim E., Tiedje J., Richardson P.
Submitted (MAY-2007) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: PRwf-1 EMBL ABQ93814.1.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
CP000713 Genomic DNA. Translation: ABQ93814.1.
RefSeqYP_001279764.1. NC_009524.1.

3D structure databases

ProteinModelPortalA5WDS3.
ModBaseSearch...
MobiDBSearch...

Protein-protein interaction databases

STRING349106.PsycPRwf_0862.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaABQ93814; ABQ93814; PsycPRwf_0862.
GeneID5205211.
KEGGprw:PsycPRwf_0862.

Organism-specific databases

CMRSearch...

Phylogenomic databases

eggNOGCOG0365.
HOGENOMHOG000229982.
KOK01895.
OMAQFASEEH.
OrthoDBEOG68WR2H.
ProtClustDBCLSK839082.

Enzyme and pathway databases

BioCycPPRW349106:GHZF-881-MONOMER.

Family and domain databases

InterProIPR025110. AMP-bd_C.
IPR000873. AMP-dep_Synth/Lig.
[Graphical view]
PfamPF00501. AMP-binding. 1 hit.
PF13193. AMP-binding_C. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameA5WDS3_PSYWF
AccessionPrimary (citable) accession number: A5WDS3
Entry history
Integrated into UniProtKB/TrEMBL: July 10, 2007
Last sequence update: July 10, 2007
Last modified: November 13, 2013
This is version 38 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)