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A5WBP3 (A5WBP3_PSYWF) Unreviewed, UniProtKB/TrEMBL

Last modified May 1, 2013. Version 30. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein namesSubmitted name:
Type II site-specific deoxyribonuclease EMBL ABQ93084.1
EC=3.1.21.4 EMBL ABQ93084.1
Gene names
Ordered Locus Names:PsycPRwf_0124 EMBL ABQ93084.1
OrganismPsychrobacter sp. (strain PRwf-1) [Complete proteome] [HAMAP] EMBL ABQ93084.1
Taxonomic identifier349106 [NCBI]
Taxonomic lineageBacteria › Proteobacteria › Gammaproteobacteria › Pseudomonadales › Moraxellaceae › Psychrobacter

Protein attributes

Sequence length254 AA.
Sequence statusComplete.
Protein existencePredicted

Ontologies

Keywords
   Molecular functionHydrolase EMBL ABQ93084.1
   Technical termComplete proteome
Gene Ontology (GO)
   Molecular_functionType II site-specific deoxyribonuclease activity

Inferred from electronic annotation. Source: EC

Complete GO annotation...

Sequences

Sequence LengthMass (Da)Tools
A5WBP3 [UniParc].

Last modified July 10, 2007. Version 1.
Checksum: CCAD7A4CBA6373BC

FASTA25429,455
        10         20         30         40         50         60 
MDLQFNQQLA KGYKSKSQII RVLSEGWVAH QGYCPNCGNN RLSGFANNQP VADFYCPQCH 

        70         80         90        100        110        120 
EQYELKSKKA KLSHVINDGA YATMIERIKS DDNPNFFFLT YSDELVVNNF LIIPKHFFTT 

       130        140        150        160        170        180 
DMIIKRPPLP PTARRAGWIG CNINLKKVPE IGKVFLVKNQ QPVATEQVTE QFQKSLFLRQ 

       190        200        210        220        230        240 
QKQQSRGWTL EIMSCVDKLP PQFSLNDIYQ FSNYLRTRYP NNNNIEAKIR QQLQILRDKG 

       250 
LLQFLGNGRY RKIG

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References

[1]"Complete sequence of chromosome of Psychrobacter sp. PRwf-1."
US DOE Joint Genome Institute
Copeland A., Lucas S., Lapidus A., Barry K., Detter J.C., Glavina del Rio T., Hammon N., Israni S., Dalin E., Tice H., Pitluck S., Chain P., Malfatti S., Shin M., Vergez L., Schmutz J., Larimer F., Land M. expand/collapse author list , Hauser L., Kyrpides N., Kim E., Tiedje J., Richardson P.
Submitted (MAY-2007) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: PRwf-1 EMBL ABQ93084.1.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ		CP000713 Genomic DNA. Translation: ABQ93084.1.
RefSeqYP_001279034.1. NC_009524.1.

3D structure databases

ModBaseSearch...

Protein-protein interaction databases

STRING349106.PsycPRwf_0124.

Protein family/group databases

REBASE15634. PspPRORF124P.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaABQ93084; ABQ93084; PsycPRwf_0124.
GeneID5205293.
KEGGprw:PsycPRwf_0124.

Organism-specific databases

CMRSearch...

Phylogenomic databases

eggNOGNOG11693.
HOGENOMHOG000067092.
KOK01155.
OMAHHIMCSI.
ProtClustDBCLSK878276.

Enzyme and pathway databases

BioCycPPRW349106:GHZF-199-MONOMER.

Family and domain databases

InterProIPR010324. DRP.
[Graphical view]
PfamPF06044. DRP. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameA5WBP3_PSYWF
AccessionPrimary (citable) accession number: A5WBP3
Entry history
Integrated into UniProtKB/TrEMBL: July 10, 2007
Last sequence update: July 10, 2007
Last modified: May 1, 2013
This is version 30 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)
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