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Protein
Submitted name:

Type II site-specific deoxyribonuclease

Gene

PsycPRwf_0124

Organism
Psychrobacter sp. (strain PRwf-1)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Protein predictedi

Functioni

GO - Molecular functioni

Complete GO annotation...

Keywords - Molecular functioni

HydrolaseImported

Enzyme and pathway databases

BioCyciPPRW349106:GHZF-125-MONOMER.

Protein family/group databases

REBASEi15634. PspPRORF124P.

Names & Taxonomyi

Protein namesi
Submitted name:
Type II site-specific deoxyribonucleaseImported (EC:3.1.21.4Imported)
Gene namesi
Ordered Locus Names:PsycPRwf_0124Imported
OrganismiPsychrobacter sp. (strain PRwf-1)Imported
Taxonomic identifieri349106 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaGammaproteobacteriaPseudomonadalesMoraxellaceaePsychrobacter
ProteomesiUP000001993 Componenti: Chromosome

Interactioni

Protein-protein interaction databases

STRINGi349106.PsycPRwf_0124.

Family & Domainsi

Phylogenomic databases

eggNOGiNOG11693.
HOGENOMiHOG000067092.
KOiK01155.
OMAiHHIMCSI.
OrthoDBiEOG67Q982.

Family and domain databases

InterProiIPR010324. DRP.
[Graphical view]
PfamiPF06044. DRP. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

A5WBP3-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MDLQFNQQLA KGYKSKSQII RVLSEGWVAH QGYCPNCGNN RLSGFANNQP
60 70 80 90 100
VADFYCPQCH EQYELKSKKA KLSHVINDGA YATMIERIKS DDNPNFFFLT
110 120 130 140 150
YSDELVVNNF LIIPKHFFTT DMIIKRPPLP PTARRAGWIG CNINLKKVPE
160 170 180 190 200
IGKVFLVKNQ QPVATEQVTE QFQKSLFLRQ QKQQSRGWTL EIMSCVDKLP
210 220 230 240 250
PQFSLNDIYQ FSNYLRTRYP NNNNIEAKIR QQLQILRDKG LLQFLGNGRY

RKIG
Length:254
Mass (Da):29,455
Last modified:July 10, 2007 - v1
Checksum:iCCAD7A4CBA6373BC
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP000713 Genomic DNA. Translation: ABQ93084.1.
RefSeqiWP_011959420.1. NC_009524.1.
YP_001279034.1. NC_009524.1.

Genome annotation databases

EnsemblBacteriaiABQ93084; ABQ93084; PsycPRwf_0124.
KEGGiprw:PsycPRwf_0124.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP000713 Genomic DNA. Translation: ABQ93084.1.
RefSeqiWP_011959420.1. NC_009524.1.
YP_001279034.1. NC_009524.1.

3D structure databases

ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi349106.PsycPRwf_0124.

Protein family/group databases

REBASEi15634. PspPRORF124P.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiABQ93084; ABQ93084; PsycPRwf_0124.
KEGGiprw:PsycPRwf_0124.

Phylogenomic databases

eggNOGiNOG11693.
HOGENOMiHOG000067092.
KOiK01155.
OMAiHHIMCSI.
OrthoDBiEOG67Q982.

Enzyme and pathway databases

BioCyciPPRW349106:GHZF-125-MONOMER.

Family and domain databases

InterProiIPR010324. DRP.
[Graphical view]
PfamiPF06044. DRP. 1 hit.
[Graphical view]
ProtoNetiSearch...

Publicationsi

  1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: PRwf-1Imported.

Entry informationi

Entry nameiA5WBP3_PSYWF
AccessioniPrimary (citable) accession number: A5WBP3
Entry historyi
Integrated into UniProtKB/TrEMBL: July 10, 2007
Last sequence update: July 10, 2007
Last modified: April 1, 2015
This is version 40 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported

External Data

Dasty 3

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into Uniref entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.