Skip Header

You are using a version of Internet Explorer that may not display all features of this website. Please upgrade to a modern browser.
Contribute Send feedback
Read comments (?) or add your own

A5W1G5 (A5W1G5_PSEP1) Unreviewed, UniProtKB/TrEMBL

Last modified November 13, 2013. Version 46. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
to top of pageNames·Attributes·General annotation·Ontologies·Sequences·References·Cross-refs·Entry infoCustomize order

Names and origin

Protein namesRecommended name:
Isocitrate dehydrogenase [NADP] RuleBase RU004446

EC=1.1.1.42 RuleBase RU004446
Gene names
Ordered Locus Names:Pput_1822 EMBL ABQ77975.1
OrganismPseudomonas putida (strain F1 / ATCC 700007) [Complete proteome] [HAMAP] EMBL ABQ77975.1
Taxonomic identifier351746 [NCBI]
Taxonomic lineageBacteriaProteobacteriaGammaproteobacteriaPseudomonadalesPseudomonadaceaePseudomonas

Protein attributes

Sequence length418 AA.
Sequence statusComplete.
Protein existenceInferred from homology

General annotation (Comments)

Catalytic activity

Isocitrate + NADP+ = 2-oxoglutarate + CO2 + NADPH. RuleBase RU004446

Cofactor

Binds 1 magnesium or manganese ion per subunit By similarity. RuleBase RU004446

Sequence similarities

Belongs to the isocitrate and isopropylmalate dehydrogenases family. RuleBase RU004443

Sequences

Sequence LengthMass (Da)Tools
A5W1G5 [UniParc].

Last modified July 10, 2007. Version 1.
Checksum: 81779C112CE46E4C

FASTA41845,705
        10         20         30         40         50         60 
MGYQKIKVPT DGTKITVNAD HSLNVPDHPI IPYIEGDGIG VDVSPVMIKV VDAAVHKAYG 

        70         80         90        100        110        120 
GKRKIAWMEV YAGEKATQVY DQDTWLPQET LDAVRDYVVS IKGPLTTPVG GGIRSLNVAL 

       130        140        150        160        170        180 
RQQLDLYVCL RPVLWFQGVP SPVKKPGDVD MVIFRENSED IYAGIEWKAG SPEANKVIKF 

       190        200        210        220        230        240 
LKEEMGVTKI RFDQDCGIGV KPVSKEGTKR LVRKALQYVV DNDRESLTLV HKGNIMKFTE 

       250        260        270        280        290        300 
GAFKDWGYEV ARDEFGAELL DGGPWMKFKN PKTGREVIVK DAIADAMLQQ ILLRPAEYDV 

       310        320        330        340        350        360 
IATLNLNGDY LSDALAAEVG GIGIAPGANL SDTVAMFEAT HGTAPKYAGQ DKVNPGSVIL 

       370        380        390        400        410 
SAEMMLRHMG WTEAADLIIK GTNGAIAAKT VTYDFERLME GAKLVSSSGF GDEMIKHM 

« Hide

References

[1]"Complete sequence of Pseudomonas putida F1."
US DOE Joint Genome Institute
Copeland A., Lucas S., Lapidus A., Barry K., Detter J.C., Glavina del Rio T., Hammon N., Israni S., Dalin E., Tice H., Pitluck S., Chain P., Malfatti S., Shin M., Vergez L., Schmutz J., Larimer F., Land M. expand/collapse author list , Hauser L., Kyrpides N., Lykidis A., Parales R., Richardson P.
Submitted (MAY-2007) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: F1 / ATCC 700007.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
CP000712 Genomic DNA. Translation: ABQ77975.1.
RefSeqYP_001267159.1. NC_009512.1.

3D structure databases

ProteinModelPortalA5W1G5.
SMRA5W1G5. Positions 5-418.
ModBaseSearch...
MobiDBSearch...

Protein-protein interaction databases

STRING351746.Pput_1822.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaABQ77975; ABQ77975; Pput_1822.
GeneID5194350.
KEGGppf:Pput_1822.
PATRIC19919740. VBIPsePut56420_1855.

Organism-specific databases

CMRSearch...

Phylogenomic databases

eggNOGCOG0538.
HOGENOMHOG000021113.
KOK00031.
OMAFRDWGYE.
OrthoDBEOG6SNDTP.
ProtClustDBCLSK867410.

Enzyme and pathway databases

BioCycPPUT351746:GI26-1868-MONOMER.

Family and domain databases

Gene3D3.40.718.10. 1 hit.
InterProIPR019818. IsoCit/isopropylmalate_DH_CS.
IPR001804. Isocitrate/isopropylmalate_DH.
IPR004439. Isocitrate_DH_NADP_dimer_prok.
IPR024084. IsoPropMal-DH-like_dom.
[Graphical view]
PANTHERPTHR11835. PTHR11835. 1 hit.
PfamPF00180. Iso_dh. 1 hit.
[Graphical view]
TIGRFAMsTIGR00183. prok_nadp_idh. 1 hit.
PROSITEPS00470. IDH_IMDH. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameA5W1G5_PSEP1
AccessionPrimary (citable) accession number: A5W1G5
Entry history
Integrated into UniProtKB/TrEMBL: July 10, 2007
Last sequence update: July 10, 2007
Last modified: November 13, 2013
This is version 46 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)