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A5W1G4 (A5W1G4_PSEP1) Unreviewed, UniProtKB/TrEMBL

Last modified May 29, 2013. Version 39. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein namesSubmitted name:
Isocitrate dehydrogenase, NADP-dependent EMBL ABQ77974.1
EC=1.1.1.42 EMBL ABQ77974.1
Gene names
Ordered Locus Names:Pput_1821 EMBL ABQ77974.1
OrganismPseudomonas putida (strain F1 / ATCC 700007) [Complete proteome] [HAMAP] EMBL ABQ77974.1
Taxonomic identifier351746 [NCBI]
Taxonomic lineageBacteria › Proteobacteria › Gammaproteobacteria › Pseudomonadales › Pseudomonadaceae › Pseudomonas ›

Protein attributes

Sequence length767 AA.
Sequence statusComplete.
Protein existenceInferred from homology

General annotation (Comments)

Cofactor

Binds 1 magnesium or manganese ion per subunit By similarity. PIRSR PIRSR009407-3

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Regions

Region159 – 1668Substrate binding By similarity PIRSR PIRSR009407-2

Sites

Metal binding3771Magnesium or manganese By similarity PIRSR PIRSR009407-3
Metal binding5751Magnesium or manganese By similarity PIRSR PIRSR009407-3
Metal binding5791Magnesium or manganese By similarity PIRSR PIRSR009407-3
Binding site1721Substrate By similarity PIRSR PIRSR009407-2
Binding site5741Substrate By similarity PIRSR PIRSR009407-2
Site2821Critical for catalysis By similarity PIRSR PIRSR009407-1
Site4471Critical for catalysis By similarity PIRSR PIRSR009407-1

Sequences

Sequence LengthMass (Da)Tools
A5W1G4 [UniParc].

Last modified July 10, 2007. Version 1.
Checksum: D2CDC55367A77E4A

FASTA76782,873
        10         20         30         40         50         60 
MALPGRCAYP AHHETRARSA HRELTRMPTR SKIIYTFTDE APALATYSLL PIIEAFTASA 

        70         80         90        100        110        120 
DIAVETRDIS LAGRILAAFP EQLGAEKQVG DHLAELGQLA TTPEANIIKL PNISASVPQL 

       130        140        150        160        170        180 
KAAIKELQGK GFNIPDYADE PATAEEKESR ARYDRIKGSA VNPVLREGNS DRRAPLSVKN 

       190        200        210        220        230        240 
YARKHPHKMG AWAADSKSHV AHMTQGDFYG SEKAALIEAD DSLRIELVAK DGSTTVLKEK 

       250        260        270        280        290        300 
TAVKAAEVID CATMSRKALK AFIAEQIADA KAAGVLLSVH LKATMMKVSD PIMFGVIVEE 

       310        320        330        340        350        360 
FYNDVLTKHA AALAEVGFNA NNGIGDLYAR IKDLPADKQA EIEADIQALY AERPALAMVN 

       370        380        390        400        410        420 
SDKGITNLHV PSDVIVDASM PAMIRDSGKM WNTAGELQDA KAVIPDRCYA GIYQATIEDC 

       430        440        450        460        470        480 
KVNGAFDPTT MGSVPNVGLM AQKAEEYGSH DKTFQVKADG VVRVVDGKGN VVLEQNVEAG 

       490        500        510        520        530        540 
DIFRMCQTKD APIQDWVKLA VNRARLSNTP AVFWLDPARA HDGVMIEKVQ KYLKDHDTTG 

       550        560        570        580        590        600 
LDIRILAPVD AIKFSLARIR EGKDTISVTG NVLRDYLTDL FPIMELGTSA KMLSIVPLMS 

       610        620        630        640        650        660 
GGGLFETGAG GSAPKHVQQL VEENFLRWDS LGEFLALAAS LEHLGNTYDN PRAKVLANTL 

       670        680        690        700        710        720 
DQATGKFLDT NKSPSRKVGG IDNRGSHFYL TLYWAEALAA QTDDAALQAR FAPLAKTLAE 

       730        740        750        760 
NEATIVAELN AVQGKPADIG GYYAPDAELT AKVMRPSQTL NSAIAAL

« Hide

References

[1]"Complete sequence of Pseudomonas putida F1."
US DOE Joint Genome Institute
Copeland A., Lucas S., Lapidus A., Barry K., Detter J.C., Glavina del Rio T., Hammon N., Israni S., Dalin E., Tice H., Pitluck S., Chain P., Malfatti S., Shin M., Vergez L., Schmutz J., Larimer F., Land M. expand/collapse author list , Hauser L., Kyrpides N., Lykidis A., Parales R., Richardson P.
Submitted (MAY-2007) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: F1 / ATCC 700007.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ		CP000712 Genomic DNA. Translation: ABQ77974.1.
RefSeqYP_001267158.1. NC_009512.1.

3D structure databases

ProteinModelPortalA5W1G4.
SMRA5W1G4. Positions 32-767.
ModBaseSearch...

Protein-protein interaction databases

STRING351746.Pput_1821.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaABQ77974; ABQ77974; Pput_1821.
GeneID5194090.
KEGGppf:Pput_1821.
PATRIC19919738. VBIPsePut56420_1854.

Organism-specific databases

CMRSearch...

Phylogenomic databases

eggNOGCOG2838.
HOGENOMHOG000240860.
KOK00031.
OMAFRMCQTK.
ProtClustDBCLSK867411.

Enzyme and pathway databases

BioCycPPUT351746:GI26-1867-MONOMER.

Family and domain databases

Gene3D3.40.718.10. 3 hits.
InterProIPR004436. Isocitrate_DH_NADP_mono.
IPR024084. IsoPropMal-DH-like_dom.
[Graphical view]
PfamPF03971. IDH. 1 hit.
[Graphical view]
PIRSFPIRSF009407. IDH_monmr. 1 hit.
TIGRFAMsTIGR00178. monomer_idh. 1 hit.
ProtoNetSearch...

Entry information

Entry nameA5W1G4_PSEP1
AccessionPrimary (citable) accession number: A5W1G4
Entry history
Integrated into UniProtKB/TrEMBL: July 10, 2007
Last sequence update: July 10, 2007
Last modified: May 29, 2013
This is version 39 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)
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