A5W1D6 (A5W1D6_PSEP1) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Recommended name:
Glycogen synthase HAMAP MF_00484
EC=2.4.1.21 HAMAP MF_00484

Alternative name(s):
Starch [bacterial glycogen] synthase HAMAP MF_00484

Gene names

Name:	glgA HAMAP MF_00484
Ordered Locus Names:	Pput_1793

Organism

Pseudomonas putida (strain F1 / ATCC 700007) [Complete proteome] [HAMAP] EMBL ABQ77946.1

Taxonomic identifier

351746 [NCBI]

Taxonomic lineage

Bacteria › Proteobacteria › Gammaproteobacteria › Pseudomonadales › Pseudomonadaceae › Pseudomonas

Protein attributes

Sequence length	519 AA.
Sequence status	Complete.
Protein existence	Inferred from homology

General annotation (Comments)

Function	Synthesizes alpha-1,4-glucan chains using ADP-glucose By similarity. HAMAP MF_00484 SAAS SAAS011835
Catalytic activity	ADP-glucose + (1,4-alpha-D-glucosyl)(n) = ADP + (1,4-alpha-D-glucosyl)(n+1). HAMAP MF_00484
Pathway	Glycan biosynthesis; glycogen biosynthesis. HAMAP MF_00484 SAAS SAAS011835
Sequence similarities	Belongs to the glycosyltransferase 1 family. Bacterial/plant glycogen synthase subfamily. HAMAP MF_00484

Ontologies

Keywords
Biological process	Glycogen biosynthesis HAMAP MF_00484 SAAS SAAS011835
Molecular function	Glycosyltransferase HAMAP MF_00484 SAAS SAAS011835 Transferase
Technical term	Complete proteome
Gene Ontology (GO)
Biological process	glycogen biosynthetic process Inferred from electronic annotation. Source: HAMAP
Molecular function	starch synthase activity Inferred from electronic annotation. Source: HAMAP
Complete GO annotation...

Sequence annotation (Features)

	Feature key	Position(s)	Length	Description	Graphical view	Feature identifier
Sites
	Binding site	57	1	ADP-glucose By similarity HAMAP MF_00484

Sequences

	Sequence		Length	Mass (Da)
	A5W1D6 [UniParc]. Last modified July 10, 2007. Version 1. Checksum: B8942752786445F2	FASTA	519	57,185
	10 20 30 40 50 60 MISAAVEPHV DAFKPDNREP LTPDFATTGK APGAQRQQNP NMRKILFVTS EIADLVKTGG 70 80 90 100 110 120 LGDVSAALPR ALAHLHDVRV LIPGYRQVME SDNPIHIVGE LGGHAALPPC KIGRMDMADG 130 140 150 160 170 180 LVIYVLICPE LYQRDGTPYG ANNGRDWPDN HIRFARLGLA AAEIAAGEGK IHWTPEVVHA 190 200 210 220 230 240 HDWPAGLAPA YMHWRGLNTP TLFTIHNLAY QGVYSRGCSP ELAIPEHAMQ QEGMEFYGKL 250 260 270 280 290 300 SFLKAGLAYS SHITTVSATY AREITTPEFG CGLDGFLASK AQQGLLGGIP NGIDESWDSA 310 320 330 340 350 360 TDKHLQHNFS INDWEGKARN TQEVRELFGL DDSEGPLFAV VSRLVYQKGL DLTLGVADYI 370 380 390 400 410 420 VEQGGQIAII GRGEPEEEQA MRELALRHPG RIGVRIGFNE TDARRMFAGS DFLLMPSRYE 430 440 450 460 470 480 PCGLSQMYAQ RFGSLPVARN TGGLADTIEC GVTGFLFNES TVESYREALS RAFYVYGKKD 490 500 510 LLNAMRCLSM TQPFNWCQAV EPYARLYEDL VKQTQLSHY

References

[1]

"Complete sequence of Pseudomonas putida F1." Copeland A., Lucas S., Lapidus A., Barry K., Detter J.C., Glavina del Rio T., Hammon N., Israni S., Dalin E., Tice H., Pitluck S., Chain P., Malfatti S., Shin M., Vergez L., Schmutz J., Larimer F., Land M. , Hauser L., Kyrpides N., Lykidis A., Parales R., Richardson P. Submitted (MAY-2007) to the EMBL/GenBank/DDBJ databases Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: F1 / ATCC 700007.

Cross-references

Sequence databases
EMBL GenBank DDBJ	CP000712 Genomic DNA. Translation: ABQ77946.1.
RefSeq	YP_001267130.1. NC_009512.1.
3D structure databases
ProteinModelPortal	A5W1D6.
ModBase	Search...
Protein-protein interaction databases
STRING	A5W1D6.
Protein family/group databases
CAZy	GT5. Glycosyltransferase Family 5.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
GeneID	5193906.
GenomeReviews	Gene locus Pput_1793 in contig CP000712_GR.
KEGG	ppf:Pput_1793.
PATRIC	19919681. VBIPsePut56420_1826.
Organism-specific databases
CMR	Search...
Phylogenomic databases
eggNOG	COG0297.
HOGENOM	HBG596384.
OMA	HAHDWPA.
ProtClustDB	PRK00654.
Enzyme and pathway databases
BioCyc	PPUT351746:PPUT_1793-MONOMER.
Family and domain databases
HAMAP	MF_00484. Glycogen_synth. [Tree]
InterPro	IPR001296. Glyco_trans_1. IPR011835. Glycogen/starch_synth. IPR013534. Starch_synth_cat_dom. [Graphical view]
KO	K00703.
Pfam	PF08323. Glyco_transf_5. 1 hit. PF00534. Glycos_transf_1. 1 hit. [Graphical view]
TIGRFAMs	TIGR02095. GlgA. 1 hit.
ProtoNet	Search...

Entry information

Entry name

A5W1D6_PSEP1

Accession

Primary (citable) accession number: A5W1D6

Entry history

Integrated into UniProtKB/TrEMBL:	July 10, 2007
Last sequence update:	July 10, 2007
Last modified:	December 14, 2011
This is version 34 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)