A5W166 (A5W166_PSEP1) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
MLTD_N domain protein EMBL ABQ77876.1

Gene names

Ordered Locus Names:

Pput_1720

Organism

Pseudomonas putida (strain F1 / ATCC 700007) [Complete proteome] [HAMAP] EMBL ABQ77876.1

Taxonomic identifier

351746 [NCBI]

Taxonomic lineage

Bacteria › Proteobacteria › Gammaproteobacteria › Pseudomonadales › Pseudomonadaceae › Pseudomonas

Protein attributes

Sequence length	476 AA.
Sequence status	Complete.
Sequence processing	The displayed sequence is further processed into a mature form.
Protein existence	Predicted

Ontologies

Keywords
Domain	Signal EMBL ABQ77876.1
Technical term	Complete proteome
Gene Ontology (GO)
Biological process	cell wall macromolecule catabolic process Inferred from electronic annotation. Source: InterPro peptidoglycan metabolic process Inferred from electronic annotation. Source: InterPro
Cellular component	membrane Inferred from electronic annotation. Source: InterPro
Molecular function	lytic transglycosylase activity Inferred from electronic annotation. Source: InterPro
Complete GO annotation...

Sequence annotation (Features)

	Feature key	Position(s)	Length	Description	Graphical view	Feature identifier
Molecule processing
	Signal peptide	1 – 27	27	Potential EMBL ABQ77876.1
	Chain	28 – 476	449	Potential EMBL ABQ77876.1		PRO_5000251865

Sequences

	Sequence		Length	Mass (Da)
	A5W166 [UniParc]. Last modified July 10, 2007. Version 1. Checksum: E40FC97D53336AC8	FASTA	476	52,879
	10 20 30 40 50 60 MSSRSRRTSH SVALTRLAQI SALALAATLV GCQSTRQLDE SDSVRAHNYQ ARIKHKPSPL 70 80 90 100 110 120 LVKPAEQAPQ DVWERMRQGF ALQDSIDVNP RIEQQRLWFA SNPTFIESAG ERGSLYLHYI 130 140 150 160 170 180 VERLEERDMP LELALLPAIE SAYNPMAYSR ASAAGMWQFM PATGRHFNLR QTNFYDGRRD 190 200 210 220 230 240 VTASTNAALD YLTRLHDMFN GDWLLALAAY NAGEGTVSRA IERNERLGLP TDYWNLPLPQ 250 260 270 280 290 300 ETRDYVPKLL ALSQVVSTPE AYGVNLTPIA NEPYFEAVAI NDRLDLTRVA AFANIDEDEL 310 320 330 340 350 360 IQLNPAFKKR MTVDGPKQLL VPTAKAQLLS ASLSNLNPEQ LVSLQPPKAA FARAVAEAKA 370 380 390 400 410 420 PVGARSYRVK RGDNLSAIAK VNRVSVKDIK RWNRLSGNSL RAGQVLALRG GSAPSAAGNR 430 440 450 460 470 VAASGKRSTQ YKVRKGDSLY LVAKRFNVEM KHLKRWNPRS GHALKPGQTL TVYLGH

References

[1]

"Complete sequence of Pseudomonas putida F1." Copeland A., Lucas S., Lapidus A., Barry K., Detter J.C., Glavina del Rio T., Hammon N., Israni S., Dalin E., Tice H., Pitluck S., Chain P., Malfatti S., Shin M., Vergez L., Schmutz J., Larimer F., Land M. , Hauser L., Kyrpides N., Lykidis A., Parales R., Richardson P. Submitted (MAY-2007) to the EMBL/GenBank/DDBJ databases Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: F1 / ATCC 700007.

Cross-references

Sequence databases
EMBL GenBank DDBJ	CP000712 Genomic DNA. Translation: ABQ77876.1.
RefSeq	YP_001267060.1. NC_009512.1.
3D structure databases
ProteinModelPortal	A5W166.
ModBase	Search...
Protein-protein interaction databases
STRING	A5W166.
Protein family/group databases
CAZy	GH23. Glycoside Hydrolase Family 23.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
GeneID	5191445.
GenomeReviews	Gene locus Pput_1720 in contig CP000712_GR.
KEGG	ppf:Pput_1720.
PATRIC	19919521. VBIPsePut56420_1747.
Organism-specific databases
CMR	Search...
Phylogenomic databases
eggNOG	COG0741.
HOGENOM	HBG519241.
OMA	SLYLHYI.
ProtClustDB	CLSK866801.
Enzyme and pathway databases
BioCyc	PPUT351746:PPUT_1720-MONOMER.
Family and domain databases
InterPro	IPR023346. Lysozyme-like_dom. IPR008258. Lytic_TGlycosylase-like_cat. IPR010511. MltD_lipid-attach. IPR018392. Peptidoglycan-bd_lysin. IPR002482. Peptidoglycan-bd_Lysin_subgr. IPR000189. Transglyc_AS. [Graphical view]
KO	K08307.
Pfam	PF01476. LysM. 2 hits. PF06474. MLTD_N. 1 hit. PF01464. SLT. 1 hit. [Graphical view]
SMART	SM00257. LysM. 2 hits. [Graphical view]
SUPFAM	SSF53955. SSF53955. 1 hit.
PROSITE	PS00922. TRANSGLYCOSYLASE. 1 hit. [Graphical view]
ProtoNet	Search...

Entry information

Entry name

A5W166_PSEP1

Accession

Primary (citable) accession number: A5W166

Entry history

Integrated into UniProtKB/TrEMBL:	July 10, 2007
Last sequence update:	July 10, 2007
Last modified:	December 14, 2011
This is version 28 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)