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A5W0D6

- ASTB_PSEP1

UniProt

A5W0D6 - ASTB_PSEP1

Protein

N-succinylarginine dihydrolase

Gene

astB

Organism
Pseudomonas putida (strain F1 / ATCC 700007)
Status
Reviewed - Annotation score: 3 out of 5- Protein inferred from homologyi
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    • History
      Entry version 43 (01 Oct 2014)
      Sequence version 1 (10 Jul 2007)
      Previous versions | rss
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    Functioni

    Catalyzes the hydrolysis of N(2)-succinylarginine into N(2)-succinylornithine, ammonia and CO2.UniRule annotation

    Catalytic activityi

    N(2)-succinyl-L-arginine + 2 H2O = N(2)-succinyl-L-ornithine + 2 NH3 + CO2.UniRule annotation

    Pathwayi

    Sites

    Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
    Binding sitei110 – 1101SubstrateUniRule annotation
    Active sitei174 – 1741UniRule annotation
    Binding sitei214 – 2141SubstrateUniRule annotation
    Active sitei250 – 2501UniRule annotation
    Binding sitei252 – 2521SubstrateUniRule annotation
    Binding sitei365 – 3651SubstrateUniRule annotation
    Active sitei371 – 3711NucleophileUniRule annotation

    GO - Molecular functioni

    1. N-succinylarginine dihydrolase activity Source: UniProtKB-HAMAP

    GO - Biological processi

    1. arginine catabolic process to glutamate Source: UniProtKB-HAMAP
    2. arginine catabolic process to succinate Source: UniProtKB-UniPathway

    Keywords - Molecular functioni

    Hydrolase

    Keywords - Biological processi

    Arginine metabolism

    Enzyme and pathway databases

    BioCyciPPUT351746:GI26-1476-MONOMER.
    UniPathwayiUPA00185; UER00280.

    Names & Taxonomyi

    Protein namesi
    Recommended name:
    N-succinylarginine dihydrolaseUniRule annotation (EC:3.5.3.23UniRule annotation)
    Gene namesi
    Name:astBUniRule annotation
    Ordered Locus Names:Pput_1438
    OrganismiPseudomonas putida (strain F1 / ATCC 700007)
    Taxonomic identifieri351746 [NCBI]
    Taxonomic lineageiBacteriaProteobacteriaGammaproteobacteriaPseudomonadalesPseudomonadaceaePseudomonas
    ProteomesiUP000006553: Chromosome

    PTM / Processingi

    Molecule processing

    Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
    Chaini1 – 449449N-succinylarginine dihydrolasePRO_1000065733Add
    BLAST

    Interactioni

    Subunit structurei

    Homodimer.UniRule annotation

    Protein-protein interaction databases

    STRINGi351746.Pput_1438.

    Structurei

    3D structure databases

    ProteinModelPortaliA5W0D6.
    SMRiA5W0D6. Positions 3-447.
    ModBaseiSearch...
    MobiDBiSearch...

    Family & Domainsi

    Region

    Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
    Regioni19 – 2810Substrate bindingUniRule annotation
    Regioni137 – 1382Substrate bindingUniRule annotation

    Sequence similaritiesi

    Belongs to the succinylarginine dihydrolase family.UniRule annotation

    Phylogenomic databases

    eggNOGiCOG3724.
    HOGENOMiHOG000226005.
    KOiK01484.
    OMAiIAPTNCQ.
    OrthoDBiEOG6B8XDW.

    Family and domain databases

    Gene3Di3.75.10.20. 1 hit.
    HAMAPiMF_01172. AstB.
    InterProiIPR007079. SuccinylArg_d-Hdrlase_AstB.
    [Graphical view]
    PfamiPF04996. AstB. 1 hit.
    [Graphical view]
    TIGRFAMsiTIGR03241. arg_catab_astB. 1 hit.

    Sequencei

    Sequence statusi: Complete.

    A5W0D6-1 [UniParc]FASTAAdd to Basket

    « Hide

    MKSYEVNFDG LVGPTHNYGG LSYGNVASQS NSQQASNPRE AARQGLAKMK    50
    ALADMGFKQG VLAPQERPDV AALRRLGFSG SDADVIQRAA REAMPLLVAS 100
    CSASSMWVAN AATVSPSADT ADGRVHFTAA NLNCKYHRSI EHPTTSRVLG 150
    AMFNNEKHFA HHAALPAVAQ FGDEGAANHT RFCRAYGEAG VEFFVYGRSA 200
    FDSRYPAPQK YPARQTLEAS QAVARLHGLS DDGVVYAQQN PAVIDQGVFH 250
    NDVISVGNGE VLFYHEEAFL ETDAVLGQLR AKLASKGGNF QAICVPRAAV 300
    AVEDAVRSYL FNSQLLSRDD GSMLLVVPEE CRNNERVWAY LGQLTSQGGP 350
    VKEVKVFDLK QSMQNGGGPA CLRLRVALKE AELAAVNQGV IMTAPLYDTL 400
    LQWVDRHYRD RLGEADLADP QLLVECRTAL DELTQILKLG SVYPFQRQP 449
    Length:449
    Mass (Da):48,817
    Last modified:July 10, 2007 - v1
    Checksum:iFE58561DB0608119
    GO

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    CP000712 Genomic DNA. Translation: ABQ77596.1.
    RefSeqiYP_001266780.1. NC_009512.1.

    Genome annotation databases

    EnsemblBacteriaiABQ77596; ABQ77596; Pput_1438.
    GeneIDi5194776.
    KEGGippf:Pput_1438.
    PATRICi19918939. VBIPsePut56420_1462.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    CP000712 Genomic DNA. Translation: ABQ77596.1 .
    RefSeqi YP_001266780.1. NC_009512.1.

    3D structure databases

    ProteinModelPortali A5W0D6.
    SMRi A5W0D6. Positions 3-447.
    ModBasei Search...
    MobiDBi Search...

    Protein-protein interaction databases

    STRINGi 351746.Pput_1438.

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Genome annotation databases

    EnsemblBacteriai ABQ77596 ; ABQ77596 ; Pput_1438 .
    GeneIDi 5194776.
    KEGGi ppf:Pput_1438.
    PATRICi 19918939. VBIPsePut56420_1462.

    Phylogenomic databases

    eggNOGi COG3724.
    HOGENOMi HOG000226005.
    KOi K01484.
    OMAi IAPTNCQ.
    OrthoDBi EOG6B8XDW.

    Enzyme and pathway databases

    UniPathwayi UPA00185 ; UER00280 .
    BioCyci PPUT351746:GI26-1476-MONOMER.

    Family and domain databases

    Gene3Di 3.75.10.20. 1 hit.
    HAMAPi MF_01172. AstB.
    InterProi IPR007079. SuccinylArg_d-Hdrlase_AstB.
    [Graphical view ]
    Pfami PF04996. AstB. 1 hit.
    [Graphical view ]
    TIGRFAMsi TIGR03241. arg_catab_astB. 1 hit.
    ProtoNeti Search...

    Publicationsi

    1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
      Strain: F1 / ATCC 700007.

    Entry informationi

    Entry nameiASTB_PSEP1
    AccessioniPrimary (citable) accession number: A5W0D6
    Entry historyi
    Integrated into UniProtKB/Swiss-Prot: February 5, 2008
    Last sequence update: July 10, 2007
    Last modified: October 1, 2014
    This is version 43 of the entry and version 1 of the sequence. [Complete history]
    Entry statusiReviewed (UniProtKB/Swiss-Prot)
    Annotation programProkaryotic Protein Annotation Program

    Miscellaneousi

    Keywords - Technical termi

    Complete proteome

    Documents

    1. PATHWAY comments
      Index of metabolic and biosynthesis pathways
    2. SIMILARITY comments
      Index of protein domains and families

    External Data

    Dasty 3