A5VZL3 (A5VZL3_PSEP1) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
Beta-agarase EMBL ABQ77323.1
EC=3.2.1.81 EMBL ABQ77323.1

Gene names

Ordered Locus Names:

Pput_1162

Organism

Pseudomonas putida (strain F1 / ATCC 700007) [Complete proteome] [HAMAP] EMBL ABQ77323.1

Taxonomic identifier

351746 [NCBI]

Taxonomic lineage

Bacteria › Proteobacteria › Gammaproteobacteria › Pseudomonadales › Pseudomonadaceae › Pseudomonas

Protein attributes

Sequence length	744 AA.
Sequence status	Complete.
Sequence processing	The displayed sequence is further processed into a mature form.
Protein existence	Predicted

Ontologies

Keywords
Domain	Signal EMBL ABQ77323.1
Molecular function	Glycosidase EMBL ABQ77323.1 Hydrolase
Technical term	Complete proteome
Gene Ontology (GO)
Biological process	carbohydrate metabolic process Inferred from electronic annotation. Source: InterPro
Cellular component	beta-galactosidase complex Inferred from electronic annotation. Source: InterPro
Molecular function	beta-agarase activity Inferred from electronic annotation. Source: EC beta-galactosidase activity Inferred from electronic annotation. Source: InterPro cation binding Inferred from electronic annotation. Source: InterPro
Complete GO annotation...

Sequence annotation (Features)

	Feature key	Position(s)	Length	Description	Graphical view	Feature identifier
Molecule processing
	Signal peptide	1 – 21	21	Potential EMBL ABQ77323.1
	Chain	22 – 744	723	Potential EMBL ABQ77323.1		PRO_5000251745

Sequences

	Sequence		Length	Mass (Da)
	A5VZL3 [UniParc]. Last modified July 10, 2007. Version 1. Checksum: 05C5A96815EE8C6A	FASTA	744	82,139
	10 20 30 40 50 60 MIRRTLPAVF ALLCSSPLLA GQQTLFSFVR PASVVNVATV DAGMPQYNAE QTAEGEVLRR 70 80 90 100 110 120 VVFNPAQQPT LRLSPQSGVW DWSAGQFLTL RLQSAMDWAL TVDVTVQGSD GRALTSRIDL 130 140 150 160 170 180 PAGPAQTVLV PLTASSPLDQ GMRAGPPMPW NHGGQRLLLT SSAGAVDLKQ VTSVSLSIPS 190 200 210 220 230 240 PKVAQSLLIE RVGIQDDDQA YRAAYHELID AYGQSTRGNW PEKVSSDEQL KAADTREQQQ 250 260 270 280 290 300 LKGWLAERGK QQLDAYGGLV GGPAFAAKGF FRTEKRDGRW YLVTPDGHPF YSLGVNAVAA 310 320 330 340 350 360 DGGRTYVAGR EGMFKALPAE GDALAAFYGE SNNDDGNASS QGRNFKQGRW FDFYAANLQR 370 380 390 400 410 420 TYGKPCPPAV EGQPADCAPP VLDADRWQAH ALDRLQAWGF NTIGNWSEPA LGQARRMPYT 430 440 450 460 470 480 LPLSIVGDYA SISTGMDWWG RMPDPFDPRF AMATERAVAI AARDHRDDPW LIGYFADNEL 490 500 510 520 530 540 AWAAPGSDPK SRYGLAYGTL RLTTDVPAKR AFLKQLRDKY RNQEGLSKAW GIELTAWELM 550 560 570 580 590 600 EDPGFEAPLP DPEHPEIERD YQHFQRVFAE TYFKTISDSL KWHAPNHMLL GGRYAVSTPE 610 620 630 640 650 660 AVKACAEFCD VLSFNFYTLK PQDGYDFARL AELDKPVLVS EFQFGSRDRG PFWPGPLELA 670 680 690 700 710 720 REEDRGPAYA NFLKAAMAQP MIVGAHWFQY LDQPASGRLL DGENGHLGLV AITDRPYPGF 730 740 VDAVRKSNLQ TMNQLRAELE KPAP

References

[1]

"Complete sequence of Pseudomonas putida F1." Copeland A., Lucas S., Lapidus A., Barry K., Detter J.C., Glavina del Rio T., Hammon N., Israni S., Dalin E., Tice H., Pitluck S., Chain P., Malfatti S., Shin M., Vergez L., Schmutz J., Larimer F., Land M. , Hauser L., Kyrpides N., Lykidis A., Parales R., Richardson P. Submitted (MAY-2007) to the EMBL/GenBank/DDBJ databases Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: F1 / ATCC 700007.

Cross-references

Sequence databases
EMBL GenBank DDBJ	CP000712 Genomic DNA. Translation: ABQ77323.1.
RefSeq	YP_001266507.1. NC_009512.1.
3D structure databases
ProteinModelPortal	A5VZL3.
ModBase	Search...
Protein-protein interaction databases
STRING	A5VZL3.
Protein family/group databases
CAZy	GH50. Glycoside Hydrolase Family 50.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
GeneID	5192841.
GenomeReviews	Gene locus Pput_1162 in contig CP000712_GR.
KEGG	ppf:Pput_1162.
PATRIC	19918341. VBIPsePut56420_1170.
Organism-specific databases
CMR	Search...
Phylogenomic databases
eggNOG	NOG10914.
HOGENOM	HBG336281.
OMA	LDGENGH.
ProtClustDB	CLSK866307.
Enzyme and pathway databases
BioCyc	PPUT351746:PPUT_1162-MONOMER.
Family and domain databases
InterPro	IPR013529. Glyco_hydro_42_N. IPR013781. Glyco_hydro_subgr_catalytic. IPR017853. Glycoside_hydrolase_SF. [Graphical view]
Gene3D	G3DSA:3.20.20.80. Glyco_hydro_cat. 1 hit.
KO	K01219.
Pfam	PF02449. Glyco_hydro_42. 1 hit. [Graphical view]
SUPFAM	SSF51445. Glyco_hydro_cat. 1 hit.
ProtoNet	Search...

Entry information

Entry name

A5VZL3_PSEP1

Accession

Primary (citable) accession number: A5VZL3

Entry history

Integrated into UniProtKB/TrEMBL:	July 10, 2007
Last sequence update:	July 10, 2007
Last modified:	December 14, 2011
This is version 27 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)