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A5VZJ6

- A5VZJ6_PSEP1

UniProt

A5VZJ6 - A5VZJ6_PSEP1

Protein
Submitted name:

ATP dependent DNA ligase

Gene

Pput_1145

Organism
Pseudomonas putida (strain F1 / ATCC 700007)
Status
Unreviewed - Annotation score: 1 out of 5- Protein predictedi
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    • History
      Entry version 49 (01 Oct 2014)
      Sequence version 1 (10 Jul 2007)
      Previous versions | rss
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    Functioni

    GO - Molecular functioni

    1. ATP binding Source: InterPro
    2. DNA binding Source: InterPro
    3. DNA ligase (ATP) activity Source: InterPro

    GO - Biological processi

    1. DNA ligation involved in DNA repair Source: InterPro
    2. DNA recombination Source: InterPro

    Keywords - Molecular functioni

    LigaseImported

    Enzyme and pathway databases

    BioCyciPPUT351746:GI26-1173-MONOMER.

    Names & Taxonomyi

    Protein namesi
    Submitted name:
    ATP dependent DNA ligaseImported
    Gene namesi
    Ordered Locus Names:Pput_1145Imported
    OrganismiPseudomonas putida (strain F1 / ATCC 700007)Imported
    Taxonomic identifieri351746 [NCBI]
    Taxonomic lineageiBacteriaProteobacteriaGammaproteobacteriaPseudomonadalesPseudomonadaceaePseudomonas
    ProteomesiUP000006553: Chromosome

    Interactioni

    Protein-protein interaction databases

    STRINGi351746.Pput_1145.

    Structurei

    3D structure databases

    ProteinModelPortaliA5VZJ6.
    ModBaseiSearch...
    MobiDBiSearch...

    Family & Domainsi

    Phylogenomic databases

    eggNOGiCOG1793.
    HOGENOMiHOG000036007.
    KOiK01971.
    OMAiVPIVIPY.
    OrthoDBiEOG6Q8HXT.

    Family and domain databases

    Gene3Di2.40.50.140. 1 hit.
    InterProiIPR026333. ATP_dep_DNA_lig_pp_1105_fam.
    IPR012309. DNA_ligase_ATP-dep_C.
    IPR012310. DNA_ligase_ATP-dep_cent.
    IPR016059. DNA_ligase_ATP-dep_CS.
    IPR012308. DNA_ligase_ATP-dep_N.
    IPR012340. NA-bd_OB-fold.
    [Graphical view]
    PfamiPF04679. DNA_ligase_A_C. 1 hit.
    PF01068. DNA_ligase_A_M. 1 hit.
    PF04675. DNA_ligase_A_N. 1 hit.
    [Graphical view]
    SUPFAMiSSF50249. SSF50249. 1 hit.
    TIGRFAMsiTIGR04120. DNA_lig_bact. 1 hit.
    PROSITEiPS00697. DNA_LIGASE_A1. 1 hit.
    PS50160. DNA_LIGASE_A3. 1 hit.
    [Graphical view]

    Sequencei

    Sequence statusi: Complete.

    A5VZJ6-1 [UniParc]FASTAAdd to Basket

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    MKAFAALFLR LDATTSSNAK LEALRDYFDM APADDAAWAV YFLAGGRPRQ    50
    LVPTRLLREL ATALAGLPDW LFEESYQAVG DLAETISLLL PLHADGNDEG 100
    LATWVEQHLL PLRGLPPEQV RQRLPPLWAR LDRASLMLCL KLITGSFRVG 150
    VSKLLVTRAL AQLAGLDAKR VAQRLVGYTD IGHRPTAASY QRLIAPESAD 200
    EHNQRGGQPY PFFLAHPLQV SSDQFDTLLG PPSDWQIEWK WDGIRAQVVK 250
    RDGQLWVWSR GEELVTERFP ELHGLAQTLP DGVVLDGEIL VWKPGETETE 300
    LAVQPFALLQ QRIGRKTLGK KLLNDAPVVL QAYDLLEWQG DDWRSRPQHE 350
    RRSQLERLVD EHPLAPVLLS PLLQGPDWAD LARQREQSRS LGVEGLMLKQ 400
    REALYGVGRT KDMGIWWKWK IDPFSVDAVL IYAQRGHGRR ASLYSDYTFA 450
    VWDAPAGTPG RALVPFAKAY SGLSDEEMRK VDAIIRKTTV ETFGPVRSVT 500
    PTLVFELGFE GIALSRRHKS GIAVRFPRML RWRLDKPVEE ADDLATLQAL 550
    LA 552
    Length:552
    Mass (Da):62,035
    Last modified:July 10, 2007 - v1
    Checksum:iCDD9F069E5EA6857
    GO

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    CP000712 Genomic DNA. Translation: ABQ77306.1.
    RefSeqiYP_001266490.1. NC_009512.1.

    Genome annotation databases

    EnsemblBacteriaiABQ77306; ABQ77306; Pput_1145.
    GeneIDi5192987.
    KEGGippf:Pput_1145.
    PATRICi19918307. VBIPsePut56420_1153.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    CP000712 Genomic DNA. Translation: ABQ77306.1 .
    RefSeqi YP_001266490.1. NC_009512.1.

    3D structure databases

    ProteinModelPortali A5VZJ6.
    ModBasei Search...
    MobiDBi Search...

    Protein-protein interaction databases

    STRINGi 351746.Pput_1145.

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Genome annotation databases

    EnsemblBacteriai ABQ77306 ; ABQ77306 ; Pput_1145 .
    GeneIDi 5192987.
    KEGGi ppf:Pput_1145.
    PATRICi 19918307. VBIPsePut56420_1153.

    Phylogenomic databases

    eggNOGi COG1793.
    HOGENOMi HOG000036007.
    KOi K01971.
    OMAi VPIVIPY.
    OrthoDBi EOG6Q8HXT.

    Enzyme and pathway databases

    BioCyci PPUT351746:GI26-1173-MONOMER.

    Family and domain databases

    Gene3Di 2.40.50.140. 1 hit.
    InterProi IPR026333. ATP_dep_DNA_lig_pp_1105_fam.
    IPR012309. DNA_ligase_ATP-dep_C.
    IPR012310. DNA_ligase_ATP-dep_cent.
    IPR016059. DNA_ligase_ATP-dep_CS.
    IPR012308. DNA_ligase_ATP-dep_N.
    IPR012340. NA-bd_OB-fold.
    [Graphical view ]
    Pfami PF04679. DNA_ligase_A_C. 1 hit.
    PF01068. DNA_ligase_A_M. 1 hit.
    PF04675. DNA_ligase_A_N. 1 hit.
    [Graphical view ]
    SUPFAMi SSF50249. SSF50249. 1 hit.
    TIGRFAMsi TIGR04120. DNA_lig_bact. 1 hit.
    PROSITEi PS00697. DNA_LIGASE_A1. 1 hit.
    PS50160. DNA_LIGASE_A3. 1 hit.
    [Graphical view ]
    ProtoNeti Search...

    Publicationsi

    1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
      Strain: F1 / ATCC 700007Imported.

    Entry informationi

    Entry nameiA5VZJ6_PSEP1
    AccessioniPrimary (citable) accession number: A5VZJ6
    Entry historyi
    Integrated into UniProtKB/TrEMBL: July 10, 2007
    Last sequence update: July 10, 2007
    Last modified: October 1, 2014
    This is version 49 of the entry and version 1 of the sequence. [Complete history]
    Entry statusiUnreviewed (UniProtKB/TrEMBL)

    Miscellaneousi

    Keywords - Technical termi

    Complete proteomeImported

    External Data

    Dasty 3