A5VR04 (RL23_BRUO2) Reviewed, UniProtKB/Swiss-Prot

Names and origin

Protein names

Recommended name:
50S ribosomal protein L23

Gene names

Name:	rplW
Ordered Locus Names:	BOV_1194

Organism

Brucella ovis (strain ATCC 25840 / 63/290 / NCTC 10512) [Complete proteome] [HAMAP]

Taxonomic identifier

444178 [NCBI]

Taxonomic lineage

Bacteria › Proteobacteria › Alphaproteobacteria › Rhizobiales › Brucellaceae › Brucella

Protein attributes

Sequence length	97 AA.
Sequence status	Complete.
Protein existence	Inferred from homology

General annotation (Comments)

Function	One of the early assembly proteins it binds 23S rRNA. One of the proteins that surrounds the polypeptide exit tunnel on the outside of the ribosome. Forms the main docking site for trigger factor binding to the ribosome By similarity. HAMAP MF_01369_B
Subunit structure	Part of the 50S ribosomal subunit. Contacts protein L29, and trigger factor when it is bound to the ribosome By similarity.
Sequence similarities	Belongs to the ribosomal protein L23P family.

Ontologies

Keywords
Ligand	RNA-binding rRNA-binding
Molecular function	Ribonucleoprotein Ribosomal protein
Technical term	Complete proteome
Gene Ontology (GO)
Biological process	translation Inferred from electronic annotation. Source: InterPro
Cellular component	ribosome Inferred from electronic annotation. Source: UniProtKB-KW
Molecular function	nucleotide binding Inferred from electronic annotation. Source: InterPro rRNA binding Inferred from electronic annotation. Source: UniProtKB-KW structural constituent of ribosome Inferred from electronic annotation. Source: InterPro
Complete GO annotation...

Sequence annotation (Features)

	Feature key	Position(s)	Length	Description	Graphical view	Feature identifier
Molecule processing
	Chain	1 – 97	97	50S ribosomal protein L23 HAMAP MF_01369_B		PRO_1000068044

Sequences

	Sequence		Length	Mass (Da)
	A5VR04 [UniParc]. Last modified July 10, 2007. Version 1. Checksum: A485EE3886022FA3	FASTA	97	10,535
	10 20 30 40 50 60 MTDLRHYDVI VSPVITEKST MVSEHNQVVF NVARKATKPE IKAAVEALFG VKVTAVNTAV 70 80 90 RKGKVKRFRG LVGRQSDVKK AIVTLAEGQS IDVSTGL

References

[1]	Paulsen I. Submitted (MAY-2007) to the EMBL/GenBank/DDBJ databases Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: ATCC 25840 / 63/290 / NCTC 10512.

Cross-references

Sequence databases
EMBL GenBank DDBJ	CP000708 Genomic DNA. Translation: ABQ61591.1.
RefSeq	YP_001259151.1. NC_009505.1.
3D structure databases
ProteinModelPortal	A5VR04.
ModBase	Search...
Protein-protein interaction databases
STRING	A5VR04.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
GeneID	5201349.
GenomeReviews	Gene locus BOV_1194 in contig CP000708_GR.
KEGG	bov:BOV_1194.
PATRIC	17862326. VBIBruOvi136990_2566.
TIGR	BOV_1194.
Phylogenomic databases
HOGENOM	HBG439330.
OMA	WKKAYVS.
ProtClustDB	PRK05738.
Family and domain databases
HAMAP	MF_01369_B. Ribosomal_L23_B. [Tree]
InterPro	IPR012677. Nucleotide-bd_a/b_plait. IPR012678. Ribosomal_L23/L15e_core_dom. IPR013025. Ribosomal_L25/23. [Graphical view]
Gene3D	G3DSA:3.30.70.330. a_b_plait_nuc_bd. 1 hit.
KO	K02892.
Pfam	PF00276. Ribosomal_L23. 1 hit. [Graphical view]
SUPFAM	SSF54189. L23_L15e_core. 1 hit.
PROSITE	PS00050. RIBOSOMAL_L23. False negative. [Graphical view]
ProtoNet	Search...

Entry information

Entry name

RL23_BRUO2

Accession

Primary (citable) accession number: A5VR04

Entry history

Integrated into UniProtKB/Swiss-Prot:	February 5, 2008
Last sequence update:	July 10, 2007
Last modified:	December 14, 2011
This is version 30 of the entry and version 1 of the sequence. [Complete history]

Entry status

Reviewed (UniProtKB/Swiss-Prot)

Annotation program

Prokaryotic Protein Annotation Program