A5VLX9 (A5VLX9_LACRD) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
Alpha amylase, catalytic region EMBL ABQ83853.1

Gene names

Ordered Locus Names:

Lreu_1613

Organism

Lactobacillus reuteri (strain DSM 20016) [Complete proteome] [HAMAP] EMBL ABQ83853.1

Taxonomic identifier

557436 [NCBI]

Taxonomic lineage

Bacteria › Firmicutes › Lactobacillales › Lactobacillaceae › Lactobacillus

Protein attributes

Sequence length	589 AA.
Sequence status	Complete.
Protein existence	Predicted

Ontologies

Keywords
Technical term	Complete proteome
Gene Ontology (GO)
Biological process	carbohydrate metabolic process Inferred from electronic annotation. Source: InterPro
Molecular function	cation binding Inferred from electronic annotation. Source: InterPro hydrolase activity, hydrolyzing O-glycosyl compounds Inferred from electronic annotation. Source: InterPro
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	A5VLX9 [UniParc]. Last modified July 10, 2007. Version 1. Checksum: 21C783D01F4D4583	FASTA	589	67,548
	10 20 30 40 50 60 MMNLAAIYHR PESEMAFLYD SQTMHIRLRT AKDDVKAVQL LHGDPYSLRS LAGIKPPFYT 70 80 90 100 110 120 KPTPMKKILS DDLYDYWQIA VTEPKKRLAY AFDITGADGT RTVYTDRGYL QPDDHAALND 130 140 150 160 170 180 LNTYFRMPFF QEIDMFHAPE WVKKTVWYQI FPDRFANGDQ SNDPAGTKKW NANDHPGRQD 190 200 210 220 230 240 FYGGDLQGVL DHLDHLQALG VNGIYFNPLF KAPSNHKYDT EDYYQIDPHF GDAALFKEVV 250 260 270 280 290 300 AQAHKRGIKV MLDAVFNHIG DKSPQWQDVL KNGQNSKYAD WFHVNKFPAT YTPTKNFEFT 310 320 330 340 350 360 PDATYDTFDY TPHMPKLNTA NPAVQDYLLG IAKYWIEEFD IDAWRLDVAN EIDHHFWKRF 370 380 390 400 410 420 HQETTALKPD FYILGEIWHT SQAWLNGDEF SGVMNYSYTG AILDHFINHR LSAERMIDQL 430 440 450 460 470 480 SNQLMKYRDQ TNQMMFNVLD SHDTARIMTQ AHDNRDLVKQ TFAFTFLQPG TPSIYYGTEY 490 500 510 520 530 540 GMDGDNDPDC RKPMNWAPDD DAQEMLAYFK KLVALRRDYA DLIAGGTIAF NVLPIGVVEV 550 560 570 580 SRTGAGKVLK GFFNTTGAPA ELATRGQLLL SQGMQGHQLA PDGFAITIE

References

[1]

"The evolution of host specialization in the vertebrate gut symbiont Lactobacillus reuteri." Frese S.A., Benson A.K., Tannock G.W., Loach D.M., Kim J., Zhang M., Oh P.L., Heng N.C., Patil P.B., Juge N., Mackenzie D.A., Pearson B.M., Lapidus A., Dalin E., Tice H., Goltsman E., Land M., Hauser L. , Ivanova N., Kyrpides N.C., Walter J. PLoS Genet. 7:E1001314-E1001314(2011) [PubMed: 21379339] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: DSM 20016.

Cross-references

Sequence databases
EMBL GenBank DDBJ	CP000705 Genomic DNA. Translation: ABQ83853.1.
RefSeq	YP_001272190.1. NC_009513.1.
3D structure databases
ProteinModelPortal	A5VLX9.
ModBase	Search...
Protein-protein interaction databases
STRING	A5VLX9.
Protein family/group databases
CAZy	CBM34. Carbohydrate-Binding Module Family 34. GH13. Glycoside Hydrolase Family 13.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
GeneID	5188488.
GenomeReviews	Gene locus Lreu_1613 in contig CP000705_GR.
KEGG	lre:Lreu_1613.
PATRIC	22256486. VBILacReu87937_1631.
Organism-specific databases
CMR	Search...
Phylogenomic databases
HOGENOM	HBG726713.
OMA	ETVWYQI.
ProtClustDB	CLSK797212.
Family and domain databases
InterPro	IPR015902. Alpha_amylase. IPR006047. Glyco_hydro_13_cat_dom. IPR004185. Glyco_hydro_13_lg-like_dom. IPR006589. Glyco_hydro_13_sub_cat_dom. IPR013781. Glyco_hydro_subgr_catalytic. IPR017853. Glycoside_hydrolase_SF. IPR013783. Ig-like_fold. [Graphical view]
Gene3D	G3DSA:3.20.20.80. Glyco_hydro_cat. 1 hit. G3DSA:2.60.40.10. Ig-like_fold. 1 hit.
KO	K01234.
PANTHER	PTHR10357. Alpha_amylase. 1 hit.
Pfam	PF00128. Alpha-amylase. 1 hit. PF02903. Alpha-amylase_N. 1 hit. [Graphical view]
SMART	SM00642. Aamy. 1 hit. [Graphical view]
SUPFAM	SSF51445. Glyco_hydro_cat. 1 hit.
ProtoNet	Search...

Entry information

Entry name

A5VLX9_LACRD

Accession

Primary (citable) accession number: A5VLX9

Entry history

Integrated into UniProtKB/TrEMBL:	July 10, 2007
Last sequence update:	July 10, 2007
Last modified:	December 14, 2011
This is version 34 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)