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A5VJZ8 (A5VJZ8_LACRD) Unreviewed, UniProtKB/TrEMBL

Last modified December 14, 2011. Version 32. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein namesSubmitted name:
Glycoside hydrolase, clan GH-D EMBL ABQ83172.1
Gene names
Ordered Locus Names:Lreu_0910
OrganismLactobacillus reuteri (strain DSM 20016) [Complete proteome] [HAMAP] EMBL ABQ83172.1
Taxonomic identifier557436 [NCBI]
Taxonomic lineageBacteria › Firmicutes › Lactobacillales › Lactobacillaceae › Lactobacillus

Protein attributes

Sequence length729 AA.
Sequence statusComplete.
Protein existencePredicted

Ontologies

Keywords
   Molecular functionHydrolase EMBL ABQ83172.1
   Technical termComplete proteome
Gene Ontology (GO)
   Biological processcarbohydrate metabolic process

Inferred from electronic annotation. Source: InterPro

   Molecular functionalpha-galactosidase activity

Inferred from electronic annotation. Source: InterPro

Complete GO annotation...

Sequences

Sequence LengthMass (Da)Tools
A5VJZ8 [UniParc].

Last modified July 10, 2007. Version 1.
Checksum: 6EC37A60E7FF0509

FASTA72984,004
        10         20         30         40         50         60 
MITFDEQQRV FHLKNKEISY LFSVEEGNIL SHLYFGPAIR NYHGERRYPR VDRGFSGNLP 

        70         80         90        100        110        120 
GSMDRTYSKD DLLQEYSGNN TGDYRVPAII IKTENGSRLT DFRYKSYKIL PGKPKLAGLP 

       130        140        150        160        170        180 
ASYVKSDKEA ETLEVILVDE TIGAQLILSY TIYNERPVIT RNARLVNTSN QELRIEKIAS 

       190        200        210        220        230        240 
MQLDLTKHDY DVISVPGQYA LERQPERQEL RRGITEFSSR RNSSSHHMNP FVALVDKNTD 

       250        260        270        280        290        300 
EFQGNALGVL LVYSGNHQFT LEKDQIDQIR LITGINDYDF EWVLEPGKDF QTPEAIMGFS 

       310        320        330        340        350        360 
QQGLNGMSQV FHKLLRDRVA RGKYQYADRP IVINNWEATF FDFDDKKLDQ IIDEAKPLGI 

       370        380        390        400        410        420 
EMFVLDDGWF GHRNDDNSSL GDWFVNQDKL TGGLKRVADR THEHGMKFGL WFEPEMISVD 

       430        440        450        460        470        480 
SKLYKEHPDY ALHEPNRGMT LSRNQLVLDF SRKEVVDNIY NQMCLILDKV LLDYIKWDFN 

       490        500        510        520        530        540 
RNLTEVFSSA ADADHQGEIS HRYVLGLYDL MERLVTRYPN ILFEGCSGGG GRFDAGILYY 

       550        560        570        580        590        600 
MPQSWPSDDT DAVERLKIQY GTSLTYPISS MTAHVSVSPN QQTGRSTSFK MRGDVAMSGV 

       610        620        630        640        650        660 
FGYELDLADL TEEDRQMVKE QIKFYKAHRH LIQYGAFIRL ESPFDSNTVA WEFVSPDKSE 

       670        680        690        700        710        720 
ALLFMFKQLH TNRFEINNTK MAGLDPTIDY HDEMTDKTYG GDELMNVGLF RDPTHTGDFI 


SEVHYFKGE

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References

[1]"The evolution of host specialization in the vertebrate gut symbiont Lactobacillus reuteri."
Frese S.A., Benson A.K., Tannock G.W., Loach D.M., Kim J., Zhang M., Oh P.L., Heng N.C., Patil P.B., Juge N., Mackenzie D.A., Pearson B.M., Lapidus A., Dalin E., Tice H., Goltsman E., Land M., Hauser L. expand/collapse author list , Ivanova N., Kyrpides N.C., Walter J.
PLoS Genet. 7:E1001314-E1001314(2011) [PubMed: 21379339] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: DSM 20016.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ		CP000705 Genomic DNA. Translation: ABQ83172.1.
RefSeqYP_001271509.1. NC_009513.1.

3D structure databases

ProteinModelPortalA5VJZ8.
ModBaseSearch...

Protein-protein interaction databases

STRINGA5VJZ8.

Protein family/group databases

CAZyGH36. Glycoside Hydrolase Family 36.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

GeneID5189038.
GenomeReviewsGene locus Lreu_0910 in contig CP000705_GR.
KEGGlre:Lreu_0910.
PATRIC22254985. VBILacReu87937_0919.

Organism-specific databases

CMRSearch...

Phylogenomic databases

HOGENOMHBG302872.
OMAMPQTWTS.
ProtClustDBCLSK821533.

Family and domain databases

InterProIPR013785. Aldolase_TIM.
IPR002252. Glyco_hydro_36.
IPR000111. Glyco_hydro_GHD.
IPR017853. Glycoside_hydrolase_SF.
[Graphical view]
Gene3DG3DSA:3.20.20.70. Aldolase_TIM. 1 hit.
KOK07407.
PfamPF02065. Melibiase. 1 hit.
[Graphical view]
PIRSFPIRSF005536. Agal. 1 hit.
PRINTSPR00743. GLHYDRLASE36.
SUPFAMSSF51445. Glyco_hydro_cat. 1 hit.
PROSITEPS00512. ALPHA_GALACTOSIDASE. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameA5VJZ8_LACRD
AccessionPrimary (citable) accession number: A5VJZ8
Entry history
Integrated into UniProtKB/TrEMBL: July 10, 2007
Last sequence update: July 10, 2007
Last modified: December 14, 2011
This is version 32 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)
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