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A5VIT9 (A5VIT9_LACRD) Unreviewed, UniProtKB/TrEMBL

Last modified December 14, 2011. Version 31. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein namesSubmitted name:
L-carnitine dehydratase/bile acid-inducible protein F EMBL ABQ82763.1
Gene names
Ordered Locus Names:Lreu_0495
OrganismLactobacillus reuteri (strain DSM 20016) [Complete proteome] [HAMAP] EMBL ABQ82763.1
Taxonomic identifier557436 [NCBI]
Taxonomic lineageBacteria › Firmicutes › Lactobacillales › Lactobacillaceae › Lactobacillus

Protein attributes

Sequence length284 AA.
Sequence statusComplete.
Protein existencePredicted

Ontologies

Keywords
   Technical termComplete proteome
Gene Ontology (GO)
   Molecular functioncatalytic activity

Inferred from electronic annotation. Source: InterPro

Complete GO annotation...

Sequences

Sequence LengthMass (Da)Tools
A5VIT9 [UniParc].

Last modified July 10, 2007. Version 1.
Checksum: 25F725E27B81F9D7

FASTA28431,287
        10         20         30         40         50         60 
MTEQSENAPL KGIKVVDWTQ VQSGPSCTQL LAWLGADVIK IERTNTGDPT RNELLDIKDS 

        70         80         90        100        110        120 
WSLYYLQLNA NKKSLTLDIK TPEGQKIMYD LLKKADVFVE NIRPGAATRA GFGWKKVHEL 

       130        140        150        160        170        180 
NPRLIMASLK GFNKGSRFAN VKAFEPVAQS AGGAASATGW NEGDANIPTQ SAAALGDSNS 

       190        200        210        220        230        240 
GMHLTIAILA ALLQREHTGK GSYVYQSMQD AVINLCRIKL RDQLMLDNLG ALPFYAVYPN 

       250        260        270        280 
YKWGKAIPRS ENSEGGQVIG WTYKAKGWET DPNAYVYINV FRPS

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References

[1]"The evolution of host specialization in the vertebrate gut symbiont Lactobacillus reuteri."
Frese S.A., Benson A.K., Tannock G.W., Loach D.M., Kim J., Zhang M., Oh P.L., Heng N.C., Patil P.B., Juge N., Mackenzie D.A., Pearson B.M., Lapidus A., Dalin E., Tice H., Goltsman E., Land M., Hauser L. expand/collapse author list , Ivanova N., Kyrpides N.C., Walter J.
PLoS Genet. 7:E1001314-E1001314(2011) [PubMed: 21379339] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: DSM 20016.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ		CP000705 Genomic DNA. Translation: ABQ82763.1.
RefSeqYP_001271100.1. NC_009513.1.

3D structure databases

ProteinModelPortalA5VIT9.
SMRA5VIT9. Positions 7-277.
ModBaseSearch...

Protein-protein interaction databases

STRINGA5VIT9.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

GeneID5188955.
GenomeReviewsGene locus Lreu_0495 in contig CP000705_GR.
KEGGlre:Lreu_0495.
PATRIC22254107. VBILacReu87937_0510.

Organism-specific databases

CMRSearch...

Phylogenomic databases

HOGENOMHBG659028.
OMAIVEVPHK.
ProtClustDBCLSK2326161.

Family and domain databases

InterProIPR003673. CoA-Trfase_fam_III.
IPR023606. CoA-Trfase_III_dom.
[Graphical view]
Gene3DG3DSA:3.40.50.10540. CoA-Trfase_fam_III. 1 hit.
KOK07749.
PANTHERPTHR11837. CAIB_BAIF. 1 hit.
PfamPF02515. CoA_transf_3. 1 hit.
[Graphical view]
SUPFAMSSF89796. CoA-Trfase_fam_III. 1 hit.
ProtoNetSearch...

Entry information

Entry nameA5VIT9_LACRD
AccessionPrimary (citable) accession number: A5VIT9
Entry history
Integrated into UniProtKB/TrEMBL: July 10, 2007
Last sequence update: July 10, 2007
Last modified: December 14, 2011
This is version 31 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)
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