A5VI08 (A5VI08_LACRD) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
RNAse M5 EMBL ABQ82482.1
EC=3.1.26.8 EMBL ABQ82482.1

Gene names

Ordered Locus Names:

Lreu_0212

Organism

Lactobacillus reuteri (strain DSM 20016) [Complete proteome] [HAMAP] EMBL ABQ82482.1

Taxonomic identifier

557436 [NCBI]

Taxonomic lineage

Bacteria › Firmicutes › Lactobacillales › Lactobacillaceae › Lactobacillus

Protein attributes

Sequence length	188 AA.
Sequence status	Complete.
Protein existence	Predicted

Ontologies

Keywords
Molecular function	Hydrolase EMBL ABQ82482.1
Technical term	Complete proteome
Gene Ontology (GO)
Molecular function	ribonuclease M5 activity Inferred from electronic annotation. Source: EC
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	A5VI08 [UniParc]. Last modified July 10, 2007. Version 1. Checksum: A83BB68DBADFF3BC	FASTA	188	21,042
	10 20 30 40 50 60 MIRIKEVIVV EGKDDTKQIL KAVDADTYET NGSAISTADL AKLKKLQASR GLIVFTDPDF 70 80 90 100 110 120 NGERIRKIIS EAIPGVKHAF IKRKDGVPTE AHGSLGVEHA TPAVIKSALE HLYTQTTTPQ 130 140 150 160 170 180 QVFKREDLQK WGLTGQADSR KRREKLGQLL GIGYGNGKQL IHRLNMFQVD RATFEQAIKQ INQEEDHE

References

[1]

"The evolution of host specialization in the vertebrate gut symbiont Lactobacillus reuteri." Frese S.A., Benson A.K., Tannock G.W., Loach D.M., Kim J., Zhang M., Oh P.L., Heng N.C., Patil P.B., Juge N., Mackenzie D.A., Pearson B.M., Lapidus A., Dalin E., Tice H., Goltsman E., Land M., Hauser L. , Ivanova N., Kyrpides N.C., Walter J. PLoS Genet. 7:E1001314-E1001314(2011) [PubMed: 21379339] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: DSM 20016.

Cross-references

Sequence databases
EMBL GenBank DDBJ	CP000705 Genomic DNA. Translation: ABQ82482.1.
RefSeq	YP_001270819.1. NC_009513.1.
3D structure databases
ProteinModelPortal	A5VI08.
ModBase	Search...
Protein-protein interaction databases
STRING	A5VI08.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
GeneID	5189573.
GenomeReviews	Gene locus Lreu_0212 in contig CP000705_GR.
KEGG	lre:Lreu_0212.
PATRIC	22253506. VBILacReu87937_0221.
Organism-specific databases
CMR	Search...
Phylogenomic databases
HOGENOM	HBG304082.
OMA	DTIETRG.
ProtClustDB	CLSK2326050.
Family and domain databases
InterPro	IPR004466. PrimaseG-like. IPR006171. Toprim_domain. [Graphical view]
KO	K05985.
Pfam	PF01751. Toprim. 1 hit. [Graphical view]
SMART	SM00493. TOPRIM. 1 hit. [Graphical view]
TIGRFAMs	TIGR00334. 5S_RNA_mat_M5. 1 hit.
ProtoNet	Search...

Entry information

Entry name

A5VI08_LACRD

Accession

Primary (citable) accession number: A5VI08

Entry history

Integrated into UniProtKB/TrEMBL:	July 10, 2007
Last sequence update:	July 10, 2007
Last modified:	December 14, 2011
This is version 34 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)