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A5VGT0 (A5VGT0_SPHWW) Unreviewed, UniProtKB/TrEMBL

Last modified April 16, 2014. Version 41. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein names
Gene names
Ordered Locus Names:Swit_5388 EMBL ABQ71496.1
Encoded onPlasmid pSWIT01 EMBL ABQ71496.1
OrganismSphingomonas wittichii (strain RW1 / DSM 6014 / JCM 10273) [Complete proteome] [HAMAP] EMBL ABQ71496.1
Taxonomic identifier392499 [NCBI]
Taxonomic lineageBacteriaProteobacteriaAlphaproteobacteriaSphingomonadalesSphingomonadaceaeSphingomonas

Protein attributes

Sequence length446 AA.
Sequence statusComplete.
Protein existencePredicted

Ontologies

Sequences

Sequence LengthMass (Da)Tools
A5VGT0 [UniParc].

Last modified July 10, 2007. Version 1.
Checksum: 310892ACFA0A8980

FASTA44649,130
        10         20         30         40         50         60 
MKRRIAIDQI EAGMYLVGFE GFWLLHPFWR TKFVLTQADI SEIRASGVKA VFIDDEKGAA 

        70         80         90        100        110        120 
PICVTAPTPS APLTPPPAPA KRMEAARHWR SFPAPSPSPR RLIVDVDEVQ RATEAIQRSK 

       130        140        150        160        170        180 
RVIMRMFGEA RMGKAVALRD VEPIVDEIAE SVIRDAAAMI KVTRLKRKNE YTYLHSVAVC 

       190        200        210        220        230        240 
ALMINLGRQL GLAESLTRDL GIAGLMHDIG KMSVPGTVLD KPGSLNSDEF EIIRAHPQKG 

       250        260        270        280        290        300 
HELLLMTEGI SPIALDVCLH HHERVDGTGY PFGLTAEQLS LHARMGAVCD VYDAVTSRRP 

       310        320        330        340        350        360 
YKDPWTPSDA LAKMLEWEGH FDPDVLDAFI SSIGIYPVGT LVRLRTNRLG IVVAGNAREP 

       370        380        390        400        410        420 
TMPAVRAFFS TTEREFLPPE IVICSATLKG DAAIGIENGQ AWFGPRWPVI QAFVLDNRMP 

       430        440 
TADLNGAGQS IIASPGMDQR RFAARN 

« Hide

References

[1]"Complete sequence of plasmid pSWIT01 of Sphingomonas wittichii RW1."
US DOE Joint Genome Institute
Copeland A., Lucas S., Lapidus A., Barry K., Glavina del Rio T., Dalin E., Tice H., Pitluck S., Saunders E., Brettin T., Bruce D., Detter J.C., Han C., Tapia R., Gilna P., Schmutz J., Larimer F., Land M. expand/collapse author list , Hauser L., Kyrpides N., Kim E., Halden R.U., Miller T.R., Salzberg S.L., Eisen J.A., Richardson P.
Submitted (MAY-2007) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: RW1 / DSM 6014 / JCM 10273.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
CP000700 Genomic DNA. Translation: ABQ71496.1.
RefSeqYP_001260263.1. NC_009507.1.

3D structure databases

ProteinModelPortalA5VGT0.
ModBaseSearch...
MobiDBSearch...

Protein-protein interaction databases

STRING392499.Swit_5388.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaABQ71496; ABQ71496; Swit_5388.
GeneID5195855.
KEGGswi:Swit_5388.
PATRIC23678568. VBISphWit55028_0261.

Organism-specific databases

CMRSearch...

Phylogenomic databases

eggNOGCOG2206.
HOGENOMHOG000280223.
OMAHELLLMT.
OrthoDBEOG6PP9MV.

Enzyme and pathway databases

BioCycSWIT392499:GHZK-5217-MONOMER.

Family and domain databases

Gene3D1.10.3210.10. 1 hit.
InterProIPR021812. DUF3391.
IPR003607. HD/PDEase_dom.
IPR006674. HD_domain.
[Graphical view]
PfamPF11871. DUF3391. 1 hit.
[Graphical view]
SMARTSM00471. HDc. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameA5VGT0_SPHWW
AccessionPrimary (citable) accession number: A5VGT0
Entry history
Integrated into UniProtKB/TrEMBL: July 10, 2007
Last sequence update: July 10, 2007
Last modified: April 16, 2014
This is version 41 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)