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A5VED7 (A5VED7_SPHWW) Unreviewed, UniProtKB/TrEMBL

Last modified May 1, 2013. Version 35. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein names
EC=4.1.1.77 EMBL ABQ70653.1
Gene names
Ordered Locus Names:Swit_4313 EMBL ABQ70653.1
OrganismSphingomonas wittichii (strain RW1 / DSM 6014 / JCM 10273) [Complete proteome] [HAMAP] EMBL ABQ70653.1
Taxonomic identifier392499 [NCBI]
Taxonomic lineageBacteriaProteobacteriaAlphaproteobacteriaSphingomonadalesSphingomonadaceaeSphingomonas

Protein attributes

Sequence length268 AA.
Sequence statusComplete.
Protein existencePredicted

Ontologies

Keywords
   Molecular functionLyase EMBL ABQ70653.1
   Technical termComplete proteome
Gene Ontology (GO)
   Biological_processaromatic compound catabolic process

Inferred from electronic annotation. Source: InterPro

   Molecular_function4-oxalocrotonate decarboxylase activity

Inferred from electronic annotation. Source: EC

Complete GO annotation...

Sequences

Sequence LengthMass (Da)Tools
A5VED7 [UniParc].

Last modified July 10, 2007. Version 1.
Checksum: 8A09E5D734F1A091

FASTA26828,670
        10         20         30         40         50         60 
MPLDPSIIEA CAEQLDAAER GRSQIGQFSL AYPEMTIEDG YAIQRAWVRR KLAAGRTLIG 

        70         80         90        100        110        120 
HKIGLTSRAM QRSSNITEPD YGALLDDMLF EDGGDIPADR FIEPRVEVEL AFILGKRLEG 

       130        140        150        160        170        180 
PGCTIFDVLD ATDYVVPAIE IIDARIERID PATGVTRKVF DTISDNAANA GLVLGSRPAR 

       190        200        210        220        230        240 
PDAVDLRWIA ALIHRNGVIE DSGVAAAVLG HPAKGPAWLA NKLAPHGEAL EAGEIILGGS 

       250        260 
FTAPVFARPG DGFHVDFGGM GSISVRFA 

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References

[1]"Complete sequence of chromosome of Sphingomonas wittichii RW1."
US DOE Joint Genome Institute
Copeland A., Lucas S., Lapidus A., Barry K., Glavina del Rio T., Dalin E., Tice H., Pitluck S., Saunders E., Brettin T., Bruce D., Detter J.C., Han C., Tapia R., Gilna P., Schmutz J., Larimer F., Land M. expand/collapse author list , Hauser L., Kyrpides N., Kim E., Halden R.U., Miller T.R., Salzberg S.L., Eisen J.A., Richardson P.
Submitted (MAY-2007) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: RW1 / DSM 6014 / JCM 10273.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
CP000699 Genomic DNA. Translation: ABQ70653.1.
RefSeqYP_001264791.1. NC_009511.1.

3D structure databases

ProteinModelPortalA5VED7.
SMRA5VED7. Positions 12-267.
ModBaseSearch...

Protein-protein interaction databases

STRING392499.Swit_4313.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaABQ70653; ABQ70653; Swit_4313.
GeneID5197349.
KEGGswi:Swit_4313.
PATRIC23687925. VBISphWit55028_4890.

Organism-specific databases

CMRSearch...

Phylogenomic databases

eggNOGCOG3971.
HOGENOMHOG000179639.
KOK02509.
OMAGTVSCHF.

Family and domain databases

Gene3D3.90.850.10. 1 hit.
InterProIPR002529. Fumarylacetoacetase_C.
IPR011234. Fumarylacetoacetase_C-rel.
IPR012690. HpaH.
[Graphical view]
PfamPF01557. FAA_hydrolase. 1 hit.
[Graphical view]
SUPFAMSSF56529. Fumarylacetoacetase_C-rel. 1 hit.
TIGRFAMsTIGR02312. HpaH. 1 hit.
ProtoNetSearch...

Entry information

Entry nameA5VED7_SPHWW
AccessionPrimary (citable) accession number: A5VED7
Entry history
Integrated into UniProtKB/TrEMBL: July 10, 2007
Last sequence update: July 10, 2007
Last modified: May 1, 2013
This is version 35 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)