A5VED5 (A5VED5_SPHWW) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
Extradiol ring-cleavage dioxygenase, class III enzyme, subunit B EMBL ABQ70651.1

Gene names

Ordered Locus Names:

Swit_4311

Organism

Sphingomonas wittichii (strain RW1 / DSM 6014 / JCM 10273) [Complete proteome] [HAMAP]

Taxonomic identifier

392499 [NCBI]

Taxonomic lineage

Bacteria › Proteobacteria › Alphaproteobacteria › Sphingomonadales › Sphingomonadaceae › Sphingomonas

Protein attributes

Sequence length	272 AA.
Sequence status	Complete.
Protein existence	Predicted

Ontologies

Keywords
Molecular function	Dioxygenase EMBL ABQ70651.1 Oxidoreductase
Technical term	Complete proteome
Gene Ontology (GO)
Biological process	cellular aromatic compound metabolic process Inferred from electronic annotation. Source: InterPro
Molecular function	ferrous iron binding Inferred from electronic annotation. Source: InterPro oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen Inferred from electronic annotation. Source: UniProtKB-KW
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	A5VED5 [UniParc]. Last modified July 10, 2007. Version 1. Checksum: 3D8DBC479A074EFC	FASTA	272	29,758
	10 20 30 40 50 60 MSLVFSGVCS HAPGITGRAD RAPVEQKEAL YAAFDDMRAR LHATRPDAII VIAAEHFANF 70 80 90 100 110 120 FMNNMPAYAM GMADGYDGPI EDPAWLAIPK RRAKGDPDLS QRLIAEVQQT VDVAFAEEWR 130 140 150 160 170 180 FDHGIMVPLH FLDPHNELTV IPANINCQGP PLTPLHRAWA FGEALRRAAD AVPERIALVG 190 200 210 220 230 240 TGGISHWPAT PDSGRINEAW DRDFLDRWSR GDKAAMLDYT DAQTYAEAGQ GGFEIRTFIA 250 260 270 AAAAARGRGT VHYFEPIPIF AVGCTVATME IA

References

[1]

"Complete sequence of chromosome of Sphingomonas wittichii RW1." Copeland A., Lucas S., Lapidus A., Barry K., Glavina del Rio T., Dalin E., Tice H., Pitluck S., Saunders E., Brettin T., Bruce D., Detter J.C., Han C., Tapia R., Gilna P., Schmutz J., Larimer F., Land M. , Hauser L., Kyrpides N., Kim E., Halden R.U., Miller T.R., Salzberg S.L., Eisen J.A., Richardson P. Submitted (MAY-2007) to the EMBL/GenBank/DDBJ databases Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: RW1 / DSM 6014 / JCM 10273.

Cross-references

Sequence databases
EMBL GenBank DDBJ	CP000699 Genomic DNA. Translation: ABQ70651.1.
RefSeq	YP_001264789.1. NC_009511.1.
3D structure databases
ProteinModelPortal	A5VED5.
ModBase	Search...
Protein-protein interaction databases
STRING	A5VED5.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
GeneID	5198252.
GenomeReviews	Gene locus Swit_4311 in contig CP000699_GR.
KEGG	swi:Swit_4311.
NMPDR	fig|392499.4.peg.4370.
PATRIC	23687921. VBISphWit55028_4888.
Organism-specific databases
CMR	Search...
Phylogenomic databases
eggNOG	NOG08474.
HOGENOM	HBG646798.
OMA	ISHWPAT.
ProtClustDB	CLSK972638.
Family and domain databases
InterPro	IPR004183. Xdiol_dOase_suB. [Graphical view]
Gene3D	G3DSA:3.40.830.10. Xdiol_dOase_3B. 1 hit.
KO	K05713.
Pfam	PF02900. LigB. 1 hit. [Graphical view]
SUPFAM	SSF53213. Xdiol_dOase_3B. 1 hit.
ProtoNet	Search...

Entry information

Entry name

A5VED5_SPHWW

Accession

Primary (citable) accession number: A5VED5

Entry history

Integrated into UniProtKB/TrEMBL:	July 10, 2007
Last sequence update:	July 10, 2007
Last modified:	December 14, 2011
This is version 26 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)