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A5VE35 (A5VE35_SPHWW) Unreviewed, UniProtKB/TrEMBL

Last modified November 13, 2013. Version 43. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein names
EC=2.6.1.19 EMBL ABQ70551.1
Gene names
Ordered Locus Names:Swit_4211 EMBL ABQ70551.1
OrganismSphingomonas wittichii (strain RW1 / DSM 6014 / JCM 10273) [Complete proteome] [HAMAP] EMBL ABQ70551.1
Taxonomic identifier392499 [NCBI]
Taxonomic lineageBacteriaProteobacteriaAlphaproteobacteriaSphingomonadalesSphingomonadaceaeSphingomonas

Protein attributes

Sequence length425 AA.
Sequence statusComplete.
Sequence processingThe displayed sequence is further processed into a mature form.
Protein existenceInferred from homology

General annotation (Comments)

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Molecule processing

Signal peptide1 – 3131 Potential EMBL ABQ70551.1
Chain32 – 425394 Potential EMBL ABQ70551.1
PRO_5000251163

Sequences

Sequence LengthMass (Da)Tools
A5VE35 [UniParc].

Last modified July 10, 2007. Version 1.
Checksum: F598CD0D73940FED

FASTA42544,891
        10         20         30         40         50         60 
MTSNADLLAR RRQAVARGVA TAFPIFAARA DNAEIWDVDG QHYVDFAGGI AVLNTGHRHP 

        70         80         90        100        110        120 
KVIAAVQEQL ALYTHMAFQV AAYEPYVALA ERLNALAPFT GEAKTILFTT GAEATENAVK 

       130        140        150        160        170        180 
LARAATGRSA VIAFGGGFHG RTLLAMAMTG KVAPYKQQFG PMPGEIFHVP FPVAAHGGSV 

       190        200        210        220        230        240 
EETLRAIEMV FRVAVEPGRV AALIIEPILG EGGFYEAPVE LLRALRALCD RHGIILIADE 

       250        260        270        280        290        300 
VQTGFGRTGR MFAIEHSGVE PDLVTVAKSL AGGFPLSGVI GRSAIMEASE PGGMGGTYGG 

       310        320        330        340        350        360 
NPVACAAALA VLDVIAEEQL LDRAVAIGAR IKERLRLLAR RNDLVPITEI RGPGAMIGFD 

       370        380        390        400        410        420 
IVTSRTGYEP DPETTRRVVE AAREAGLILL SCGIHGNVIR ILVPLTVPDD ILDAGLAKLE 


QALAA 

« Hide

References

[1]"Complete sequence of chromosome of Sphingomonas wittichii RW1."
US DOE Joint Genome Institute
Copeland A., Lucas S., Lapidus A., Barry K., Glavina del Rio T., Dalin E., Tice H., Pitluck S., Saunders E., Brettin T., Bruce D., Detter J.C., Han C., Tapia R., Gilna P., Schmutz J., Larimer F., Land M. expand/collapse author list , Hauser L., Kyrpides N., Kim E., Halden R.U., Miller T.R., Salzberg S.L., Eisen J.A., Richardson P.
Submitted (MAY-2007) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: RW1 / DSM 6014 / JCM 10273.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
CP000699 Genomic DNA. Translation: ABQ70551.1.
RefSeqYP_001264689.1. NC_009511.1.

3D structure databases

ProteinModelPortalA5VE35.
SMRA5VE35. Positions 3-424.
ModBaseSearch...
MobiDBSearch...

Protein-protein interaction databases

STRING392499.Swit_4211.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaABQ70551; ABQ70551; Swit_4211.
GeneID5199630.
KEGGswi:Swit_4211.
PATRIC23687723. VBISphWit55028_4789.

Organism-specific databases

CMRSearch...

Phylogenomic databases

eggNOGCOG0160.
HOGENOMHOG000020206.
KOK07250.
OMAASKSAYR.
OrthoDBEOG6QVRHN.
ProtClustDBCLSK971284.

Enzyme and pathway databases

BioCycSWIT392499:GHZK-4261-MONOMER.

Family and domain databases

Gene3D3.40.640.10. 1 hit.
3.90.1150.10. 1 hit.
InterProIPR004632. 4NH2But_aminotransferase_bac.
IPR005814. Aminotrans_3.
IPR015424. PyrdxlP-dep_Trfase.
IPR015421. PyrdxlP-dep_Trfase_major_sub1.
IPR015422. PyrdxlP-dep_Trfase_major_sub2.
[Graphical view]
PANTHERPTHR11986. PTHR11986. 1 hit.
PfamPF00202. Aminotran_3. 1 hit.
[Graphical view]
PIRSFPIRSF000521. Transaminase_4ab_Lys_Orn. 1 hit.
SUPFAMSSF53383. SSF53383. 1 hit.
TIGRFAMsTIGR00700. GABAtrnsam. 1 hit.
PROSITEPS00600. AA_TRANSFER_CLASS_3. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameA5VE35_SPHWW
AccessionPrimary (citable) accession number: A5VE35
Entry history
Integrated into UniProtKB/TrEMBL: July 10, 2007
Last sequence update: July 10, 2007
Last modified: November 13, 2013
This is version 43 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)