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A5VE35

- A5VE35_SPHWW

UniProt

A5VE35 - A5VE35_SPHWW

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Protein
Submitted name: 4-aminobutyrate aminotransferase
Gene
Swit_4211
Organism
Sphingomonas wittichii (strain RW1 / DSM 6014 / JCM 10273)
Status
Unreviewed - Annotation score: 1 out of 5 - Protein inferred from homologyi

Functioni

GO - Molecular functioni

  1. 4-aminobutyrate transaminase activity Source: UniProtKB-EC
  2. pyridoxal phosphate binding Source: InterPro
Complete GO annotation...

GO - Biological processi

  1. gamma-aminobutyric acid metabolic process Source: InterPro
Complete GO annotation...

Keywords - Molecular functioni

AminotransferaseImported, Transferase

Keywords - Ligandi

Pyridoxal phosphateUniRule annotation

Enzyme and pathway databases

BioCyciSWIT392499:GHZK-4261-MONOMER.

Names & Taxonomyi

Protein namesi
Submitted name:
4-aminobutyrate aminotransferaseImported (EC:2.6.1.19Imported)
Gene namesi
Ordered Locus Names:Swit_4211Imported
OrganismiSphingomonas wittichii (strain RW1 / DSM 6014 / JCM 10273)Imported
Taxonomic identifieri392499 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaAlphaproteobacteriaSphingomonadalesSphingomonadaceaeSphingomonas
ProteomesiUP000001989: Chromosome

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Signal peptidei1 – 3131 PredictedImported
Add
BLAST
Chaini32 – 425394 PredictedImported
PRO_5000251163Add
BLAST

Interactioni

Protein-protein interaction databases

STRINGi392499.Swit_4211.

Structurei

3D structure databases

ProteinModelPortaliA5VE35.
SMRiA5VE35. Positions 3-424.

Family & Domainsi

Sequence similaritiesi

Keywords - Domaini

SignalImported

Phylogenomic databases

eggNOGiCOG0160.
HOGENOMiHOG000020206.
KOiK07250.
OMAiVMCDFFA.
OrthoDBiEOG6QVRHN.

Family and domain databases

Gene3Di3.40.640.10. 1 hit.
3.90.1150.10. 1 hit.
InterProiIPR004632. 4NH2But_aminotransferase_bac.
IPR005814. Aminotrans_3.
IPR015424. PyrdxlP-dep_Trfase.
IPR015421. PyrdxlP-dep_Trfase_major_sub1.
IPR015422. PyrdxlP-dep_Trfase_major_sub2.
[Graphical view]
PANTHERiPTHR11986. PTHR11986. 1 hit.
PfamiPF00202. Aminotran_3. 1 hit.
[Graphical view]
PIRSFiPIRSF000521. Transaminase_4ab_Lys_Orn. 1 hit.
SUPFAMiSSF53383. SSF53383. 1 hit.
TIGRFAMsiTIGR00700. GABAtrnsam. 1 hit.
PROSITEiPS00600. AA_TRANSFER_CLASS_3. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

Sequence processingi: The displayed sequence is further processed into a mature form.

A5VE35-1 [UniParc]FASTAAdd to Basket

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MTSNADLLAR RRQAVARGVA TAFPIFAARA DNAEIWDVDG QHYVDFAGGI    50
AVLNTGHRHP KVIAAVQEQL ALYTHMAFQV AAYEPYVALA ERLNALAPFT 100
GEAKTILFTT GAEATENAVK LARAATGRSA VIAFGGGFHG RTLLAMAMTG 150
KVAPYKQQFG PMPGEIFHVP FPVAAHGGSV EETLRAIEMV FRVAVEPGRV 200
AALIIEPILG EGGFYEAPVE LLRALRALCD RHGIILIADE VQTGFGRTGR 250
MFAIEHSGVE PDLVTVAKSL AGGFPLSGVI GRSAIMEASE PGGMGGTYGG 300
NPVACAAALA VLDVIAEEQL LDRAVAIGAR IKERLRLLAR RNDLVPITEI 350
RGPGAMIGFD IVTSRTGYEP DPETTRRVVE AAREAGLILL SCGIHGNVIR 400
ILVPLTVPDD ILDAGLAKLE QALAA 425
Length:425
Mass (Da):44,891
Last modified:July 10, 2007 - v1
Checksum:iF598CD0D73940FED
GO

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
CP000699 Genomic DNA. Translation: ABQ70551.1.
RefSeqiWP_012050389.1. NC_009511.1.
YP_001264689.1. NC_009511.1.

Genome annotation databases

EnsemblBacteriaiABQ70551; ABQ70551; Swit_4211.
GeneIDi5199630.
KEGGiswi:Swit_4211.
PATRICi23687723. VBISphWit55028_4789.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
CP000699 Genomic DNA. Translation: ABQ70551.1 .
RefSeqi WP_012050389.1. NC_009511.1.
YP_001264689.1. NC_009511.1.

3D structure databases

ProteinModelPortali A5VE35.
SMRi A5VE35. Positions 3-424.
ModBasei Search...

Protein-protein interaction databases

STRINGi 392499.Swit_4211.

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

EnsemblBacteriai ABQ70551 ; ABQ70551 ; Swit_4211 .
GeneIDi 5199630.
KEGGi swi:Swit_4211.
PATRICi 23687723. VBISphWit55028_4789.

Phylogenomic databases

eggNOGi COG0160.
HOGENOMi HOG000020206.
KOi K07250.
OMAi VMCDFFA.
OrthoDBi EOG6QVRHN.

Enzyme and pathway databases

BioCyci SWIT392499:GHZK-4261-MONOMER.

Family and domain databases

Gene3Di 3.40.640.10. 1 hit.
3.90.1150.10. 1 hit.
InterProi IPR004632. 4NH2But_aminotransferase_bac.
IPR005814. Aminotrans_3.
IPR015424. PyrdxlP-dep_Trfase.
IPR015421. PyrdxlP-dep_Trfase_major_sub1.
IPR015422. PyrdxlP-dep_Trfase_major_sub2.
[Graphical view ]
PANTHERi PTHR11986. PTHR11986. 1 hit.
Pfami PF00202. Aminotran_3. 1 hit.
[Graphical view ]
PIRSFi PIRSF000521. Transaminase_4ab_Lys_Orn. 1 hit.
SUPFAMi SSF53383. SSF53383. 1 hit.
TIGRFAMsi TIGR00700. GABAtrnsam. 1 hit.
PROSITEi PS00600. AA_TRANSFER_CLASS_3. 1 hit.
[Graphical view ]
ProtoNeti Search...

Publicationsi

  1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: RW1 / DSM 6014 / JCM 10273.

Entry informationi

Entry nameiA5VE35_SPHWW
AccessioniPrimary (citable) accession number: A5VE35
Entry historyi
Integrated into UniProtKB/TrEMBL: July 10, 2007
Last sequence update: July 10, 2007
Last modified: September 3, 2014
This is version 45 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome

External Data

Dasty 3

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