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A5VBN3 (A5VBN3_SPHWW) Unreviewed, UniProtKB/TrEMBL

Last modified June 11, 2014. Version 42. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein names
Gene names
Ordered Locus Names:Swit_3353 EMBL ABQ69699.1
OrganismSphingomonas wittichii (strain RW1 / DSM 6014 / JCM 10273) [Complete proteome] [HAMAP] EMBL ABQ69699.1
Taxonomic identifier392499 [NCBI]
Taxonomic lineageBacteriaProteobacteriaAlphaproteobacteriaSphingomonadalesSphingomonadaceaeSphingomonas

Protein attributes

Sequence length314 AA.
Sequence statusComplete.
Protein existencePredicted

Sequences

Sequence LengthMass (Da)Tools
A5VBN3 [UniParc].

Last modified July 10, 2007. Version 1.
Checksum: 60EC48D840F43EFA

FASTA31433,700
        10         20         30         40         50         60 
MSGAGAGAEC GAAAIPILDP AALGQADWAA ADLIVHGSAR AALDAMPAGS AHVAVTSPPY 

        70         80         90        100        110        120 
FGQRDYGVAG QIGIEPDPDA YVAALVAVFR ALRRVLRDDG TLWLNLGDKY AGGALLGMPW 

       130        140        150        160        170        180 
RVALALVADG WRLRSDIVWH KPNAMPHSNK RRPTHDHEYV FLLSKTDDYR YDADAIREPH 

       190        200        210        220        230        240 
RTFGPDSRMR GGRGHFGRRG GTPEQGKNRG DANLHDGRWD QAFHPLGRNR RTVWSVPLGK 

       250        260        270        280        290        300 
YRDAHFAVFP PALITPCIRA GSPEGGVVLD PFFGAGTTGL VARAEGRRFV GIELNPDYCA 

       310 
MARDRILAGG SAPA 

« Hide

References

[1]"Complete sequence of chromosome of Sphingomonas wittichii RW1."
US DOE Joint Genome Institute
Copeland A., Lucas S., Lapidus A., Barry K., Glavina del Rio T., Dalin E., Tice H., Pitluck S., Saunders E., Brettin T., Bruce D., Detter J.C., Han C., Tapia R., Gilna P., Schmutz J., Larimer F., Land M. expand/collapse author list , Hauser L., Kyrpides N., Kim E., Halden R.U., Miller T.R., Salzberg S.L., Eisen J.A., Richardson P.
Submitted (MAY-2007) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: RW1 / DSM 6014 / JCM 10273.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
CP000699 Genomic DNA. Translation: ABQ69699.1.
RefSeqYP_001263837.1. NC_009511.1.

3D structure databases

ProteinModelPortalA5VBN3.
ModBaseSearch...
MobiDBSearch...

Protein-protein interaction databases

STRING392499.Swit_3353.

Protein family/group databases

REBASE15466. M.SwiRWORF3353P.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaABQ69699; ABQ69699; Swit_3353.
GeneID5199235.
KEGGswi:Swit_3353.
PATRIC23685935. VBISphWit55028_3909.

Organism-specific databases

CMRSearch...

Phylogenomic databases

eggNOGCOG0863.
HOGENOMHOG000161821.
KOK07319.
OMADGWYLRQ.
OrthoDBEOG6HMXBJ.

Enzyme and pathway databases

BioCycSWIT392499:GHZK-3389-MONOMER.

Family and domain databases

Gene3D3.40.50.150. 2 hits.
InterProIPR002941. DNA_methylase_N4/N6.
IPR017985. MeTrfase_CN4_CS.
IPR001091. RM_Methylase.
IPR029063. SAM-dependent_MTases-like.
[Graphical view]
PfamPF01555. N6_N4_Mtase. 1 hit.
[Graphical view]
PRINTSPR00508. S21N4MTFRASE.
SUPFAMSSF53335. SSF53335. 2 hits.
PROSITEPS00093. N4_MTASE. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameA5VBN3_SPHWW
AccessionPrimary (citable) accession number: A5VBN3
Entry history
Integrated into UniProtKB/TrEMBL: July 10, 2007
Last sequence update: July 10, 2007
Last modified: June 11, 2014
This is version 42 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)