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A5VAS1 (A5VAS1_SPHWW) Unreviewed, UniProtKB/TrEMBL

Last modified May 29, 2013. Version 46. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein namesRecommended name:
Dihydroxy-acid dehydratase HAMAP-Rule MF_00012
Short name=DAD HAMAP-Rule MF_00012
EC=4.2.1.9 HAMAP-Rule MF_00012
Gene names
Name:ilvD HAMAP-Rule MF_00012
Ordered Locus Names:Swit_3037 EMBL ABQ69387.1
OrganismSphingomonas wittichii (strain RW1 / DSM 6014 / JCM 10273) [Complete proteome] [HAMAP] EMBL ABQ69387.1
Taxonomic identifier392499 [NCBI]
Taxonomic lineageBacteria › Proteobacteria › Alphaproteobacteria › Sphingomonadales › Sphingomonadaceae › Sphingomonas ›

Protein attributes

Sequence length618 AA.
Sequence statusComplete.
Protein existenceInferred from homology

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Sites

Metal binding1221Iron-sulfur (4Fe-4S) By similarity HAMAP-Rule MF_00012
Metal binding1961Iron-sulfur (4Fe-4S) By similarity HAMAP-Rule MF_00012

Sequences

Sequence LengthMass (Da)Tools
A5VAS1 [UniParc].

Last modified July 10, 2007. Version 1.
Checksum: AB211610947573E5

FASTA61865,813
        10         20         30         40         50         60 
MPAYRSRTST HGRNMAGARA LWRATGIKDG DFGKPIIAIA NSFTQFVPGH IHLKDLGQMV 

        70         80         90        100        110        120 
AREIEAHGGI AKEFNTIAVD DGIAQGHLGM LYSLPSREII ADAVEYMVNA HCADALVCIS 

       130        140        150        160        170        180 
NCDKITPGML MAALRLNVPT VFVSGGPMEA GKIVAADGKL RVIDTVDPMV LAGDPTVSDE 

       190        200        210        220        230        240 
EVEAYEKSAC PTCGSCAGMF TANSMNCLTE ALGLSLPGNG TTLATHADRR SLFLEAARTI 

       250        260        270        280        290        300 
MRITRRYYEE EDGSILPRGI AGFAAFENAM RLDMAMGGST NTILHLLAAA REAEVDFTMA 

       310        320        330        340        350        360 
DIDRLSRDTP CLCKVAPNNS NVHIEDIHRA GGIMSILGQI DRAGLLNRDC ATIHSPTLAE 

       370        380        390        400        410        420 
ALDRWDISRT DDAEVESFYK AAPGGVRTTE AFSQAKRWSE LDTDRETGVI RSADHAFFKD 

       430        440        450        460        470        480 
GGLAVLYGNI ARDGCIVKTA GVDEAILKFS GSAVICESQD DAVAKILGDK VKAGDVVVVR 

       490        500        510        520        530        540 
YEGPKGGPGM QEMLYPTSYL KARGLGKACA LITDGRFSGA TSGLSIGHVS PEAAEGGAIG 

       550        560        570        580        590        600 
LIEDGDIIEI DIPARRIDVR LSEAELAARR AAMEARGTVA WQPVDRDRPV SMALRAYAAL 

       610 
TTSAAHGAVR DATQLARR

« Hide

References

[1]"Complete sequence of chromosome of Sphingomonas wittichii RW1."
US DOE Joint Genome Institute
Copeland A., Lucas S., Lapidus A., Barry K., Glavina del Rio T., Dalin E., Tice H., Pitluck S., Saunders E., Brettin T., Bruce D., Detter J.C., Han C., Tapia R., Gilna P., Schmutz J., Larimer F., Land M. expand/collapse author list , Hauser L., Kyrpides N., Kim E., Halden R.U., Miller T.R., Salzberg S.L., Eisen J.A., Richardson P.
Submitted (MAY-2007) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: RW1 / DSM 6014 / JCM 10273.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ		CP000699 Genomic DNA. Translation: ABQ69387.1.
RefSeqYP_001263525.1. NC_009511.1.

3D structure databases

ModBaseSearch...

Protein-protein interaction databases

STRING392499.Swit_3037.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaABQ69387; ABQ69387; Swit_3037.
GeneID5198274.
KEGGswi:Swit_3037.
PATRIC23685271. VBISphWit55028_3578.

Organism-specific databases

CMRSearch...

Phylogenomic databases

eggNOGCOG0129.
HOGENOMHOG000173155.
KOK01687.
OMARNDARTE.
ProtClustDBPRK12448.

Enzyme and pathway databases

BioCycSWIT392499:GHZK-3072-MONOMER.
UniPathwayUPA00047; UER00057.
UPA00049; UER00061.

Family and domain databases

HAMAPMF_00012. IlvD.
InterProIPR015928. Aconitase/3IPM_dehydase_swvl.
IPR004404. DihydroxyA_deHydtase.
IPR000581. DiOHA_6PGluconate_deHydtase.
IPR020558. DiOHA_6PGluconate_deHydtase_CS.
[Graphical view]
PANTHERPTHR21000. PTHR21000. 1 hit.
PfamPF00920. ILVD_EDD. 1 hit.
[Graphical view]
SUPFAMSSF52016. Aconitase/3IPM_dehydase_swvl. 1 hit.
TIGRFAMsTIGR00110. ilvD. 1 hit.
PROSITEPS00886. ILVD_EDD_1. 1 hit.
PS00887. ILVD_EDD_2. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameA5VAS1_SPHWW
AccessionPrimary (citable) accession number: A5VAS1
Entry history
Integrated into UniProtKB/TrEMBL: July 10, 2007
Last sequence update: July 10, 2007
Last modified: May 29, 2013
This is version 46 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)
to top of pageNames·Attributes·General annotation·Ontologies·Sequence annotation·Sequences·References·Cross-refs·Entry info