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A5V6D4 (A5V6D4_SPHWW) Unreviewed, UniProtKB/TrEMBL

Last modified April 16, 2014. Version 44. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein names
Gene names
Ordered Locus Names:Swit_1487 EMBL ABQ67850.1
OrganismSphingomonas wittichii (strain RW1 / DSM 6014 / JCM 10273) [Complete proteome] [HAMAP] EMBL ABQ67850.1
Taxonomic identifier392499 [NCBI]
Taxonomic lineageBacteriaProteobacteriaAlphaproteobacteriaSphingomonadalesSphingomonadaceaeSphingomonas

Protein attributes

Sequence length535 AA.
Sequence statusComplete.
Sequence processingThe displayed sequence is further processed into a mature form.
Protein existencePredicted

Ontologies

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Molecule processing

Signal peptide1 – 3131 Potential EMBL ABQ67850.1
Chain32 – 535504 Potential EMBL ABQ67850.1
PRO_5000250662

Sequences

Sequence LengthMass (Da)Tools
A5V6D4 [UniParc].

Last modified July 10, 2007. Version 1.
Checksum: 6531A442866319FB

FASTA53559,318
        10         20         30         40         50         60 
MTEIERRRRF GLRPQLLLLL FVLNLVAAVA YSTMLYSIDR REIISGIDDR LMTAVHAARE 

        70         80         90        100        110        120 
IIPQGYHRRI QGPDSIPTAE FDRLQARLSR FSNRSNLVYV YSYMRFGPHI YTVATSATQR 

       130        140        150        160        170        180 
EIREGTETGF FTRYDTAPDK LYRSFQDGRI RFDEYEDSFG RFRSIYMPVR SPDGRIHVIG 

       190        200        210        220        230        240 
ADIALDSLDQ RLAGALRTSI LVGFATFVLS MVVGSLLITR ITGPLERLTS YTRNIEERSF 

       250        260        270        280        290        300 
QSNEEEMRAM QAISGSRADE VGSLAEAMSG MISRLQRYLI EIQAATAARE RVEGELSAAR 

       310        320        330        340        350        360 
DIQIGMVPRR FPPFPERDDI DIYALLEPAK EVGGDLYNYV MIDENRLFFV IGDVSGKGVP 

       370        380        390        400        410        420 
AALFMAMTST LFKANALSAV STADLMARVN AELARDNAAN LFVTAFAGII DLRDGTVAYS 

       430        440        450        460        470        480 
DAGHEAPYLL RADGRVTRLD KPEGMALGVF DDVAFDGAVV RLDKGDALVL FTDGVSEATR 

       490        500        510        520        530 
ADEAQFTVEG IVETLAALPA DRTARSIATS LADRVGAFVG TAPQFDDIAI LVVRR 

« Hide

References

[1]"Complete sequence of chromosome of Sphingomonas wittichii RW1."
US DOE Joint Genome Institute
Copeland A., Lucas S., Lapidus A., Barry K., Glavina del Rio T., Dalin E., Tice H., Pitluck S., Saunders E., Brettin T., Bruce D., Detter J.C., Han C., Tapia R., Gilna P., Schmutz J., Larimer F., Land M. expand/collapse author list , Hauser L., Kyrpides N., Kim E., Halden R.U., Miller T.R., Salzberg S.L., Eisen J.A., Richardson P.
Submitted (MAY-2007) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: RW1 / DSM 6014 / JCM 10273.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
CP000699 Genomic DNA. Translation: ABQ67850.1.
RefSeqYP_001261988.1. NC_009511.1.

3D structure databases

ModBaseSearch...
MobiDBSearch...

Protein-protein interaction databases

STRING392499.Swit_1487.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaABQ67850; ABQ67850; Swit_1487.
GeneID5200028.
KEGGswi:Swit_1487.
PATRIC23682060. VBISphWit55028_1988.

Organism-specific databases

CMRSearch...

Phylogenomic databases

eggNOGCOG2208.
KOK07315.
OMAASESAFH.
OrthoDBEOG66QKXZ.

Enzyme and pathway databases

BioCycSWIT392499:GHZK-1507-MONOMER.

Family and domain databases

Gene3D3.60.40.10. 1 hit.
InterProIPR003660. HAMP_linker_domain.
IPR001932. PP2C-like_dom.
[Graphical view]
PfamPF00672. HAMP. 1 hit.
PF07228. SpoIIE. 1 hit.
[Graphical view]
SMARTSM00304. HAMP. 1 hit.
SM00331. PP2C_SIG. 1 hit.
SM00332. PP2Cc. 1 hit.
[Graphical view]
SUPFAMSSF81606. SSF81606. 1 hit.
PROSITEPS50885. HAMP. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameA5V6D4_SPHWW
AccessionPrimary (citable) accession number: A5V6D4
Entry history
Integrated into UniProtKB/TrEMBL: July 10, 2007
Last sequence update: July 10, 2007
Last modified: April 16, 2014
This is version 44 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)